Wall clock time and date at job start Mon Mar 30 2020 01:30:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.46502 * 120.00196 * 2 1 4 4 C 1.50695 * 109.47375 * 270.00252 * 3 2 1 5 5 H 1.08002 * 119.99705 * 359.97438 * 4 3 2 6 6 C 1.37872 * 120.00294 * 180.02562 * 4 3 2 7 7 N 1.31519 * 119.99715 * 359.97438 * 6 4 3 8 8 Si 1.86802 * 120.00133 * 179.97438 * 6 4 3 9 9 H 1.48493 * 109.47057 * 59.99870 * 8 6 4 10 10 H 1.48506 * 109.46920 * 179.97438 * 8 6 4 11 11 H 1.48500 * 109.46997 * 299.99593 * 8 6 4 12 12 C 1.34773 * 119.99906 * 180.02562 * 2 1 3 13 13 O 1.21599 * 120.00196 * 180.02562 * 12 2 1 14 14 N 1.34783 * 120.00219 * 0.02562 * 12 2 1 15 15 C 1.40088 * 120.00163 * 184.64549 * 14 12 2 16 16 C 1.38761 * 120.44844 * 145.03273 * 15 14 12 17 17 N 1.31879 * 120.74867 * 180.02562 * 16 15 14 18 18 C 1.31997 * 121.78414 * 0.02562 * 17 16 15 19 19 F 1.35098 * 119.59185 * 179.97438 * 18 17 16 20 20 C 1.38763 * 120.82006 * 359.97438 * 18 17 16 21 21 F 1.35096 * 120.41702 * 180.02562 * 20 18 17 22 22 C 1.38643 * 119.16539 * 0.02562 * 20 18 17 23 23 H 1.09001 * 109.47396 * 270.00049 * 1 2 3 24 24 H 1.09002 * 109.46952 * 29.99809 * 1 2 3 25 25 H 1.09003 * 109.47163 * 149.99693 * 1 2 3 26 26 H 1.09002 * 109.46594 * 30.00160 * 3 2 1 27 27 H 1.08996 * 109.46956 * 149.99777 * 3 2 1 28 28 H 0.97010 * 119.99438 * 180.02562 * 7 6 4 29 29 H 0.96995 * 119.99450 * 4.63600 * 14 12 2 30 30 H 1.08000 * 119.62374 * 359.73890 * 16 15 14 31 31 H 1.07997 * 120.81321 * 180.02562 * 22 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4487 1.7038 -1.4207 5 1 2.0981 1.0958 -2.2416 6 6 3.1269 2.8774 -1.6727 7 7 3.5543 3.6175 -0.6730 8 14 3.4388 3.4164 -3.4339 9 1 2.1416 3.5943 -4.1342 10 1 4.1813 4.7025 -3.4338 11 1 4.2412 2.3811 -4.1335 12 6 2.1388 -1.1672 -0.0005 13 8 3.3548 -1.1672 -0.0001 14 7 1.4649 -2.3344 -0.0016 15 6 2.1619 -3.5457 0.0961 16 6 1.6158 -4.6173 0.7882 17 7 2.2669 -5.7601 0.8843 18 6 3.4538 -5.9326 0.3329 19 9 4.0817 -7.1221 0.4595 20 6 4.0646 -4.9073 -0.3751 21 9 5.2792 -5.0929 -0.9365 22 6 3.4125 -3.6901 -0.4991 23 1 -0.3634 0.0000 1.0277 24 1 -0.3633 0.8900 -0.5138 25 1 -0.3634 -0.8900 -0.5139 26 1 1.6084 2.0283 0.5139 27 1 3.1499 1.1383 0.5139 28 1 4.0312 4.4435 -0.8503 29 1 0.4974 -2.3357 -0.0698 30 1 0.6486 -4.5128 1.2572 31 1 3.8632 -2.8742 -1.0446 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000934400489.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:25 Heat of formation + Delta-G solvation = -61.911445 kcal Electronic energy + Delta-G solvation = -20198.390833 eV Core-core repulsion = 16538.085467 eV Total energy + Delta-G solvation = -3660.305366 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.087 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -49.54868 -48.64548 -40.83800 -39.23955 -35.45598 -34.79548 -32.74281 -31.99906 -29.77748 -27.81384 -26.03083 -24.46461 -23.82452 -22.48924 -20.02595 -18.62822 -18.25721 -17.95034 -17.06157 -16.65429 -16.63516 -16.10451 -15.15483 -15.11672 -15.08173 -14.73798 -14.23048 -14.01235 -13.56280 -13.29141 -13.16814 -12.88781 -12.71264 -12.28054 -12.06558 -11.31945 -11.02852 -10.86380 -10.66951 -10.32395 -10.22683 -9.80332 -9.71245 -9.36342 -8.52401 -8.42300 -7.84276 -6.13644 -4.19345 0.53449 0.81911 2.70905 3.15195 3.21690 3.26143 3.31516 3.34076 3.61810 3.92830 4.09615 4.34916 4.42275 4.56927 4.79305 5.17364 5.20914 5.32423 5.51088 5.69188 5.87803 5.98287 6.14876 6.49348 6.58866 7.15162 7.26783 7.30401 7.43887 7.82121 8.10285 8.29571 8.78182 8.94925 9.46297 10.94272 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.026637 B = 0.004512 C = 0.004049 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1050.914742 B = 6203.939270 C = 6913.663786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.606 5.606 3 C 0.259 3.741 4 C -0.532 4.532 5 H 0.057 0.943 6 C 0.063 3.937 7 N -0.893 5.893 8 Si 0.899 3.101 9 H -0.277 1.277 10 H -0.285 1.285 11 H -0.276 1.276 12 C 0.696 3.304 13 O -0.565 6.565 14 N -0.687 5.687 15 C 0.156 3.844 16 C 0.092 3.908 17 N -0.466 5.466 18 C 0.248 3.752 19 F -0.107 7.107 20 C 0.056 3.944 21 F -0.117 7.117 22 C -0.091 4.091 23 H 0.049 0.951 24 H 0.082 0.918 25 H 0.051 0.949 26 H 0.037 0.963 27 H 0.047 0.953 28 H 0.265 0.735 29 H 0.410 0.590 30 H 0.176 0.824 31 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.416 -13.836 1.926 15.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.340 5.340 3 C 0.140 3.860 4 C -0.571 4.571 5 H 0.075 0.925 6 C -0.139 4.139 7 N -0.532 5.532 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.202 1.202 12 C 0.397 3.603 13 O -0.441 6.441 14 N -0.338 5.338 15 C 0.055 3.945 16 C -0.069 4.069 17 N -0.179 5.179 18 C 0.092 3.908 19 F -0.086 7.086 20 C 0.033 3.967 21 F -0.095 7.095 22 C -0.120 4.120 23 H 0.068 0.932 24 H 0.100 0.900 25 H 0.070 0.930 26 H 0.055 0.945 27 H 0.065 0.935 28 H 0.075 0.925 29 H 0.248 0.752 30 H 0.193 0.807 31 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -6.747 -14.216 2.421 15.921 hybrid contribution 0.348 0.830 -1.521 1.768 sum -6.399 -13.386 0.900 14.864 Atomic orbital electron populations 1.21656 0.81278 1.02637 1.00747 1.47544 1.05990 1.06148 1.74320 1.19324 0.92446 0.76562 0.97708 1.21373 1.37068 1.06498 0.92167 0.92470 1.24921 0.95184 0.96305 0.97517 1.69918 1.38025 1.14362 1.30859 0.86543 0.78390 0.77911 0.84485 1.20236 1.21099 1.20155 1.15951 0.85581 0.80031 0.78696 1.90915 1.11275 1.85298 1.56652 1.42954 1.10393 1.02961 1.77499 1.18370 0.93144 0.87160 0.95778 1.22347 1.00856 0.86650 0.97084 1.67021 1.06311 1.25192 1.19339 1.18010 0.90490 0.82309 1.00010 1.91634 1.79800 1.42963 1.94194 1.18251 0.83989 0.94439 1.00065 1.91566 1.39879 1.95392 1.82685 1.21960 0.95127 0.96273 0.98664 0.93241 0.89957 0.93040 0.94485 0.93524 0.92513 0.75184 0.80692 0.80355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.06 10.24 59.85 0.61 1.68 16 2 N -0.61 -11.52 2.86 -188.74 -0.54 -12.06 16 3 C 0.26 6.31 5.16 -5.20 -0.03 6.28 16 4 C -0.53 -14.28 9.38 -34.44 -0.32 -14.61 16 5 H 0.06 1.53 7.81 -52.49 -0.41 1.12 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 7 N -0.89 -25.59 13.29 55.43 0.74 -24.85 16 8 Si 0.90 21.10 29.54 -169.99 -5.02 16.08 16 9 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 10 H -0.29 -6.63 7.11 56.52 0.40 -6.22 16 11 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 12 C 0.70 13.08 8.14 -86.92 -0.71 12.37 16 13 O -0.57 -13.06 13.40 5.28 0.07 -12.99 16 14 N -0.69 -9.08 5.23 -14.12 -0.07 -9.15 16 15 C 0.16 2.04 6.32 -83.51 -0.53 1.51 16 16 C 0.09 1.00 11.12 -17.34 -0.19 0.80 16 17 N -0.47 -6.05 10.36 -13.40 -0.14 -6.19 16 18 C 0.25 3.44 8.41 -17.29 -0.15 3.30 16 19 F -0.11 -1.49 17.21 2.25 0.04 -1.45 16 20 C 0.06 0.81 7.35 -39.24 -0.29 0.52 16 21 F -0.12 -1.74 17.19 2.25 0.04 -1.70 16 22 C -0.09 -1.37 8.79 -39.05 -0.34 -1.72 16 23 H 0.05 0.54 8.14 -51.93 -0.42 0.12 16 24 H 0.08 1.14 8.07 -51.93 -0.42 0.72 16 25 H 0.05 0.50 6.30 -51.93 -0.33 0.17 16 26 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 27 H 0.05 1.30 7.42 -51.93 -0.39 0.91 16 28 H 0.27 7.21 8.31 -40.82 -0.34 6.88 16 29 H 0.41 3.82 6.52 -40.82 -0.27 3.55 16 30 H 0.18 1.23 8.06 -52.49 -0.42 0.80 16 31 H 0.18 3.09 6.31 -52.49 -0.33 2.76 16 LS Contribution 285.79 15.07 4.31 4.31 Total: -1.00 -31.79 285.79 -5.16 -36.95 By element: Atomic # 1 Polarization: 1.80 SS G_CDS: -2.54 Total: -0.73 kcal Atomic # 6 Polarization: 13.82 SS G_CDS: -2.04 Total: 11.78 kcal Atomic # 7 Polarization: -52.23 SS G_CDS: -0.02 Total: -52.25 kcal Atomic # 8 Polarization: -13.06 SS G_CDS: 0.07 Total: -12.99 kcal Atomic # 9 Polarization: -3.23 SS G_CDS: 0.08 Total: -3.15 kcal Atomic # 14 Polarization: 21.10 SS G_CDS: -5.02 Total: 16.08 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -31.79 -5.16 -36.95 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000934400489.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.958 kcal (2) G-P(sol) polarization free energy of solvation -31.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.953 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.911 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds