Wall clock time and date at job start Mon Mar 30 2020 01:23:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46506 * 109.47035 * 2 1 4 4 C 1.35082 * 125.97427 * 125.00120 * 3 2 1 5 5 C 1.35279 * 107.83923 * 179.97438 * 4 3 2 6 6 Cl 1.73600 * 126.07111 * 180.02562 * 5 4 3 7 7 C 1.40463 * 107.86151 * 0.02562 * 5 4 3 8 8 N 1.40179 * 125.96938 * 179.97438 * 7 5 4 9 9 C 1.34775 * 120.00196 * 180.02562 * 8 7 5 10 10 O 1.21296 * 120.00254 * 359.97438 * 9 8 7 11 11 C 1.50702 * 120.00202 * 180.02562 * 9 8 7 12 12 C 1.52996 * 109.47013 * 179.97438 * 11 9 8 13 13 C 1.50702 * 109.47013 * 179.97438 * 12 11 9 14 14 H 1.08001 * 119.99739 * 359.97438 * 13 12 11 15 15 C 1.37876 * 120.00404 * 180.02562 * 13 12 11 16 16 N 1.31520 * 119.99758 * 359.97438 * 15 13 12 17 17 Si 1.86800 * 120.00391 * 180.02562 * 15 13 12 18 18 H 1.48488 * 109.47294 * 89.99623 * 17 15 13 19 19 H 1.48503 * 109.47167 * 209.99996 * 17 15 13 20 20 H 1.48502 * 109.46924 * 329.99266 * 17 15 13 21 21 N 1.31234 * 108.06460 * 359.74189 * 7 5 4 22 22 H 1.09004 * 109.47059 * 59.99372 * 1 2 3 23 23 H 1.08992 * 109.47060 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.46930 * 299.99770 * 1 2 3 25 25 H 1.09004 * 109.46930 * 240.00230 * 2 1 3 26 26 H 1.09000 * 109.47312 * 120.00174 * 2 1 3 27 27 H 1.08004 * 126.07794 * 359.97438 * 4 3 2 28 28 H 0.97000 * 120.00127 * 359.97438 * 8 7 5 29 29 H 1.09003 * 109.46940 * 299.99800 * 11 9 8 30 30 H 1.09005 * 109.47099 * 59.99928 * 11 9 8 31 31 H 1.09003 * 109.47219 * 299.99769 * 12 11 9 32 32 H 1.09002 * 109.47631 * 60.00048 * 12 11 9 33 33 H 0.97003 * 119.99691 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 2.8740 1.9204 0.8955 5 6 3.0753 3.2128 0.5502 6 17 4.0944 4.3460 1.3814 7 6 2.3133 3.4751 -0.6002 8 7 2.2419 4.6995 -1.2790 9 6 1.4679 4.8177 -2.3760 10 8 0.8335 3.8645 -2.7763 11 6 1.3916 6.1338 -3.1062 12 6 0.4519 5.9977 -4.3059 13 6 0.3751 7.3141 -5.0356 14 1 0.9398 8.1629 -4.6790 15 6 -0.4167 7.4351 -6.1578 16 7 -1.1046 6.4015 -6.5917 17 14 -0.5113 9.0665 -7.0628 18 1 0.5440 9.1157 -8.1062 19 1 -1.8453 9.2018 -7.7012 20 1 -0.3082 10.1789 -6.1003 21 7 1.6837 2.3723 -0.9315 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.8933 -0.5138 -0.8900 26 1 1.8934 -0.5139 0.8900 27 1 3.3185 1.4103 1.7374 28 1 2.7489 5.4619 -0.9588 29 1 1.0120 6.9017 -2.4321 30 1 2.3858 6.4147 -3.4538 31 1 0.8320 5.2299 -4.9798 32 1 -0.5424 5.7167 -3.9587 33 1 -1.6614 6.4866 -7.3815 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000894900119.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:23:08 Heat of formation + Delta-G solvation = 30.172416 kcal Electronic energy + Delta-G solvation = -17919.747288 eV Core-core repulsion = 14815.231657 eV Total energy + Delta-G solvation = -3104.515630 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.43573 -39.08220 -36.58728 -35.14408 -33.47643 -33.44385 -31.06993 -30.04324 -28.92759 -25.93481 -23.92595 -22.19408 -21.61382 -20.42062 -19.24267 -17.82559 -16.80163 -16.14172 -15.62756 -15.60311 -14.94569 -14.83755 -14.42261 -14.01985 -13.70558 -13.30176 -12.99226 -12.43683 -12.30597 -12.17873 -11.85289 -11.53048 -11.36225 -11.17258 -10.93161 -10.62608 -10.59813 -10.47132 -9.96256 -9.66390 -9.20910 -9.05499 -8.83312 -8.31623 -8.13671 -5.94997 -3.99540 1.66284 1.80689 2.40029 2.54934 3.34884 3.36398 3.41379 3.44111 3.44266 4.26935 4.48105 4.51795 4.75362 4.95717 5.04998 5.27507 5.35201 5.40127 5.47477 5.57195 5.80467 6.03833 6.19220 6.20247 6.72493 6.78344 6.86730 7.27398 7.75081 7.85496 7.93162 8.07291 8.38077 8.67093 9.08539 9.64039 11.15965 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.024333 B = 0.003936 C = 0.003420 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1150.425769 B = 7112.853487 C = 8185.973505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.137 3.863 3 N -0.367 5.367 4 C 0.085 3.915 5 C -0.211 4.211 6 Cl -0.045 7.045 7 C 0.318 3.682 8 N -0.648 5.648 9 C 0.502 3.498 10 O -0.483 6.483 11 C -0.125 4.125 12 C 0.036 3.964 13 C -0.527 4.527 14 H 0.057 0.943 15 C 0.058 3.942 16 N -0.889 5.889 17 Si 0.893 3.107 18 H -0.281 1.281 19 H -0.287 1.287 20 H -0.274 1.274 21 N -0.258 5.258 22 H 0.077 0.923 23 H 0.075 0.925 24 H 0.060 0.940 25 H 0.088 0.912 26 H 0.097 0.903 27 H 0.183 0.817 28 H 0.418 0.582 29 H 0.085 0.915 30 H 0.085 0.915 31 H 0.025 0.975 32 H 0.025 0.975 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.612 -10.685 18.813 23.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.017 3.983 3 N -0.150 5.150 4 C -0.064 4.064 5 C -0.252 4.252 6 Cl -0.017 7.017 7 C 0.060 3.940 8 N -0.301 5.301 9 C 0.290 3.710 10 O -0.351 6.351 11 C -0.165 4.165 12 C -0.001 4.001 13 C -0.566 4.566 14 H 0.075 0.925 15 C -0.143 4.143 16 N -0.528 5.528 17 Si 0.721 3.279 18 H -0.207 1.207 19 H -0.212 1.212 20 H -0.198 1.198 21 N -0.088 5.088 22 H 0.096 0.904 23 H 0.094 0.906 24 H 0.079 0.921 25 H 0.106 0.894 26 H 0.115 0.885 27 H 0.200 0.800 28 H 0.255 0.745 29 H 0.103 0.897 30 H 0.103 0.897 31 H 0.043 0.957 32 H 0.043 0.957 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 8.195 -11.990 17.526 22.762 hybrid contribution 0.917 1.702 0.394 1.973 sum 9.112 -10.288 17.921 22.584 Atomic orbital electron populations 1.22079 0.93439 1.02884 1.04208 1.21727 0.96439 0.76363 1.03794 1.48514 1.35347 1.10507 1.20644 1.22086 0.95101 0.92766 0.96441 1.20349 1.10126 0.93038 1.01646 1.98312 1.66568 1.59492 1.77331 1.19281 0.95058 0.88474 0.91197 1.43602 1.48821 1.09074 1.28598 1.21990 0.77577 0.92646 0.78813 1.90767 1.40626 1.40107 1.63605 1.21904 1.03767 0.91103 0.99752 1.18929 0.93901 0.97223 0.90057 1.21201 1.27573 0.96698 1.11087 0.92489 1.25021 0.95513 0.96517 0.97291 1.70005 1.28960 1.29720 1.24114 0.86580 0.77326 0.84031 0.79949 1.20670 1.21240 1.19848 1.78281 1.23618 0.95039 1.11836 0.90381 0.90637 0.92102 0.89413 0.88521 0.80007 0.74522 0.89719 0.89717 0.95679 0.95678 0.92946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.51 10.10 37.16 0.38 -1.13 16 2 C 0.14 1.13 7.23 -4.04 -0.03 1.10 16 3 N -0.37 -4.55 3.68 -61.33 -0.23 -4.78 16 4 C 0.08 0.88 11.42 -17.18 -0.20 0.69 16 5 C -0.21 -2.68 6.67 -39.80 -0.27 -2.94 16 6 Cl -0.04 -0.48 29.18 -51.86 -1.51 -1.99 16 7 C 0.32 5.19 7.82 -154.33 -1.21 3.98 16 8 N -0.65 -10.52 5.45 -11.11 -0.06 -10.58 16 9 C 0.50 10.18 7.80 -10.99 -0.09 10.10 16 10 O -0.48 -11.91 14.70 5.54 0.08 -11.83 16 11 C -0.13 -2.56 5.64 -27.88 -0.16 -2.71 16 12 C 0.04 0.99 4.26 -27.88 -0.12 0.87 16 13 C -0.53 -14.98 9.11 -34.44 -0.31 -15.30 16 14 H 0.06 1.52 7.74 -52.49 -0.41 1.11 16 15 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 16 N -0.89 -27.56 13.29 55.43 0.74 -26.83 16 17 Si 0.89 21.74 29.54 -169.99 -5.02 16.72 16 18 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 19 H -0.29 -6.94 7.11 56.52 0.40 -6.53 16 20 H -0.27 -6.45 7.11 56.52 0.40 -6.04 16 21 N -0.26 -4.54 10.64 31.46 0.33 -4.21 16 22 H 0.08 0.97 8.14 -51.93 -0.42 0.55 16 23 H 0.07 0.48 8.14 -51.93 -0.42 0.05 16 24 H 0.06 0.56 8.14 -51.93 -0.42 0.13 16 25 H 0.09 0.70 8.14 -51.93 -0.42 0.27 16 26 H 0.10 0.42 8.07 -51.93 -0.42 0.00 16 27 H 0.18 1.07 8.06 -52.48 -0.42 0.65 16 28 H 0.42 5.33 8.69 -40.82 -0.35 4.98 16 29 H 0.08 1.55 8.14 -51.93 -0.42 1.13 16 30 H 0.08 1.55 8.14 -51.93 -0.42 1.13 16 31 H 0.02 0.74 8.10 -51.93 -0.42 0.32 16 32 H 0.02 0.74 8.10 -51.93 -0.42 0.32 16 33 H 0.26 7.59 8.31 -40.82 -0.34 7.25 16 LS Contribution 309.22 15.07 4.66 4.66 Total: -1.00 -36.36 309.22 -7.22 -43.57 By element: Atomic # 1 Polarization: 3.12 SS G_CDS: -4.12 Total: -1.00 kcal Atomic # 6 Polarization: -1.65 SS G_CDS: -2.09 Total: -3.75 kcal Atomic # 7 Polarization: -47.17 SS G_CDS: 0.79 Total: -46.39 kcal Atomic # 8 Polarization: -11.91 SS G_CDS: 0.08 Total: -11.83 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -5.02 Total: 16.72 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.51 Total: -1.99 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -36.36 -7.22 -43.57 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000894900119.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.746 kcal (2) G-P(sol) polarization free energy of solvation -36.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.390 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.574 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds