Wall clock time and date at job start Mon Mar 30 2020 01:21:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42903 * 113.99399 * 2 1 4 4 H 1.09003 * 109.47355 * 329.99432 * 3 2 1 5 5 C 1.52994 * 109.47464 * 90.00111 * 3 2 1 6 6 C 1.53000 * 109.46645 * 209.99924 * 3 2 1 7 7 N 1.46508 * 109.47181 * 65.00189 * 6 3 2 8 8 C 1.38538 * 119.99763 * 179.97438 * 7 6 3 9 9 C 1.40034 * 120.45227 * 359.97438 * 8 7 6 10 10 C 1.38800 * 118.59740 * 179.97438 * 9 8 7 11 11 Cl 1.73596 * 120.34510 * 179.97438 * 10 9 8 12 12 N 1.32209 * 119.31959 * 359.97438 * 10 9 8 13 13 C 1.33420 * 120.86452 * 0.02562 * 12 10 9 14 14 C 1.41575 * 119.23989 * 179.97438 * 13 12 10 15 15 H 1.08002 * 119.99760 * 179.97438 * 14 13 12 16 16 C 1.40047 * 119.99799 * 0.27929 * 14 13 12 17 17 N 1.30694 * 120.00429 * 359.71982 * 16 14 13 18 18 Si 1.86801 * 119.99850 * 179.72049 * 16 14 13 19 19 H 1.48496 * 109.47377 * 60.00093 * 18 16 14 20 20 H 1.48504 * 109.46970 * 179.97438 * 18 16 14 21 21 H 1.48499 * 109.47383 * 299.99707 * 18 16 14 22 22 N 1.32569 * 120.44494 * 180.24756 * 8 7 6 23 23 H 1.09003 * 109.46743 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.47040 * 299.99784 * 1 2 3 25 25 H 1.09000 * 109.47408 * 60.00315 * 1 2 3 26 26 H 1.09002 * 109.47515 * 179.97438 * 5 3 2 27 27 H 1.09009 * 109.46997 * 299.99900 * 5 3 2 28 28 H 1.09002 * 109.46923 * 59.99595 * 5 3 2 29 29 H 1.08996 * 109.47665 * 305.00057 * 6 3 2 30 30 H 1.08998 * 109.47085 * 184.99669 * 6 3 2 31 31 H 0.97002 * 119.99920 * 359.97438 * 7 6 3 32 32 H 1.08005 * 120.70516 * 359.97438 * 9 8 7 33 33 H 0.96995 * 120.00257 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3449 1.9994 -0.5139 5 6 2.2176 1.7715 1.4424 6 6 3.3588 1.2634 -0.7213 7 7 3.1476 0.9331 -2.1329 8 6 4.2306 0.8380 -2.9916 9 6 5.5311 1.0562 -2.5205 10 6 6.5879 0.9506 -3.4141 11 17 8.2185 1.2125 -2.8790 12 7 6.3400 0.6484 -4.6771 13 6 5.0910 0.4454 -5.0998 14 6 4.8648 0.1241 -6.4600 15 1 3.8587 -0.0431 -6.8153 16 6 5.9463 0.0168 -7.3433 17 7 7.1639 0.2187 -6.9132 18 14 5.6486 -0.4148 -9.1362 19 1 4.7801 0.6178 -9.7563 20 1 6.9470 -0.4656 -9.8552 21 1 4.9823 -1.7391 -9.2225 22 7 4.0493 0.5446 -4.2716 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 2.6613 2.7672 1.4424 27 1 1.2567 1.8015 1.9563 28 1 2.8829 1.0776 1.9562 29 1 3.9931 0.5053 -0.2618 30 1 3.8425 2.2371 -0.6444 31 1 2.2494 0.7811 -2.4663 32 1 5.7082 1.3015 -1.4837 33 1 7.9129 0.1440 -7.5249 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001169772498.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:21:44 Heat of formation + Delta-G solvation = -8.237268 kcal Electronic energy + Delta-G solvation = -18168.263975 eV Core-core repulsion = 15062.082776 eV Total energy + Delta-G solvation = -3106.181199 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.14267 -38.41789 -35.68489 -35.35148 -33.51695 -32.12449 -30.92656 -29.29286 -26.88083 -26.38617 -25.45973 -22.26226 -21.60126 -21.03287 -17.94236 -16.94572 -16.68811 -16.07448 -15.30963 -15.05413 -14.77707 -14.11400 -13.92661 -13.70407 -13.36959 -13.05584 -12.84236 -12.64825 -12.56166 -12.15331 -11.50453 -11.38354 -11.34947 -11.11877 -10.80413 -10.78078 -10.39193 -10.17678 -9.91918 -9.75263 -9.08561 -8.99174 -8.22229 -7.45075 -7.10502 -6.53687 -4.77019 2.56676 3.00587 3.01450 3.07275 3.10132 3.17619 3.64794 3.82179 3.93817 4.65201 4.73415 4.96728 5.04485 5.17918 5.27548 5.47302 5.56058 5.59499 5.74345 5.87945 5.92910 6.00383 6.13624 6.39516 6.46117 6.85930 6.96669 7.09259 7.16938 7.75548 8.14211 8.24961 8.56999 8.62915 9.09314 10.12546 10.27288 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.019733 B = 0.005021 C = 0.004066 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1418.568172 B = 5575.504741 C = 6884.875458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.378 6.378 3 C 0.074 3.926 4 H 0.066 0.934 5 C -0.171 4.171 6 C 0.140 3.860 7 N -0.726 5.726 8 C 0.457 3.543 9 C -0.406 4.406 10 C 0.269 3.731 11 Cl -0.083 7.083 12 N -0.528 5.528 13 C 0.435 3.565 14 C -0.395 4.395 15 H 0.095 0.905 16 C 0.066 3.934 17 N -0.703 5.703 18 Si 0.920 3.080 19 H -0.263 1.263 20 H -0.276 1.276 21 H -0.263 1.263 22 N -0.642 5.642 23 H 0.084 0.916 24 H 0.038 0.962 25 H 0.042 0.958 26 H 0.069 0.931 27 H 0.058 0.942 28 H 0.067 0.933 29 H 0.066 0.934 30 H 0.071 0.929 31 H 0.397 0.603 32 H 0.110 0.890 33 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.395 2.409 10.416 12.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.297 6.297 3 C 0.016 3.984 4 H 0.084 0.916 5 C -0.229 4.229 6 C 0.015 3.985 7 N -0.362 5.362 8 C 0.209 3.791 9 C -0.439 4.439 10 C 0.088 3.912 11 Cl -0.055 7.055 12 N -0.249 5.249 13 C 0.199 3.801 14 C -0.431 4.431 15 H 0.113 0.887 16 C -0.162 4.162 17 N -0.324 5.324 18 Si 0.743 3.257 19 H -0.188 1.188 20 H -0.201 1.201 21 H -0.187 1.187 22 N -0.372 5.372 23 H 0.103 0.897 24 H 0.056 0.944 25 H 0.061 0.939 26 H 0.088 0.912 27 H 0.077 0.923 28 H 0.086 0.914 29 H 0.084 0.916 30 H 0.089 0.911 31 H 0.232 0.768 32 H 0.129 0.871 33 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -6.953 2.080 9.523 11.973 hybrid contribution -0.223 0.243 0.223 0.398 sum -7.176 2.323 9.746 12.324 Atomic orbital electron populations 1.22786 0.81357 1.02735 0.99737 1.88013 1.19379 1.27306 1.95015 1.22388 0.94998 0.85144 0.95852 0.91611 1.22200 1.02529 1.02021 0.96144 1.21307 0.95127 1.00846 0.81260 1.43925 1.06894 1.78828 1.06591 1.18123 0.85475 0.87370 0.88091 1.20911 0.91608 1.30844 1.00520 1.21432 0.84350 0.93500 0.91893 1.98291 1.23697 1.94670 1.88868 1.68590 1.23274 1.21275 1.11802 1.19462 0.80235 0.87443 0.92921 1.19307 0.95005 1.38921 0.89830 0.88695 1.26120 0.94604 0.94044 1.01448 1.70140 0.99168 1.27066 1.35979 0.86185 0.78664 0.80151 0.80668 1.18756 1.20098 1.18738 1.68228 1.36121 1.31006 1.01871 0.89699 0.94356 0.93928 0.91201 0.92252 0.91357 0.91563 0.91123 0.76787 0.87147 0.91141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 10.82 101.05 1.09 1.38 16 2 O -0.38 -4.87 10.29 -35.23 -0.36 -5.24 16 3 C 0.07 0.85 2.75 -26.73 -0.07 0.77 16 4 H 0.07 0.69 7.79 -51.93 -0.40 0.29 16 5 C -0.17 -1.53 9.53 37.15 0.35 -1.18 16 6 C 0.14 2.01 4.59 -4.04 -0.02 1.99 16 7 N -0.73 -13.35 5.66 -60.25 -0.34 -13.69 16 8 C 0.46 10.70 7.71 -154.99 -1.19 9.50 16 9 C -0.41 -9.42 9.23 -38.70 -0.36 -9.77 16 10 C 0.27 6.83 7.33 -17.18 -0.13 6.70 16 11 Cl -0.08 -1.80 29.15 -51.86 -1.51 -3.31 16 12 N -0.53 -14.98 7.86 -9.84 -0.08 -15.05 16 13 C 0.44 12.43 7.37 -158.34 -1.17 11.27 16 14 C -0.40 -10.81 9.37 -37.63 -0.35 -11.16 16 15 H 0.10 2.47 7.85 -52.49 -0.41 2.06 16 16 C 0.07 1.67 5.50 -17.36 -0.10 1.57 16 17 N -0.70 -18.67 11.42 55.55 0.63 -18.04 16 18 Si 0.92 18.50 29.56 -169.99 -5.02 13.47 16 19 H -0.26 -5.20 7.11 56.52 0.40 -4.80 16 20 H -0.28 -5.38 7.11 56.52 0.40 -4.98 16 21 H -0.26 -5.22 7.11 56.52 0.40 -4.81 16 22 N -0.64 -17.11 10.39 -11.89 -0.12 -17.24 16 23 H 0.08 0.72 8.14 -51.93 -0.42 0.30 16 24 H 0.04 0.30 7.87 -51.93 -0.41 -0.11 16 25 H 0.04 0.38 8.08 -51.93 -0.42 -0.04 16 26 H 0.07 0.54 8.14 -51.93 -0.42 0.12 16 27 H 0.06 0.47 7.87 -51.92 -0.41 0.06 16 28 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 29 H 0.07 1.01 7.97 -51.93 -0.41 0.59 16 30 H 0.07 0.95 7.97 -51.93 -0.41 0.54 16 31 H 0.40 7.00 8.60 -40.82 -0.35 6.65 16 32 H 0.11 2.25 6.85 -52.48 -0.36 1.89 16 33 H 0.28 6.66 8.29 -40.82 -0.34 6.32 16 LS Contribution 303.40 15.07 4.57 4.57 Total: -1.00 -30.99 303.40 -8.16 -39.16 By element: Atomic # 1 Polarization: 8.27 SS G_CDS: -3.99 Total: 4.28 kcal Atomic # 6 Polarization: 13.01 SS G_CDS: -1.94 Total: 11.08 kcal Atomic # 7 Polarization: -64.11 SS G_CDS: 0.09 Total: -64.02 kcal Atomic # 8 Polarization: -4.87 SS G_CDS: -0.36 Total: -5.24 kcal Atomic # 14 Polarization: 18.50 SS G_CDS: -5.02 Total: 13.47 kcal Atomic # 17 Polarization: -1.80 SS G_CDS: -1.51 Total: -3.31 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -30.99 -8.16 -39.16 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001169772498.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.922 kcal (2) G-P(sol) polarization free energy of solvation -30.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.165 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.237 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds