Wall clock time and date at job start Mon Mar 30 2020 01:30:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35617 * 117.00432 * 2 1 4 4 N 1.32675 * 120.53750 * 359.97438 * 3 2 1 5 5 C 1.31955 * 120.78259 * 180.02562 * 4 3 2 6 6 Cl 1.73597 * 119.03463 * 180.02562 * 5 4 3 7 7 N 1.31838 * 121.92971 * 359.97438 * 5 4 3 8 8 C 1.32512 * 121.00291 * 359.73093 * 7 5 4 9 9 C 1.38776 * 119.10739 * 0.52207 * 8 7 5 10 10 N 1.40085 * 120.87823 * 179.76558 * 9 8 7 11 11 C 1.46504 * 119.99447 * 359.71718 * 10 9 8 12 12 C 1.53006 * 109.46883 * 179.97438 * 11 10 9 13 13 C 1.52997 * 109.47127 * 180.02562 * 12 11 10 14 14 C 1.50696 * 109.47242 * 180.02562 * 13 12 11 15 15 H 1.08004 * 119.99967 * 0.02562 * 14 13 12 16 16 C 1.37875 * 120.00542 * 180.02562 * 14 13 12 17 17 N 1.31516 * 119.99408 * 359.97438 * 16 14 13 18 18 Si 1.86800 * 120.00405 * 180.02562 * 16 14 13 19 19 H 1.48495 * 109.46931 * 89.99755 * 18 16 14 20 20 H 1.48500 * 109.46738 * 209.99997 * 18 16 14 21 21 H 1.48501 * 109.46755 * 329.99741 * 18 16 14 22 22 H 1.09011 * 109.46614 * 299.99424 * 1 2 3 23 23 H 1.08996 * 109.47319 * 59.99439 * 1 2 3 24 24 H 1.08994 * 109.47757 * 180.02562 * 1 2 3 25 25 H 1.08007 * 120.44582 * 180.28719 * 8 7 5 26 26 H 0.96992 * 120.00586 * 179.71977 * 10 9 8 27 27 H 1.09001 * 109.46891 * 60.00274 * 11 10 9 28 28 H 1.08993 * 109.47378 * 299.99646 * 11 10 9 29 29 H 1.09001 * 109.46801 * 300.00349 * 12 11 10 30 30 H 1.09001 * 109.46998 * 59.99945 * 12 11 10 31 31 H 1.08996 * 109.46952 * 300.00302 * 13 12 11 32 32 H 1.09001 * 109.46832 * 60.00321 * 13 12 11 33 33 H 0.96999 * 119.99910 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2083 0.0000 4 7 1.3327 2.3278 -0.0005 5 6 1.9268 3.5060 -0.0010 6 17 0.9509 4.9417 -0.0010 7 7 3.2398 3.6248 -0.0005 8 6 4.0220 2.5552 0.0058 9 6 3.4417 1.2946 0.0010 10 7 4.2332 0.1388 0.0025 11 6 5.6939 0.2514 0.0030 12 6 6.3133 -1.1477 0.0053 13 6 7.8387 -1.0301 0.0064 14 6 8.4488 -2.4081 0.0081 15 1 7.8121 -3.2805 0.0079 16 6 9.8196 -2.5552 0.0099 17 7 10.5949 -1.4929 0.0096 18 14 10.5758 -4.2633 0.0112 19 1 10.7779 -4.7162 -1.3885 20 1 11.8840 -4.2249 0.7129 21 1 9.6665 -5.2066 0.7104 22 1 -0.3633 0.5138 0.8901 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3634 -1.0276 0.0005 25 1 5.0966 2.6630 0.0108 26 1 3.8143 -0.7360 0.0032 27 1 6.0163 0.7925 0.8926 28 1 6.0171 0.7906 -0.8874 29 1 5.9900 -1.6866 0.8959 30 1 5.9909 -1.6892 -0.8840 31 1 8.1622 -0.4910 -0.8839 32 1 8.1607 -0.4888 0.8961 33 1 11.5593 -1.5963 0.0105 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001168430988.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:48 Heat of formation + Delta-G solvation = -5.567897 kcal Electronic energy + Delta-G solvation = -17671.679183 eV Core-core repulsion = 14565.613737 eV Total energy + Delta-G solvation = -3106.065447 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.36858 -38.60438 -37.15233 -36.53088 -33.88675 -33.29872 -31.89605 -29.50956 -27.74765 -26.58564 -24.30628 -23.73974 -22.34898 -20.61825 -18.99750 -18.37209 -16.81733 -16.53893 -16.42989 -15.89025 -15.02195 -14.97969 -14.64420 -14.59838 -14.42930 -13.65724 -12.70559 -12.40313 -12.30833 -12.03252 -12.02060 -11.57616 -11.53224 -11.45033 -11.00697 -10.84255 -10.62720 -10.58346 -10.19214 -9.84369 -9.62417 -9.53150 -9.21409 -8.43889 -7.52013 -6.08844 -4.11937 0.84803 0.92940 1.41325 2.66533 3.26467 3.26937 3.33720 3.36745 3.54825 3.94261 4.39041 4.49907 4.65348 4.86529 5.03932 5.06644 5.27477 5.37568 5.42478 5.54087 5.84387 5.93106 6.39727 6.43844 6.58713 6.72269 6.85913 7.12587 7.53715 7.56267 7.65213 7.78779 7.89145 8.30387 8.94386 9.52914 11.02411 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.034207 B = 0.003146 C = 0.002890 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 818.338978 B = 8897.406867 C = 9684.693737 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 O -0.301 6.301 3 C 0.305 3.695 4 N -0.525 5.525 5 C 0.321 3.679 6 Cl 0.010 6.990 7 N -0.477 5.477 8 C 0.092 3.908 9 C 0.127 3.873 10 N -0.715 5.715 11 C 0.113 3.887 12 C -0.120 4.120 13 C 0.025 3.975 14 C -0.524 4.524 15 H 0.055 0.945 16 C 0.058 3.942 17 N -0.894 5.894 18 Si 0.893 3.107 19 H -0.280 1.280 20 H -0.286 1.286 21 H -0.274 1.274 22 H 0.061 0.939 23 H 0.061 0.939 24 H 0.099 0.901 25 H 0.184 0.816 26 H 0.409 0.591 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.019 0.981 32 H 0.019 0.981 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.241 7.245 -0.006 20.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.206 6.206 3 C 0.111 3.889 4 N -0.257 5.257 5 C 0.026 3.974 6 Cl 0.038 6.962 7 N -0.196 5.196 8 C -0.076 4.076 9 C 0.015 3.985 10 N -0.343 5.343 11 C -0.010 4.010 12 C -0.158 4.158 13 C -0.013 4.013 14 C -0.562 4.562 15 H 0.074 0.926 16 C -0.144 4.144 17 N -0.533 5.533 18 Si 0.721 3.279 19 H -0.206 1.206 20 H -0.212 1.212 21 H -0.199 1.199 22 H 0.079 0.921 23 H 0.079 0.921 24 H 0.118 0.882 25 H 0.201 0.799 26 H 0.246 0.754 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -19.367 7.935 -0.004 20.930 hybrid contribution 0.439 -1.730 -0.012 1.785 sum -18.928 6.206 -0.016 19.919 Atomic orbital electron populations 1.22918 0.76490 1.03298 1.02697 1.86192 1.23427 1.23012 1.87971 1.19350 0.87532 0.84779 0.97220 1.67179 1.41410 0.97600 1.19542 1.21970 0.86432 0.86564 1.02418 1.98397 1.68377 1.32759 1.96710 1.67676 1.04040 1.33876 1.13982 1.22621 1.00563 0.84046 1.00413 1.18918 0.88267 0.91218 1.00131 1.44997 1.05972 1.04789 1.78525 1.21845 0.76778 1.01058 1.01278 1.21863 1.00096 0.92592 1.01250 1.19029 0.87069 0.97552 0.97632 1.21187 0.91492 0.92449 1.51113 0.92637 1.25017 0.97407 0.96793 0.95162 1.69952 1.04271 1.28577 1.50463 0.86578 0.78677 0.84518 0.78147 1.20623 1.21161 1.19871 0.92063 0.92055 0.88230 0.79912 0.75439 0.91766 0.91760 0.92518 0.92520 0.96236 0.96219 0.92865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.35 10.41 101.05 1.05 1.40 16 2 O -0.30 -3.56 9.86 -18.55 -0.18 -3.74 16 3 C 0.31 4.07 7.55 -16.54 -0.12 3.94 16 4 N -0.53 -7.15 9.35 -11.56 -0.11 -7.26 16 5 C 0.32 4.45 8.17 -91.98 -0.75 3.69 16 6 Cl 0.01 0.12 29.26 -51.86 -1.52 -1.40 16 7 N -0.48 -6.75 10.39 -11.56 -0.12 -6.87 16 8 C 0.09 1.20 10.58 -17.06 -0.18 1.02 16 9 C 0.13 1.69 6.72 -83.24 -0.56 1.14 16 10 N -0.71 -9.36 5.75 -58.27 -0.33 -9.70 16 11 C 0.11 1.64 4.96 -4.04 -0.02 1.62 16 12 C -0.12 -2.16 5.27 -26.73 -0.14 -2.30 16 13 C 0.02 0.59 4.97 -27.89 -0.14 0.45 16 14 C -0.52 -14.13 9.11 -34.44 -0.31 -14.45 16 15 H 0.06 1.45 7.74 -52.48 -0.41 1.05 16 16 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 17 N -0.89 -25.96 13.29 55.43 0.74 -25.22 16 18 Si 0.89 21.01 29.54 -169.99 -5.02 15.99 16 19 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 20 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 21 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 22 H 0.06 0.52 8.12 -51.92 -0.42 0.10 16 23 H 0.06 0.52 8.12 -51.93 -0.42 0.10 16 24 H 0.10 0.59 8.14 -51.93 -0.42 0.17 16 25 H 0.18 2.08 6.90 -52.48 -0.36 1.72 16 26 H 0.41 5.12 7.96 -40.82 -0.32 4.80 16 27 H 0.06 0.91 7.99 -51.93 -0.42 0.50 16 28 H 0.06 0.91 8.01 -51.93 -0.42 0.50 16 29 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 30 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 31 H 0.02 0.49 8.14 -51.93 -0.42 0.06 16 32 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 33 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 LS Contribution 305.84 15.07 4.61 4.61 Total: -1.00 -29.56 305.84 -7.23 -36.79 By element: Atomic # 1 Polarization: 2.80 SS G_CDS: -4.02 Total: -1.22 kcal Atomic # 6 Polarization: -0.70 SS G_CDS: -1.27 Total: -1.97 kcal Atomic # 7 Polarization: -49.22 SS G_CDS: 0.17 Total: -49.05 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -0.18 Total: -3.74 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -5.02 Total: 15.99 kcal Atomic # 17 Polarization: 0.12 SS G_CDS: -1.52 Total: -1.40 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -29.56 -7.23 -36.79 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001168430988.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.225 kcal (2) G-P(sol) polarization free energy of solvation -29.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.793 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds