Wall clock time and date at job start Mon Mar 30 2020 01:03:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30859 * 125.77809 * 2 1 4 4 N 1.40075 * 108.41813 * 179.77976 * 3 2 1 5 5 C 1.46494 * 126.09487 * 180.27496 * 4 3 2 6 6 C 1.35865 * 107.81022 * 0.41928 * 4 3 2 7 7 N 1.39541 * 126.26338 * 179.84964 * 6 4 3 8 8 C 1.34779 * 120.00001 * 330.81754 * 7 6 4 9 9 O 1.21289 * 120.00088 * 354.11935 * 8 7 6 10 10 C 1.50697 * 119.99827 * 173.83907 * 8 7 6 11 11 H 1.09007 * 109.47491 * 299.99885 * 10 8 7 12 12 C 1.53005 * 109.47435 * 60.00224 * 10 8 7 13 13 C 1.50699 * 109.47346 * 180.02562 * 10 8 7 14 14 H 1.08002 * 119.99807 * 0.02562 * 13 10 8 15 15 C 1.37873 * 120.00783 * 179.97438 * 13 10 8 16 16 N 1.31517 * 119.99364 * 0.02562 * 15 13 10 17 17 Si 1.86799 * 120.00663 * 179.97438 * 15 13 10 18 18 H 1.48504 * 109.46715 * 0.02562 * 17 15 13 19 19 H 1.48493 * 109.47185 * 119.99941 * 17 15 13 20 20 H 1.48495 * 109.47362 * 240.00515 * 17 15 13 21 21 C 1.36150 * 107.47279 * 359.58630 * 6 4 3 22 22 Cl 1.73599 * 126.07632 * 180.28050 * 21 6 4 23 23 H 1.09001 * 109.46879 * 269.95716 * 1 2 3 24 24 H 1.08994 * 109.46863 * 29.96082 * 1 2 3 25 25 H 1.09000 * 109.46628 * 149.95585 * 1 2 3 26 26 H 1.09003 * 109.47230 * 272.06441 * 5 4 3 27 27 H 1.08999 * 109.47439 * 32.05891 * 5 4 3 28 28 H 1.08998 * 109.47897 * 152.06290 * 5 4 3 29 29 H 0.97001 * 120.00058 * 150.82423 * 7 6 4 30 30 H 1.08995 * 109.46642 * 299.99966 * 12 10 8 31 31 H 1.09000 * 109.46571 * 59.99868 * 12 10 8 32 32 H 1.08996 * 109.46895 * 179.97438 * 12 10 8 33 33 H 0.97008 * 119.99589 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2721 1.0616 0.0000 4 7 3.6090 0.6437 0.0051 5 6 4.7859 1.5160 0.0125 6 6 3.6197 -0.7149 -0.0013 7 7 4.7513 -1.5314 -0.0021 8 6 5.8956 -1.0966 -0.5661 9 8 5.9138 -0.0426 -1.1659 10 6 7.1539 -1.9171 -0.4461 11 1 7.4091 -2.0393 0.6066 12 6 6.9288 -3.2917 -1.0793 13 6 8.2815 -1.2146 -1.1574 14 1 8.1047 -0.2683 -1.6470 15 6 9.5391 -1.7792 -1.1824 16 7 9.7545 -2.9312 -0.5857 17 14 10.9366 -0.9086 -2.0647 18 1 10.4372 0.3613 -2.6506 19 1 12.0244 -0.6131 -1.0981 20 1 11.4592 -1.7815 -3.1464 21 6 2.3243 -1.1339 -0.0007 22 17 1.7835 -2.7835 -0.0006 23 1 -0.3633 -0.0008 1.0277 24 1 -0.3633 0.8903 -0.5132 25 1 -0.3632 -0.8896 -0.5145 26 1 5.0604 1.7645 -1.0127 27 1 4.5567 2.4308 0.5591 28 1 5.6163 1.0020 0.4965 29 1 4.7144 -2.4119 0.4032 30 1 6.1134 -3.7997 -0.5644 31 1 6.6738 -3.1695 -2.1319 32 1 7.8391 -3.8849 -0.9928 33 1 10.6394 -3.3283 -0.6029 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000892124326.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:03:16 Heat of formation + Delta-G solvation = 37.371902 kcal Electronic energy + Delta-G solvation = -18855.355845 eV Core-core repulsion = 15751.152408 eV Total energy + Delta-G solvation = -3104.203437 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.44641 -39.10421 -36.28975 -34.61699 -34.14652 -33.28187 -30.74625 -29.59555 -28.53409 -25.34084 -25.21137 -23.51463 -20.80720 -20.75939 -18.85678 -17.59792 -16.60687 -16.26388 -15.77276 -15.41507 -14.77953 -14.48709 -13.83313 -13.46999 -13.30553 -13.21365 -12.77241 -12.58680 -12.36350 -12.17096 -11.64219 -11.38883 -11.28513 -11.13194 -10.90252 -10.81201 -10.58387 -10.41706 -10.12777 -10.11124 -9.16195 -8.97855 -8.65113 -8.50820 -7.90514 -6.18813 -4.23870 1.80688 2.07783 2.55623 2.80980 3.22841 3.27368 3.31901 3.37862 3.47801 4.33895 4.60256 4.97138 5.15047 5.30665 5.39339 5.57101 5.63667 5.74346 5.79017 5.89504 6.08922 6.21044 6.44110 6.55719 6.63185 6.70886 7.09026 7.26673 7.46065 7.62884 7.80574 7.90870 8.10871 8.65863 8.84840 9.42742 10.88637 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.031353 B = 0.005164 C = 0.004542 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 892.853669 B = 5420.606979 C = 6163.741128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C 0.101 3.899 3 N -0.289 5.289 4 N -0.357 5.357 5 C 0.122 3.878 6 C 0.353 3.647 7 N -0.660 5.660 8 C 0.514 3.486 9 O -0.517 6.517 10 C 0.035 3.965 11 H 0.060 0.940 12 C -0.136 4.136 13 C -0.507 4.507 14 H 0.076 0.924 15 C 0.061 3.939 16 N -0.892 5.892 17 Si 0.902 3.098 18 H -0.271 1.271 19 H -0.283 1.283 20 H -0.283 1.283 21 C -0.230 4.230 22 Cl -0.047 7.047 23 H 0.079 0.921 24 H 0.075 0.925 25 H 0.079 0.921 26 H 0.095 0.905 27 H 0.071 0.929 28 H 0.089 0.911 29 H 0.423 0.577 30 H 0.014 0.986 31 H 0.035 0.965 32 H 0.098 0.902 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.666 1.358 3.468 14.164 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.066 4.066 3 N -0.113 5.113 4 N -0.142 5.142 5 C -0.018 4.018 6 C 0.128 3.872 7 N -0.312 5.312 8 C 0.306 3.694 9 O -0.390 6.390 10 C 0.014 3.986 11 H 0.077 0.923 12 C -0.194 4.194 13 C -0.546 4.546 14 H 0.094 0.906 15 C -0.140 4.140 16 N -0.531 5.531 17 Si 0.729 3.271 18 H -0.195 1.195 19 H -0.209 1.209 20 H -0.209 1.209 21 C -0.272 4.272 22 Cl -0.019 7.019 23 H 0.097 0.903 24 H 0.094 0.906 25 H 0.098 0.902 26 H 0.113 0.887 27 H 0.089 0.911 28 H 0.108 0.892 29 H 0.263 0.737 30 H 0.033 0.967 31 H 0.054 0.946 32 H 0.116 0.884 33 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -13.246 3.220 3.057 13.970 hybrid contribution 0.872 -1.167 -0.242 1.477 sum -12.374 2.053 2.816 12.856 Atomic orbital electron populations 1.20190 0.86138 1.03518 1.03147 1.21908 0.97037 0.88585 0.99024 1.77438 0.85353 1.21077 1.27426 1.48455 1.06129 1.02519 1.57122 1.22212 0.82366 0.92440 1.04795 1.17706 0.87928 0.83449 0.98152 1.43797 1.08621 1.19300 1.59501 1.22614 0.84258 0.86648 0.75884 1.90627 1.85071 1.23556 1.39729 1.18951 0.87281 0.92654 0.99711 0.92278 1.21796 1.01608 0.97577 0.98468 1.21100 0.92169 1.06966 1.34343 0.90579 1.24941 0.98759 0.94970 0.95344 1.69870 1.22515 1.17147 1.43582 0.86363 0.81541 0.79823 0.79340 1.19541 1.20943 1.20921 1.19752 0.90638 0.87097 1.29683 1.98284 1.89600 1.15856 1.98122 0.90282 0.90617 0.90205 0.88678 0.91067 0.89202 0.73746 0.96652 0.94607 0.88359 0.92754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.74 10.30 36.01 0.37 -0.37 16 2 C 0.10 1.51 7.20 -82.43 -0.59 0.92 16 3 N -0.29 -4.89 12.56 33.66 0.42 -4.47 16 4 N -0.36 -6.34 3.99 -67.00 -0.27 -6.61 16 5 C 0.12 2.02 9.24 59.84 0.55 2.57 16 6 C 0.35 6.18 7.33 -152.53 -1.12 5.06 16 7 N -0.66 -11.50 5.34 -11.30 -0.06 -11.56 16 8 C 0.51 10.64 6.16 -10.99 -0.07 10.57 16 9 O -0.52 -11.65 10.45 5.55 0.06 -11.60 16 10 C 0.04 0.80 2.65 -92.92 -0.25 0.55 16 11 H 0.06 1.38 8.14 -51.92 -0.42 0.96 16 12 C -0.14 -2.93 8.87 37.16 0.33 -2.60 16 13 C -0.51 -13.28 8.37 -34.44 -0.29 -13.57 16 14 H 0.08 2.09 6.75 -52.49 -0.35 1.73 16 15 C 0.06 1.61 5.30 -17.82 -0.09 1.51 16 16 N -0.89 -23.71 11.32 55.43 0.63 -23.08 16 17 Si 0.90 20.71 29.54 -169.99 -5.02 15.69 16 18 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 19 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 20 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 21 C -0.23 -3.63 6.66 -39.76 -0.26 -3.90 16 22 Cl -0.05 -0.62 28.99 -51.86 -1.50 -2.13 16 23 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 24 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 25 H 0.08 0.75 7.99 -51.93 -0.42 0.33 16 26 H 0.09 1.69 6.88 -51.93 -0.36 1.34 16 27 H 0.07 0.99 8.14 -51.93 -0.42 0.56 16 28 H 0.09 1.57 6.18 -51.93 -0.32 1.25 16 29 H 0.42 6.43 8.08 -40.82 -0.33 6.10 16 30 H 0.01 0.26 7.44 -51.93 -0.39 -0.12 16 31 H 0.03 0.77 8.14 -51.93 -0.42 0.35 16 32 H 0.10 2.34 6.07 -51.93 -0.32 2.02 16 33 H 0.26 6.68 8.31 -40.82 -0.34 6.34 16 LS Contribution 294.01 15.07 4.43 4.43 Total: -1.00 -28.65 294.01 -6.46 -35.11 By element: Atomic # 1 Polarization: 7.18 SS G_CDS: -3.73 Total: 3.45 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -1.42 Total: 0.75 kcal Atomic # 7 Polarization: -46.43 SS G_CDS: 0.72 Total: -45.71 kcal Atomic # 8 Polarization: -11.65 SS G_CDS: 0.06 Total: -11.60 kcal Atomic # 14 Polarization: 20.71 SS G_CDS: -5.02 Total: 15.69 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.50 Total: -2.13 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -28.65 -6.46 -35.11 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000892124326.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.478 kcal (2) G-P(sol) polarization free energy of solvation -28.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.106 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds