Wall clock time and date at job start Mon Mar 30 2020 01:23:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 N 1.46506 * 109.47289 * 2 1 4 4 C 1.35074 * 125.97435 * 124.71597 * 3 2 1 5 5 C 1.35291 * 107.83701 * 179.83989 * 4 3 2 6 6 Cl 1.73602 * 126.07098 * 180.12130 * 5 4 3 7 7 C 1.40469 * 107.85909 * 0.42754 * 5 4 3 8 8 N 1.40179 * 125.96833 * 179.73849 * 7 5 4 9 9 C 1.34772 * 119.99766 * 180.02562 * 8 7 5 10 10 O 1.21288 * 120.00499 * 0.02562 * 9 8 7 11 11 C 1.50702 * 119.99766 * 179.97438 * 9 8 7 12 12 H 1.09003 * 109.47343 * 300.00661 * 11 9 8 13 13 C 1.53000 * 109.47006 * 60.00718 * 11 9 8 14 14 C 1.50704 * 109.47192 * 180.02562 * 11 9 8 15 15 H 1.07995 * 119.99848 * 0.02562 * 14 11 9 16 16 C 1.37877 * 119.99607 * 180.02562 * 14 11 9 17 17 N 1.31507 * 120.00305 * 0.02562 * 16 14 11 18 18 Si 1.86810 * 119.99552 * 179.97438 * 16 14 11 19 19 H 1.48495 * 109.47001 * 0.02562 * 18 16 14 20 20 H 1.48502 * 109.46981 * 120.00020 * 18 16 14 21 21 H 1.48496 * 109.47208 * 240.00079 * 18 16 14 22 22 N 1.31230 * 108.06199 * 359.73205 * 7 5 4 23 23 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.46832 * 299.99854 * 1 2 3 25 25 H 1.08996 * 109.46952 * 59.99873 * 1 2 3 26 26 H 1.09001 * 109.47289 * 239.99872 * 2 1 3 27 27 H 1.09004 * 109.47261 * 120.00128 * 2 1 3 28 28 H 1.08002 * 126.08367 * 0.02562 * 4 3 2 29 29 H 0.96996 * 119.99655 * 0.02562 * 8 7 5 30 30 H 1.08998 * 109.47518 * 59.99981 * 13 11 9 31 31 H 1.09003 * 109.47196 * 180.02562 * 13 11 9 32 32 H 1.09010 * 109.46954 * 299.99573 * 13 11 9 33 33 H 0.97005 * 119.99991 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 2.8698 1.9218 0.8985 5 6 3.0751 3.2129 0.5503 6 17 4.0931 4.3465 1.3823 7 6 2.3126 3.4753 -0.5999 8 7 2.2410 4.6997 -1.2786 9 6 1.4667 4.8180 -2.3753 10 8 0.8315 3.8651 -2.7749 11 6 1.3893 6.1345 -3.1046 12 1 1.0094 6.9018 -2.4300 13 6 2.7843 6.5299 -3.5928 14 6 0.4625 6.0009 -4.2855 15 1 -0.0222 5.0572 -4.4874 16 6 0.2336 7.0835 -5.1080 17 7 0.8243 8.2325 -4.8624 18 14 -0.9146 6.9176 -6.5722 19 1 -1.4476 5.5328 -6.6289 20 1 -2.0405 7.8754 -6.4294 21 1 -0.1690 7.2131 -7.8220 22 7 1.6792 2.3738 -0.9282 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8899 26 1 1.8933 -0.5139 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 3.3109 1.4129 1.7429 29 1 2.7487 5.4618 -0.9588 30 1 3.1642 5.7626 -4.2674 31 1 2.7284 7.4823 -4.1199 32 1 3.4544 6.6267 -2.7384 33 1 0.6635 8.9940 -5.4414 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000894902518.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:23:12 Heat of formation + Delta-G solvation = 35.649984 kcal Electronic energy + Delta-G solvation = -18445.316227 eV Core-core repulsion = 15341.038122 eV Total energy + Delta-G solvation = -3104.278105 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.23804 -38.75696 -36.41611 -34.89730 -33.75501 -33.20557 -30.62715 -29.75444 -28.66780 -25.14516 -24.20271 -22.62687 -21.48556 -20.55388 -18.86633 -17.72022 -16.31638 -15.93792 -15.68215 -15.32046 -14.79352 -14.43309 -14.27128 -13.71847 -13.52282 -13.04546 -12.80601 -12.49309 -12.23805 -11.74620 -11.60771 -11.40147 -11.19894 -11.00842 -10.76791 -10.67608 -10.46903 -10.26614 -10.16424 -9.96814 -8.97658 -8.67176 -8.62901 -8.34469 -7.90217 -6.03295 -4.06537 1.82239 1.97719 2.66370 2.75050 3.33632 3.41000 3.49215 3.69021 3.87357 4.40422 4.47945 4.64580 4.84505 5.03893 5.23695 5.30412 5.41992 5.49408 5.66670 5.81955 6.07051 6.22356 6.61178 6.81764 6.88978 6.90537 7.10516 7.42374 7.54030 7.77489 8.00352 8.14977 8.39798 9.02545 9.12144 9.59008 11.04430 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021653 B = 0.005170 C = 0.004257 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1292.819846 B = 5414.377781 C = 6576.030520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.139 3.861 3 N -0.371 5.371 4 C 0.082 3.918 5 C -0.211 4.211 6 Cl -0.047 7.047 7 C 0.322 3.678 8 N -0.649 5.649 9 C 0.511 3.489 10 O -0.494 6.494 11 C 0.034 3.966 12 H 0.057 0.943 13 C -0.135 4.135 14 C -0.501 4.501 15 H 0.076 0.924 16 C 0.059 3.941 17 N -0.895 5.895 18 Si 0.900 3.100 19 H -0.271 1.271 20 H -0.284 1.284 21 H -0.284 1.284 22 N -0.261 5.261 23 H 0.073 0.927 24 H 0.059 0.941 25 H 0.077 0.923 26 H 0.086 0.914 27 H 0.095 0.905 28 H 0.181 0.819 29 H 0.416 0.584 30 H 0.033 0.967 31 H 0.096 0.904 32 H 0.014 0.986 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.858 -12.111 13.941 19.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.018 3.982 3 N -0.154 5.154 4 C -0.067 4.067 5 C -0.252 4.252 6 Cl -0.019 7.019 7 C 0.064 3.936 8 N -0.302 5.302 9 C 0.301 3.699 10 O -0.362 6.362 11 C 0.013 3.987 12 H 0.075 0.925 13 C -0.193 4.193 14 C -0.539 4.539 15 H 0.094 0.906 16 C -0.142 4.142 17 N -0.535 5.535 18 Si 0.728 3.272 19 H -0.196 1.196 20 H -0.210 1.210 21 H -0.210 1.210 22 N -0.091 5.091 23 H 0.092 0.908 24 H 0.079 0.921 25 H 0.096 0.904 26 H 0.104 0.896 27 H 0.113 0.887 28 H 0.198 0.802 29 H 0.254 0.746 30 H 0.052 0.948 31 H 0.115 0.885 32 H 0.033 0.967 33 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 4.577 -13.172 12.718 18.873 hybrid contribution 0.463 0.865 0.191 1.000 sum 5.040 -12.307 12.909 18.534 Atomic orbital electron populations 1.22072 0.93609 1.02684 1.04185 1.21672 0.96305 0.76618 1.03605 1.48500 1.35653 1.10373 1.20859 1.22041 0.95448 0.92809 0.96363 1.20386 1.10195 0.93036 1.01628 1.98306 1.66700 1.59573 1.77288 1.19411 0.94439 0.88741 0.91037 1.43851 1.48917 1.08658 1.28753 1.22446 0.76382 0.93213 0.77897 1.90627 1.41198 1.40556 1.63836 1.18914 0.96466 0.87506 0.95797 0.92523 1.21781 0.94425 1.04174 0.98914 1.21162 1.25507 0.98104 1.09166 0.90633 1.24937 0.96183 0.95063 0.97978 1.69875 1.43352 1.01386 1.38872 0.86382 0.80454 0.78311 0.82030 1.19551 1.21029 1.21020 1.78292 1.23700 0.95042 1.12089 0.90805 0.92140 0.90423 0.89579 0.88686 0.80199 0.74643 0.94799 0.88546 0.96740 0.92952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.64 10.10 37.16 0.38 -1.27 16 2 C 0.14 1.29 7.23 -4.04 -0.03 1.26 16 3 N -0.37 -5.12 3.68 -61.33 -0.23 -5.35 16 4 C 0.08 0.98 11.42 -17.17 -0.20 0.79 16 5 C -0.21 -3.09 6.67 -39.79 -0.27 -3.36 16 6 Cl -0.05 -0.59 29.18 -51.86 -1.51 -2.10 16 7 C 0.32 5.99 7.82 -154.33 -1.21 4.79 16 8 N -0.65 -12.71 5.34 -11.11 -0.06 -12.77 16 9 C 0.51 12.20 7.12 -10.99 -0.08 12.12 16 10 O -0.49 -13.39 14.18 5.55 0.08 -13.31 16 11 C 0.03 0.87 2.64 -92.92 -0.25 0.62 16 12 H 0.06 1.45 8.14 -51.93 -0.42 1.03 16 13 C -0.13 -3.12 8.87 37.16 0.33 -2.79 16 14 C -0.50 -14.30 8.38 -34.44 -0.29 -14.58 16 15 H 0.08 2.29 6.75 -52.49 -0.35 1.93 16 16 C 0.06 1.65 5.30 -17.82 -0.09 1.55 16 17 N -0.90 -25.11 11.32 55.43 0.63 -24.48 16 18 Si 0.90 21.92 29.54 -169.99 -5.02 16.90 16 19 H -0.27 -6.68 7.11 56.52 0.40 -6.28 16 20 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 21 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 22 N -0.26 -5.05 10.64 31.46 0.33 -4.72 16 23 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 24 H 0.06 0.61 8.14 -51.93 -0.42 0.18 16 25 H 0.08 1.03 8.14 -51.93 -0.42 0.61 16 26 H 0.09 0.77 8.14 -51.93 -0.42 0.34 16 27 H 0.09 0.51 8.07 -51.93 -0.42 0.09 16 28 H 0.18 1.31 8.06 -52.49 -0.42 0.89 16 29 H 0.42 7.03 8.11 -40.82 -0.33 6.70 16 30 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 31 H 0.10 2.43 6.07 -51.93 -0.32 2.12 16 32 H 0.01 0.27 7.56 -51.92 -0.39 -0.12 16 33 H 0.26 6.96 8.31 -40.82 -0.34 6.62 16 LS Contribution 302.50 15.07 4.56 4.56 Total: -1.00 -33.57 302.50 -6.83 -40.40 By element: Atomic # 1 Polarization: 5.65 SS G_CDS: -3.91 Total: 1.74 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -1.70 Total: -0.88 kcal Atomic # 7 Polarization: -47.99 SS G_CDS: 0.68 Total: -47.32 kcal Atomic # 8 Polarization: -13.39 SS G_CDS: 0.08 Total: -13.31 kcal Atomic # 14 Polarization: 21.92 SS G_CDS: -5.02 Total: 16.90 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.51 Total: -2.10 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -33.57 -6.83 -40.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000894902518.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.049 kcal (2) G-P(sol) polarization free energy of solvation -33.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.825 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.399 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds