Wall clock time and date at job start Mon Mar 30 2020 01:23:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46501 * 109.47287 * 2 1 4 4 C 1.35072 * 125.97798 * 125.00119 * 3 2 1 5 5 C 1.35280 * 107.83983 * 179.97438 * 4 3 2 6 6 Cl 1.73597 * 126.06944 * 179.97438 * 5 4 3 7 7 C 1.40465 * 107.85899 * 359.97438 * 5 4 3 8 8 N 1.40181 * 125.96697 * 180.02562 * 7 5 4 9 9 C 1.34770 * 120.00196 * 179.97438 * 8 7 5 10 10 O 1.21296 * 120.00054 * 0.02562 * 9 8 7 11 11 C 1.50703 * 120.00307 * 179.97438 * 9 8 7 12 12 H 1.08995 * 109.47034 * 60.00225 * 11 9 8 13 13 C 1.53005 * 109.47012 * 299.99943 * 11 9 8 14 14 C 1.50704 * 109.47187 * 180.02562 * 11 9 8 15 15 H 1.07994 * 120.00471 * 35.09752 * 14 11 9 16 16 C 1.37881 * 119.99643 * 215.10918 * 14 11 9 17 17 N 1.31516 * 119.99696 * 184.90661 * 16 14 11 18 18 Si 1.86799 * 120.00269 * 4.89906 * 16 14 11 19 19 H 1.48496 * 109.46932 * 84.82446 * 18 16 14 20 20 H 1.48491 * 109.47212 * 204.82741 * 18 16 14 21 21 H 1.48507 * 109.46996 * 324.82915 * 18 16 14 22 22 N 1.31225 * 108.06494 * 0.26266 * 7 5 4 23 23 H 1.08999 * 109.47101 * 300.00790 * 1 2 3 24 24 H 1.09003 * 109.46457 * 59.99980 * 1 2 3 25 25 H 1.08996 * 109.47592 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.47101 * 239.99210 * 2 1 3 27 27 H 1.09009 * 109.46425 * 119.99553 * 2 1 3 28 28 H 1.08006 * 126.08045 * 359.97438 * 4 3 2 29 29 H 0.97000 * 120.00310 * 359.97438 * 8 7 5 30 30 H 1.08999 * 109.47215 * 295.07447 * 13 11 9 31 31 H 1.08996 * 109.46878 * 175.07571 * 13 11 9 32 32 H 1.08997 * 109.46791 * 55.07504 * 13 11 9 33 33 H 0.97001 * 120.00027 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.8741 1.9203 0.8954 5 6 3.0753 3.2127 0.5501 6 17 4.0935 4.3463 1.3819 7 6 2.3142 3.4746 -0.6011 8 7 2.2439 4.6986 -1.2808 9 6 1.4716 4.8162 -2.3789 10 8 0.8369 3.8631 -2.7790 11 6 1.3955 6.1322 -3.1093 12 1 2.3900 6.4136 -3.4555 13 6 0.8605 7.2099 -2.1641 14 6 0.4708 5.9978 -4.2917 15 1 -0.4010 5.3638 -4.2262 16 6 0.7381 6.6842 -5.4573 17 7 -0.1178 6.6440 -6.4551 18 14 2.3157 7.6712 -5.6193 19 1 3.4168 6.7763 -6.0572 20 1 2.1246 8.7487 -6.6231 21 1 2.6598 8.2734 -4.3061 22 7 1.6765 2.3748 -0.9261 23 1 -0.3633 0.5139 0.8899 24 1 -0.3632 0.5139 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 1.8934 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8901 28 1 3.3185 1.4103 1.7373 29 1 2.7511 5.4610 -0.9607 30 1 -0.1667 6.9728 -1.8870 31 1 0.8877 8.1779 -2.6644 32 1 1.4795 7.2467 -1.2677 33 1 0.0700 7.1271 -7.2750 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000894902502.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:23:10 Heat of formation + Delta-G solvation = 38.025368 kcal Electronic energy + Delta-G solvation = -18493.695436 eV Core-core repulsion = 15389.520336 eV Total energy + Delta-G solvation = -3104.175101 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.28481 -38.85426 -36.47129 -34.93398 -33.70060 -33.22253 -31.27595 -29.90173 -28.74980 -25.26460 -24.30028 -22.63439 -21.52170 -20.47890 -18.87713 -17.74566 -17.02897 -16.12700 -15.65913 -15.38759 -14.84062 -14.42510 -14.21209 -13.79433 -13.53863 -13.21835 -12.79309 -12.48263 -12.28289 -12.23494 -11.76365 -11.56894 -11.36672 -11.23262 -11.11388 -10.75740 -10.51619 -10.31948 -10.20931 -9.82002 -9.19097 -8.75066 -8.67659 -8.55589 -7.95735 -6.07239 -4.07224 1.78892 1.93201 2.60999 2.69814 3.25677 3.31891 3.34937 3.59822 3.77827 4.38183 4.38256 4.61473 4.83729 5.03508 5.15642 5.25560 5.39808 5.47203 5.65442 5.72224 5.99410 6.13770 6.13849 6.35747 6.49812 6.78423 6.86899 7.04568 7.16674 7.41705 7.59530 8.16018 8.51806 9.03389 9.08482 9.51528 11.05779 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021012 B = 0.005536 C = 0.004636 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1332.281148 B = 5057.018287 C = 6037.669877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.138 3.862 3 N -0.369 5.369 4 C 0.083 3.917 5 C -0.212 4.212 6 Cl -0.048 7.048 7 C 0.321 3.679 8 N -0.652 5.652 9 C 0.510 3.490 10 O -0.477 6.477 11 C 0.001 3.999 12 H 0.058 0.942 13 C -0.136 4.136 14 C -0.496 4.496 15 H 0.087 0.913 16 C 0.073 3.927 17 N -0.893 5.893 18 Si 0.870 3.130 19 H -0.275 1.275 20 H -0.286 1.286 21 H -0.263 1.263 22 N -0.259 5.259 23 H 0.059 0.941 24 H 0.077 0.923 25 H 0.074 0.926 26 H 0.087 0.913 27 H 0.095 0.905 28 H 0.181 0.819 29 H 0.414 0.586 30 H 0.054 0.946 31 H 0.057 0.943 32 H 0.027 0.973 33 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.148 -9.027 17.802 21.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.018 3.982 3 N -0.152 5.152 4 C -0.066 4.066 5 C -0.253 4.253 6 Cl -0.020 7.020 7 C 0.063 3.937 8 N -0.305 5.305 9 C 0.297 3.703 10 O -0.344 6.344 11 C -0.020 4.020 12 H 0.076 0.924 13 C -0.194 4.194 14 C -0.534 4.534 15 H 0.105 0.895 16 C -0.129 4.129 17 N -0.530 5.530 18 Si 0.697 3.303 19 H -0.200 1.200 20 H -0.212 1.212 21 H -0.188 1.188 22 N -0.089 5.089 23 H 0.079 0.921 24 H 0.096 0.904 25 H 0.092 0.908 26 H 0.105 0.895 27 H 0.113 0.887 28 H 0.198 0.802 29 H 0.251 0.749 30 H 0.073 0.927 31 H 0.076 0.924 32 H 0.046 0.954 33 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 6.798 -10.206 16.444 20.513 hybrid contribution 1.867 1.377 0.685 2.419 sum 8.665 -8.829 17.129 21.129 Atomic orbital electron populations 1.22074 0.93530 1.02751 1.04209 1.21692 0.96376 0.76530 1.03650 1.48513 1.35312 1.10387 1.21028 1.22046 0.95382 0.92761 0.96394 1.20368 1.10285 0.93002 1.01640 1.98303 1.66744 1.59608 1.77317 1.19387 0.94579 0.88732 0.91048 1.43891 1.49137 1.08737 1.28720 1.22268 0.77116 0.92858 0.78025 1.90679 1.40422 1.39975 1.63284 1.19361 0.99226 0.87855 0.95606 0.92437 1.21986 1.00714 0.99658 0.97048 1.20720 1.09889 1.28450 0.94384 0.89489 1.25016 0.96382 0.95963 0.95514 1.69881 1.35432 1.42549 1.05126 0.86977 0.84574 0.80417 0.78348 1.20031 1.21161 1.18773 1.78307 1.23396 0.95062 1.12132 0.92149 0.90359 0.90753 0.89511 0.88660 0.80167 0.74867 0.92707 0.92351 0.95372 0.92478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.64 10.09 37.16 0.38 -1.27 16 2 C 0.14 1.27 7.23 -4.04 -0.03 1.24 16 3 N -0.37 -5.02 3.68 -61.34 -0.23 -5.24 16 4 C 0.08 0.96 11.42 -17.18 -0.20 0.77 16 5 C -0.21 -2.99 6.67 -39.80 -0.27 -3.26 16 6 Cl -0.05 -0.57 29.18 -51.86 -1.51 -2.08 16 7 C 0.32 5.80 7.82 -154.34 -1.21 4.59 16 8 N -0.65 -12.18 5.31 -11.11 -0.06 -12.24 16 9 C 0.51 11.78 7.12 -10.99 -0.08 11.70 16 10 O -0.48 -12.94 14.49 5.54 0.08 -12.86 16 11 C 0.00 0.04 2.30 -92.92 -0.21 -0.18 16 12 H 0.06 1.30 5.29 -51.93 -0.27 1.03 16 13 C -0.14 -2.72 9.12 37.16 0.34 -2.38 16 14 C -0.50 -14.30 8.36 -34.44 -0.29 -14.59 16 15 H 0.09 2.85 7.61 -52.49 -0.40 2.45 16 16 C 0.07 2.12 5.47 -17.82 -0.10 2.02 16 17 N -0.89 -27.50 13.96 55.43 0.77 -26.72 16 18 Si 0.87 20.89 26.99 -169.99 -4.59 16.30 16 19 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 20 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 21 H -0.26 -5.78 6.82 56.52 0.39 -5.39 16 22 N -0.26 -4.94 10.64 31.46 0.33 -4.61 16 23 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.08 1.05 8.14 -51.93 -0.42 0.62 16 25 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 26 H 0.09 0.77 8.14 -51.93 -0.42 0.35 16 27 H 0.10 0.50 8.07 -51.92 -0.42 0.08 16 28 H 0.18 1.25 8.06 -52.48 -0.42 0.83 16 29 H 0.41 6.44 8.05 -40.82 -0.33 6.11 16 30 H 0.05 1.12 8.14 -51.93 -0.42 0.70 16 31 H 0.06 1.16 8.14 -51.93 -0.42 0.73 16 32 H 0.03 0.45 7.43 -51.93 -0.39 0.06 16 33 H 0.27 7.61 8.31 -40.82 -0.34 7.27 16 LS Contribution 302.53 15.07 4.56 4.56 Total: -1.00 -35.51 302.53 -6.22 -41.73 By element: Atomic # 1 Polarization: 6.44 SS G_CDS: -3.92 Total: 2.52 kcal Atomic # 6 Polarization: 0.31 SS G_CDS: -1.66 Total: -1.35 kcal Atomic # 7 Polarization: -49.64 SS G_CDS: 0.82 Total: -48.81 kcal Atomic # 8 Polarization: -12.94 SS G_CDS: 0.08 Total: -12.86 kcal Atomic # 14 Polarization: 20.89 SS G_CDS: -4.59 Total: 16.30 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.51 Total: -2.08 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -35.51 -6.22 -41.73 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000894902502.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.755 kcal (2) G-P(sol) polarization free energy of solvation -35.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.243 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.729 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds