Wall clock time and date at job start Mon Mar 30 2020 01:28:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.35078 * 125.97560 * 2 1 4 4 C 1.35293 * 107.84188 * 180.02562 * 3 2 1 5 5 Cl 1.73599 * 126.06953 * 179.97438 * 4 3 2 6 6 C 1.40472 * 107.85546 * 0.26831 * 4 3 2 7 7 N 1.40173 * 125.96302 * 179.73985 * 6 4 3 8 8 C 1.34782 * 119.99966 * 179.97438 * 7 6 4 9 9 O 1.21297 * 119.99615 * 359.97438 * 8 7 6 10 10 C 1.50701 * 120.00071 * 179.97438 * 8 7 6 11 11 C 1.52998 * 109.47182 * 179.97438 * 10 8 7 12 12 C 1.52990 * 109.47403 * 179.97438 * 11 10 8 13 13 C 1.50697 * 109.47552 * 180.02562 * 12 11 10 14 14 H 1.08007 * 119.99755 * 0.02562 * 13 12 11 15 15 C 1.37874 * 120.00439 * 180.02562 * 13 12 11 16 16 N 1.31518 * 119.99952 * 359.97438 * 15 13 12 17 17 Si 1.86802 * 120.00281 * 179.97438 * 15 13 12 18 18 H 1.48506 * 109.47169 * 89.99831 * 17 15 13 19 19 H 1.48498 * 109.47312 * 209.99670 * 17 15 13 20 20 H 1.48495 * 109.47057 * 330.00082 * 17 15 13 21 21 N 1.31222 * 108.06550 * 359.55114 * 6 4 3 22 22 H 1.09001 * 109.47551 * 89.99727 * 1 2 3 23 23 H 1.09000 * 109.46766 * 209.99659 * 1 2 3 24 24 H 1.09000 * 109.46878 * 329.99499 * 1 2 3 25 25 H 1.07994 * 126.07953 * 0.04454 * 3 2 1 26 26 H 0.97000 * 120.00741 * 359.97438 * 7 6 4 27 27 H 1.09002 * 109.47212 * 299.99847 * 10 8 7 28 28 H 1.09001 * 109.47267 * 59.99536 * 10 8 7 29 29 H 1.09002 * 109.47197 * 300.00193 * 11 10 8 30 30 H 1.09001 * 109.47124 * 59.99784 * 11 10 8 31 31 H 1.09002 * 109.47266 * 300.00352 * 12 11 10 32 32 H 1.09002 * 109.47491 * 60.00059 * 12 11 10 33 33 H 0.96994 * 119.99834 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2585 1.0931 0.0000 4 6 3.5442 0.6721 -0.0006 5 17 4.9523 1.6875 -0.0014 6 6 3.5374 -0.7326 -0.0072 7 7 4.6679 -1.5613 -0.0150 8 6 4.5214 -2.9011 -0.0203 9 8 3.4112 -3.3897 -0.0179 10 6 5.7368 -3.7920 -0.0293 11 6 5.2954 -5.2569 -0.0333 12 6 6.5292 -6.1614 -0.0431 13 6 6.0945 -7.6043 -0.0477 14 1 5.0431 -7.8515 -0.0444 15 6 7.0387 -8.6089 -0.0560 16 7 8.3190 -8.3079 -0.0605 17 14 6.4998 -10.3974 -0.0610 18 1 6.3506 -10.8656 -1.4624 19 1 7.5210 -11.2241 0.6310 20 1 5.1992 -10.5244 0.6443 21 7 2.2879 -1.1335 -0.0007 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3633 -0.8900 0.5138 24 1 -0.3633 0.8899 0.5139 25 1 1.9257 2.1205 0.0007 26 1 5.5558 -1.1706 -0.0166 27 1 6.3300 -3.5885 -0.9209 28 1 6.3374 -3.5963 0.8590 29 1 4.7025 -5.4602 0.8585 30 1 4.6946 -5.4529 -0.9215 31 1 7.1218 -5.9580 -0.9351 32 1 7.1304 -5.9656 0.8448 33 1 8.9833 -9.0147 -0.0660 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000893933021.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:28:58 Heat of formation + Delta-G solvation = 28.787831 kcal Electronic energy + Delta-G solvation = -17615.368854 eV Core-core repulsion = 14510.793184 eV Total energy + Delta-G solvation = -3104.575671 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.58917 -39.40004 -36.69875 -35.12846 -34.16050 -32.54318 -31.90122 -30.19660 -28.13897 -26.49395 -24.04380 -22.21003 -21.45180 -20.06921 -19.54527 -17.98089 -16.70391 -16.19121 -16.07728 -15.94220 -15.27400 -14.70339 -14.41377 -13.91468 -13.77197 -13.65995 -13.09613 -12.94896 -12.26799 -11.91645 -11.82307 -11.55442 -11.40595 -10.87480 -10.77649 -10.72962 -10.59688 -10.51600 -9.70890 -9.66078 -9.28478 -9.02643 -9.01726 -8.33454 -8.29835 -5.95713 -3.96996 1.49263 1.66853 2.16486 2.37766 3.14232 3.15279 3.36640 3.42354 3.47393 4.20271 4.43578 4.51386 4.84566 4.90781 5.08986 5.13729 5.17534 5.40454 5.53090 5.69102 5.70059 6.22348 6.50708 6.58536 6.72611 6.92379 7.01915 7.17037 7.67553 7.72933 7.85319 8.04926 8.33097 8.48826 9.10024 9.66898 11.15826 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.032517 B = 0.003225 C = 0.002944 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 860.879137 B = 8680.135117 C = 9509.959361 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.106 3.894 2 N -0.370 5.370 3 C 0.088 3.912 4 C -0.210 4.210 5 Cl -0.041 7.041 6 C 0.318 3.682 7 N -0.645 5.645 8 C 0.506 3.494 9 O -0.487 6.487 10 C -0.134 4.134 11 C -0.096 4.096 12 C 0.020 3.980 13 C -0.518 4.518 14 H 0.056 0.944 15 C 0.056 3.944 16 N -0.898 5.898 17 Si 0.892 3.108 18 H -0.281 1.281 19 H -0.287 1.287 20 H -0.273 1.273 21 N -0.262 5.262 22 H 0.078 0.922 23 H 0.094 0.906 24 H 0.090 0.910 25 H 0.185 0.815 26 H 0.420 0.580 27 H 0.094 0.906 28 H 0.094 0.906 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.017 0.983 32 H 0.017 0.983 33 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.044 24.311 0.194 26.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.034 4.034 2 N -0.152 5.152 3 C -0.061 4.061 4 C -0.251 4.251 5 Cl -0.013 7.013 6 C 0.060 3.940 7 N -0.298 5.298 8 C 0.293 3.707 9 O -0.355 6.355 10 C -0.174 4.174 11 C -0.134 4.134 12 C -0.017 4.017 13 C -0.556 4.556 14 H 0.074 0.926 15 C -0.145 4.145 16 N -0.537 5.537 17 Si 0.720 3.280 18 H -0.207 1.207 19 H -0.213 1.213 20 H -0.198 1.198 21 N -0.092 5.092 22 H 0.096 0.904 23 H 0.113 0.887 24 H 0.108 0.892 25 H 0.202 0.798 26 H 0.258 0.742 27 H 0.112 0.888 28 H 0.112 0.888 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.035 0.965 32 H 0.035 0.965 33 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -12.475 22.842 0.204 26.027 hybrid contribution 0.944 0.164 -0.031 0.958 sum -11.531 23.006 0.174 25.734 Atomic orbital electron populations 1.21920 0.72881 1.04870 1.03776 1.48256 1.06851 1.03201 1.56909 1.22111 0.89094 0.94291 1.00617 1.20360 0.89245 0.89397 1.26084 1.98323 1.37967 1.67025 1.97989 1.19205 0.88412 0.87685 0.98719 1.43437 1.06281 1.05948 1.74100 1.21680 0.92943 0.81008 0.75037 1.90777 1.26927 1.73361 1.44473 1.21873 0.94310 0.96882 1.04301 1.21480 1.00506 0.89519 1.01879 1.19130 0.91835 0.93462 0.97234 1.21269 0.92932 0.91273 1.50140 0.92566 1.25017 0.94935 0.99163 0.95395 1.69961 0.99923 1.32641 1.51209 0.86590 0.78374 0.84940 0.78101 1.20685 1.21275 1.19836 1.78277 0.98455 1.04488 1.27963 0.90358 0.88725 0.89179 0.79766 0.74224 0.88805 0.88807 0.92544 0.92552 0.96504 0.96490 0.93070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 0.64 11.47 59.85 0.69 1.33 16 2 N -0.37 -4.00 4.01 -68.14 -0.27 -4.27 16 3 C 0.09 0.79 11.46 -17.17 -0.20 0.59 16 4 C -0.21 -2.36 6.67 -39.79 -0.27 -2.62 16 5 Cl -0.04 -0.39 29.18 -51.86 -1.51 -1.90 16 6 C 0.32 4.60 7.82 -154.35 -1.21 3.39 16 7 N -0.65 -8.97 5.45 -11.11 -0.06 -9.03 16 8 C 0.51 8.65 7.80 -10.98 -0.09 8.56 16 9 O -0.49 -10.31 14.70 5.54 0.08 -10.23 16 10 C -0.13 -2.22 5.70 -27.88 -0.16 -2.38 16 11 C -0.10 -2.08 4.44 -26.74 -0.12 -2.20 16 12 C 0.02 0.53 4.97 -27.89 -0.14 0.39 16 13 C -0.52 -15.09 9.11 -34.44 -0.31 -15.40 16 14 H 0.06 1.62 7.74 -52.48 -0.41 1.21 16 15 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 16 N -0.90 -27.22 13.29 55.43 0.74 -26.48 16 17 Si 0.89 22.18 29.54 -169.99 -5.02 17.16 16 18 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 19 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 20 H -0.27 -6.70 7.11 56.52 0.40 -6.30 16 21 N -0.26 -4.15 10.80 31.46 0.34 -3.81 16 22 H 0.08 0.38 8.14 -51.93 -0.42 -0.04 16 23 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.09 0.23 8.14 -51.93 -0.42 -0.19 16 25 H 0.19 0.84 8.06 -52.49 -0.42 0.41 16 26 H 0.42 4.46 8.69 -40.82 -0.35 4.11 16 27 H 0.09 1.38 8.14 -51.93 -0.42 0.96 16 28 H 0.09 1.38 8.14 -51.93 -0.42 0.96 16 29 H 0.06 1.28 8.10 -51.93 -0.42 0.86 16 30 H 0.06 1.27 8.10 -51.93 -0.42 0.85 16 31 H 0.02 0.45 8.14 -51.93 -0.42 0.03 16 32 H 0.02 0.45 8.14 -51.93 -0.42 0.03 16 33 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 LS Contribution 309.18 15.07 4.66 4.66 Total: -1.00 -36.57 309.18 -7.07 -43.64 By element: Atomic # 1 Polarization: 1.20 SS G_CDS: -4.12 Total: -2.92 kcal Atomic # 6 Polarization: -4.92 SS G_CDS: -1.90 Total: -6.81 kcal Atomic # 7 Polarization: -44.34 SS G_CDS: 0.74 Total: -43.60 kcal Atomic # 8 Polarization: -10.31 SS G_CDS: 0.08 Total: -10.23 kcal Atomic # 14 Polarization: 22.18 SS G_CDS: -5.02 Total: 17.16 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -1.51 Total: -1.90 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -36.57 -7.07 -43.64 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000893933021.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.425 kcal (2) G-P(sol) polarization free energy of solvation -36.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.637 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds