Wall clock time and date at job start Mon Mar 30 2020 01:10:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52997 * 109.46820 * 2 1 4 4 H 1.08998 * 109.47391 * 305.25404 * 3 2 1 5 5 C 1.50699 * 109.46912 * 185.25264 * 3 2 1 6 6 H 1.08004 * 120.00094 * 245.46488 * 5 3 2 7 7 C 1.37875 * 119.99953 * 65.47068 * 5 3 2 8 8 N 1.31510 * 120.00134 * 6.78726 * 7 5 3 9 9 Si 1.86800 * 119.99952 * 186.79059 * 7 5 3 10 10 H 1.48503 * 109.47117 * 94.98419 * 9 7 5 11 11 H 1.48498 * 109.47110 * 214.98605 * 9 7 5 12 12 H 1.48502 * 109.46947 * 334.99070 * 9 7 5 13 13 N 1.46504 * 109.47069 * 65.25547 * 3 2 1 14 14 C 1.34781 * 119.99832 * 274.99470 * 13 3 2 15 15 O 1.21634 * 119.99773 * 5.00706 * 14 13 3 16 16 C 1.47159 * 119.99957 * 185.00108 * 14 13 3 17 17 C 1.38404 * 126.87884 * 355.68854 * 16 14 13 18 18 C 1.39773 * 105.35222 * 179.91409 * 17 16 14 19 19 Cl 1.73599 * 126.08587 * 180.08900 * 18 17 16 20 20 N 1.30927 * 107.83212 * 0.35345 * 18 17 16 21 21 N 1.28440 * 110.92029 * 359.77163 * 20 18 17 22 22 C 1.46497 * 125.17559 * 180.02562 * 21 20 18 23 23 H 1.08998 * 109.47222 * 60.00348 * 1 2 3 24 24 H 1.08996 * 109.47284 * 299.99796 * 1 2 3 25 25 H 1.09009 * 109.47108 * 179.97438 * 1 2 3 26 26 H 1.08998 * 109.46780 * 119.99955 * 2 1 3 27 27 H 1.08997 * 109.46833 * 239.99920 * 2 1 3 28 28 H 0.96997 * 120.00108 * 180.02562 * 8 7 5 29 29 H 0.96997 * 120.00394 * 94.99901 * 13 3 2 30 30 H 1.08004 * 127.32440 * 0.02562 * 17 16 14 31 31 H 1.09001 * 109.46822 * 272.00140 * 22 21 20 32 32 H 1.09001 * 109.47396 * 31.99766 * 22 21 20 33 33 H 1.09000 * 109.47272 * 152.00617 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6018 1.9828 -0.8392 5 6 3.5413 1.4445 -0.1301 6 1 4.1533 1.8075 0.6825 7 6 4.1337 0.9831 -1.2864 8 7 3.3911 0.6669 -2.3247 9 14 5.9911 0.8070 -1.3782 10 1 6.3730 -0.5891 -1.0462 11 1 6.4519 1.1329 -2.7518 12 1 6.6250 1.7372 -0.4096 13 7 1.6576 2.0956 1.2544 14 6 0.4407 2.6624 1.3755 15 8 -0.3730 2.5531 0.4780 16 6 0.0966 3.4132 2.5934 17 6 0.8752 3.5564 3.7287 18 6 0.1214 4.3515 4.5965 19 17 0.5970 4.8664 6.1848 20 7 -1.0097 4.6342 4.0008 21 7 -1.0576 4.1036 2.8321 22 6 -2.1793 4.2213 1.8971 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8933 -0.5138 0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 3.8078 0.3419 -3.1381 29 1 2.2802 2.1202 1.9979 30 1 1.8573 3.1433 3.9056 31 1 -2.8983 3.4252 2.0903 32 1 -2.6637 5.1886 2.0307 33 1 -1.8105 4.1376 0.8748 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001192918492.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:10:58 Heat of formation + Delta-G solvation = 29.607431 kcal Electronic energy + Delta-G solvation = -18708.408094 eV Core-core repulsion = 15603.867964 eV Total energy + Delta-G solvation = -3104.540130 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.56862 -38.96548 -36.76611 -35.23874 -33.30484 -32.46348 -31.57532 -30.29382 -27.18384 -26.87117 -23.68414 -22.72442 -21.55455 -20.08299 -19.51957 -18.13927 -16.40855 -16.37040 -15.72263 -15.46327 -14.91465 -14.53871 -14.14434 -13.85336 -13.39490 -13.23169 -12.76490 -12.42870 -12.20255 -11.79753 -11.71864 -11.57599 -11.40826 -11.07567 -10.86207 -10.64530 -10.44153 -10.27663 -9.77100 -9.37711 -9.18524 -9.13422 -8.92274 -8.57789 -8.01879 -6.21639 -4.28606 1.36496 1.56652 2.32567 2.69738 3.21276 3.29136 3.30711 3.63022 3.86569 4.30866 4.56089 5.00589 5.12333 5.15127 5.22225 5.33974 5.54504 5.66604 6.13414 6.28717 6.33970 6.52406 6.56670 6.93238 7.06161 7.17076 7.27025 7.48022 7.61649 7.72302 7.84501 7.97320 8.45521 8.64492 8.88223 9.37795 10.86283 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.022175 B = 0.004999 C = 0.004314 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1262.390488 B = 5599.701648 C = 6489.672796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.121 4.121 3 C 0.271 3.729 4 H 0.058 0.942 5 C -0.539 4.539 6 H 0.063 0.937 7 C 0.070 3.930 8 N -0.880 5.880 9 Si 0.900 3.100 10 H -0.279 1.279 11 H -0.285 1.285 12 H -0.273 1.273 13 N -0.684 5.684 14 C 0.573 3.427 15 O -0.542 6.542 16 C -0.006 4.006 17 C -0.180 4.180 18 C 0.070 3.930 19 Cl -0.001 7.001 20 N -0.273 5.273 21 N -0.249 5.249 22 C 0.086 3.914 23 H 0.051 0.949 24 H 0.042 0.958 25 H 0.023 0.977 26 H 0.036 0.964 27 H 0.084 0.916 28 H 0.265 0.735 29 H 0.393 0.607 30 H 0.170 0.830 31 H 0.086 0.914 32 H 0.091 0.909 33 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.211 5.003 10.697 13.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.160 4.160 3 C 0.170 3.830 4 H 0.076 0.924 5 C -0.577 4.577 6 H 0.081 0.919 7 C -0.134 4.134 8 N -0.517 5.517 9 Si 0.727 3.273 10 H -0.205 1.205 11 H -0.211 1.211 12 H -0.197 1.197 13 N -0.332 5.332 14 C 0.356 3.644 15 O -0.422 6.422 16 C -0.135 4.135 17 C -0.210 4.210 18 C -0.112 4.112 19 Cl 0.027 6.973 20 N -0.110 5.110 21 N -0.037 5.037 22 C -0.053 4.053 23 H 0.071 0.929 24 H 0.061 0.939 25 H 0.042 0.958 26 H 0.054 0.946 27 H 0.102 0.898 28 H 0.075 0.925 29 H 0.226 0.774 30 H 0.187 0.813 31 H 0.105 0.895 32 H 0.110 0.890 33 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -7.832 5.474 9.985 13.821 hybrid contribution 2.025 -0.464 0.411 2.117 sum -5.807 5.010 10.396 12.919 Atomic orbital electron populations 1.21882 0.97944 0.98185 1.01577 1.21873 0.93045 0.99574 1.01547 1.18927 0.94721 0.89146 0.80210 0.92439 1.21174 0.90303 1.44315 1.01893 0.91855 1.24870 0.98612 0.94901 0.95016 1.69960 1.35490 1.43158 1.03061 0.86463 0.84787 0.78525 0.77545 1.20489 1.21100 1.19735 1.46325 1.13421 1.54498 1.18926 1.16819 0.83826 0.79691 0.84031 1.90766 1.48815 1.61490 1.41103 1.21947 0.89285 1.03632 0.98672 1.22030 1.02238 1.04481 0.92219 1.22024 0.93846 1.04113 0.91188 1.98361 1.89912 1.90118 1.18956 1.72986 1.21806 1.20616 0.95552 1.45469 1.13976 1.33905 1.10371 1.22455 0.86216 1.04031 0.92626 0.92950 0.93891 0.95820 0.94556 0.89785 0.92478 0.77381 0.81258 0.89517 0.89004 0.86298 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.88 8.46 37.16 0.31 -2.57 16 2 C -0.12 -2.75 5.50 -26.73 -0.15 -2.90 16 3 C 0.27 6.37 2.10 -69.08 -0.15 6.23 16 4 H 0.06 1.57 7.62 -51.93 -0.40 1.17 16 5 C -0.54 -13.48 8.67 -34.44 -0.30 -13.78 16 6 H 0.06 1.52 7.73 -52.48 -0.41 1.11 16 7 C 0.07 1.81 5.20 -17.82 -0.09 1.71 16 8 N -0.88 -23.84 12.03 55.43 0.67 -23.18 16 9 Si 0.90 19.91 29.54 -169.99 -5.02 14.89 16 10 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 11 H -0.29 -6.36 7.11 56.52 0.40 -5.96 16 12 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 13 N -0.68 -13.26 5.01 -56.09 -0.28 -13.54 16 14 C 0.57 10.70 6.55 -12.64 -0.08 10.61 16 15 O -0.54 -11.16 11.45 5.25 0.06 -11.10 16 16 C -0.01 -0.10 6.96 -82.06 -0.57 -0.67 16 17 C -0.18 -2.58 10.50 -38.95 -0.41 -2.99 16 18 C 0.07 1.01 7.85 -17.36 -0.14 0.88 16 19 Cl 0.00 -0.01 29.32 -51.86 -1.52 -1.53 16 20 N -0.27 -4.17 11.90 32.91 0.39 -3.78 16 21 N -0.25 -3.74 3.75 -63.88 -0.24 -3.98 16 22 C 0.09 1.01 10.84 59.85 0.65 1.66 16 23 H 0.05 1.15 7.81 -51.93 -0.41 0.75 16 24 H 0.04 0.87 5.52 -51.93 -0.29 0.59 16 25 H 0.02 0.44 8.14 -51.92 -0.42 0.01 16 26 H 0.04 0.78 8.14 -51.93 -0.42 0.36 16 27 H 0.08 2.11 6.69 -51.93 -0.35 1.76 16 28 H 0.27 6.85 8.31 -40.82 -0.34 6.51 16 29 H 0.39 6.64 7.55 -40.82 -0.31 6.33 16 30 H 0.17 2.01 7.58 -52.48 -0.40 1.61 16 31 H 0.09 0.90 8.14 -51.93 -0.42 0.48 16 32 H 0.09 0.85 8.14 -51.93 -0.42 0.43 16 33 H 0.12 1.54 6.28 -51.93 -0.33 1.21 16 LS Contribution 294.62 15.07 4.44 4.44 Total: -1.00 -28.36 294.62 -6.12 -34.49 By element: Atomic # 1 Polarization: 8.81 SS G_CDS: -3.70 Total: 5.11 kcal Atomic # 6 Polarization: -0.90 SS G_CDS: -0.92 Total: -1.81 kcal Atomic # 7 Polarization: -45.01 SS G_CDS: 0.54 Total: -44.47 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: 0.06 Total: -11.10 kcal Atomic # 14 Polarization: 19.91 SS G_CDS: -5.02 Total: 14.89 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -1.52 Total: -1.53 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -28.36 -6.12 -34.49 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001192918492.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.095 kcal (2) G-P(sol) polarization free energy of solvation -28.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.487 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.607 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds