Wall clock time and date at job start Mon Mar 30 2020 01:28:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 N 1.28446 * 125.17781 * 2 1 4 4 C 1.30913 * 110.92125 * 180.02562 * 3 2 1 5 5 Cl 1.73608 * 126.07999 * 179.97438 * 4 3 2 6 6 C 1.39773 * 107.83933 * 0.02562 * 4 3 2 7 7 C 1.36591 * 125.17779 * 180.02562 * 2 1 3 8 8 C 1.47163 * 126.87475 * 0.02562 * 7 2 1 9 9 O 1.21629 * 120.00313 * 355.00375 * 8 7 2 10 10 N 1.34785 * 119.99964 * 174.99283 * 8 7 2 11 11 C 1.46501 * 119.99799 * 185.07736 * 10 8 7 12 12 C 1.53000 * 109.46808 * 180.02562 * 11 10 8 13 13 C 1.53004 * 109.46843 * 180.02562 * 12 11 10 14 14 C 1.50705 * 109.46989 * 180.02562 * 13 12 11 15 15 H 1.08001 * 119.99760 * 359.97438 * 14 13 12 16 16 C 1.37871 * 119.99866 * 180.02562 * 14 13 12 17 17 N 1.31510 * 120.00257 * 359.97438 * 16 14 13 18 18 Si 1.86799 * 119.99852 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.47194 * 359.97438 * 18 16 14 20 20 H 1.48501 * 109.47284 * 119.99873 * 18 16 14 21 21 H 1.48504 * 109.47342 * 239.99954 * 18 16 14 22 22 H 1.09001 * 109.47507 * 95.56717 * 1 2 3 23 23 H 1.09002 * 109.47413 * 215.56254 * 1 2 3 24 24 H 1.08998 * 109.47747 * 335.56204 * 1 2 3 25 25 H 1.08003 * 127.32756 * 179.97438 * 6 4 3 26 26 H 0.96996 * 119.99885 * 5.08577 * 10 8 7 27 27 H 1.09003 * 109.47487 * 300.00665 * 11 10 8 28 28 H 1.08998 * 109.47335 * 60.00436 * 11 10 8 29 29 H 1.08999 * 109.47405 * 299.99853 * 12 11 10 30 30 H 1.08995 * 109.47463 * 60.00332 * 12 11 10 31 31 H 1.08995 * 109.46961 * 299.99508 * 13 12 11 32 32 H 1.08998 * 109.47478 * 59.99771 * 13 12 11 33 33 H 0.97006 * 120.00466 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 7 2.2049 1.0499 0.0000 4 6 3.4737 0.7275 -0.0005 5 17 4.8102 1.8356 -0.0014 6 6 3.5611 -0.6675 -0.0015 7 6 2.2518 -1.1165 -0.0005 8 6 1.7984 -2.5165 -0.0017 9 8 0.6127 -2.7718 0.0895 10 7 2.6970 -3.5158 -0.1039 11 6 2.2399 -4.9031 -0.2171 12 6 3.4511 -5.8324 -0.3179 13 6 2.9738 -7.2812 -0.4368 14 6 4.1668 -8.1967 -0.5354 15 1 5.1656 -7.7862 -0.5157 16 6 3.9832 -9.5582 -0.6518 17 7 2.7671 -10.0580 -0.6763 18 14 5.4620 -10.6929 -0.7748 19 1 6.7090 -9.8881 -0.7247 20 1 5.4456 -11.6521 0.3587 21 1 5.4071 -11.4405 -2.0568 22 1 -0.3634 -0.0997 -1.0228 23 1 -0.3634 -0.8360 0.5977 24 1 -0.3634 0.9355 0.4251 25 1 4.4591 -1.2675 -0.0026 26 1 3.6462 -3.3165 -0.1024 27 1 1.6533 -5.1655 0.6633 28 1 1.6236 -5.0109 -1.1096 29 1 4.0380 -5.5703 -1.1982 30 1 4.0671 -5.7246 0.5748 31 1 2.3867 -7.5437 0.4433 32 1 2.3580 -7.3888 -1.3297 33 1 2.6379 -11.0160 -0.7579 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001192922036.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:28:10 Heat of formation + Delta-G solvation = 21.177139 kcal Electronic energy + Delta-G solvation = -17577.424890 eV Core-core repulsion = 14472.519195 eV Total energy + Delta-G solvation = -3104.905695 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.92897 -39.42295 -37.01266 -35.66161 -33.75079 -33.20753 -31.87277 -30.72815 -27.38836 -26.84750 -24.05169 -22.73949 -21.60465 -20.85562 -20.01379 -18.19273 -16.76211 -16.48524 -16.35918 -15.73463 -15.31757 -14.89091 -14.48289 -14.24523 -13.94827 -13.81376 -13.50772 -12.75908 -12.34999 -12.04563 -12.02536 -11.91439 -11.84283 -10.96046 -10.92674 -10.82561 -10.62349 -10.26394 -9.95073 -9.57528 -9.50749 -9.23647 -9.16457 -8.97327 -8.41647 -6.06084 -4.09294 0.92563 1.28581 2.00213 2.31283 3.01951 3.19028 3.27704 3.35627 3.39021 4.21205 4.39924 4.42950 4.82074 4.90319 4.99536 5.14656 5.29076 5.30147 5.57218 5.65642 5.78096 6.04110 6.20979 6.24755 6.49607 6.68968 6.90851 7.35742 7.54583 7.58222 7.69464 7.92131 8.02735 8.33075 8.97533 9.55445 11.05197 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.028416 B = 0.003091 C = 0.002798 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 985.138828 B = 9056.684575 C =10006.168407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.245 5.245 3 N -0.264 5.264 4 C 0.070 3.930 5 Cl 0.006 6.994 6 C -0.172 4.172 7 C -0.018 4.018 8 C 0.585 3.415 9 O -0.539 6.539 10 N -0.705 5.705 11 C 0.117 3.883 12 C -0.122 4.122 13 C 0.024 3.976 14 C -0.523 4.523 15 H 0.057 0.943 16 C 0.057 3.943 17 N -0.894 5.894 18 Si 0.893 3.107 19 H -0.273 1.273 20 H -0.284 1.284 21 H -0.284 1.284 22 H 0.090 0.910 23 H 0.114 0.886 24 H 0.097 0.903 25 H 0.172 0.828 26 H 0.403 0.597 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.056 0.944 30 H 0.057 0.943 31 H 0.020 0.980 32 H 0.019 0.981 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.245 21.761 1.428 21.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 N -0.034 5.034 3 N -0.101 5.101 4 C -0.111 4.111 5 Cl 0.034 6.966 6 C -0.202 4.202 7 C -0.147 4.147 8 C 0.369 3.631 9 O -0.417 6.417 10 N -0.355 5.355 11 C -0.005 4.005 12 C -0.160 4.160 13 C -0.014 4.014 14 C -0.561 4.561 15 H 0.075 0.925 16 C -0.145 4.145 17 N -0.533 5.533 18 Si 0.721 3.279 19 H -0.197 1.197 20 H -0.210 1.210 21 H -0.210 1.210 22 H 0.108 0.892 23 H 0.133 0.867 24 H 0.116 0.884 25 H 0.190 0.810 26 H 0.238 0.762 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -1.968 22.382 1.459 22.515 hybrid contribution 1.877 -1.084 -0.111 2.171 sum -0.091 21.297 1.349 21.340 Atomic orbital electron populations 1.22472 0.71336 1.06114 1.05479 1.45514 1.08051 1.01146 1.48703 1.73059 1.02637 1.13859 1.20534 1.22075 0.88590 0.90134 1.10333 1.98384 1.38950 1.61982 1.97309 1.22060 0.96601 0.92961 1.08574 1.21559 0.90552 0.90375 1.12179 1.16818 0.86055 0.82679 0.77498 1.90802 1.16131 1.84313 1.50488 1.45945 1.09630 1.07273 1.72672 1.21787 0.98938 0.77467 1.02283 1.21920 0.95297 0.97662 1.01142 1.19034 0.96888 0.87805 0.97648 1.21231 0.92871 0.91540 1.50461 0.92521 1.25026 0.95769 0.98413 0.95249 1.69969 1.20362 1.12603 1.50331 0.86525 0.82939 0.80808 0.77657 1.19711 1.20987 1.20995 0.89199 0.86725 0.88418 0.81019 0.76213 0.91158 0.91283 0.92483 0.92463 0.96206 0.96223 0.92946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.74 10.71 59.84 0.64 1.38 16 2 N -0.25 -2.89 3.75 -63.89 -0.24 -3.13 16 3 N -0.26 -3.27 11.90 32.91 0.39 -2.88 16 4 C 0.07 0.81 7.85 -17.37 -0.14 0.67 16 5 Cl 0.01 0.06 29.33 -51.86 -1.52 -1.46 16 6 C -0.17 -1.84 10.50 -38.95 -0.41 -2.25 16 7 C -0.02 -0.22 6.96 -82.06 -0.57 -0.79 16 8 C 0.59 8.08 7.79 -12.63 -0.10 7.98 16 9 O -0.54 -8.79 14.80 5.25 0.08 -8.71 16 10 N -0.70 -9.20 5.54 -61.46 -0.34 -9.54 16 11 C 0.12 1.87 5.68 -4.04 -0.02 1.85 16 12 C -0.12 -2.22 5.27 -26.73 -0.14 -2.36 16 13 C 0.02 0.58 4.97 -27.88 -0.14 0.44 16 14 C -0.52 -14.17 9.11 -34.44 -0.31 -14.49 16 15 H 0.06 1.48 7.74 -52.49 -0.41 1.08 16 16 C 0.06 1.59 5.46 -17.82 -0.10 1.49 16 17 N -0.89 -26.26 13.29 55.43 0.74 -25.53 16 18 Si 0.89 21.07 29.54 -169.99 -5.02 16.05 16 19 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 20 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 21 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 22 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 23 H 0.11 1.07 6.54 -51.93 -0.34 0.73 16 24 H 0.10 0.63 8.14 -51.93 -0.42 0.20 16 25 H 0.17 1.34 7.58 -52.48 -0.40 0.94 16 26 H 0.40 4.20 7.50 -40.82 -0.31 3.89 16 27 H 0.07 1.19 8.14 -51.93 -0.42 0.76 16 28 H 0.07 1.15 8.14 -51.93 -0.42 0.73 16 29 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 30 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 31 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 32 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 33 H 0.26 7.22 8.31 -40.82 -0.34 6.88 16 LS Contribution 306.57 15.07 4.62 4.62 Total: -1.00 -31.66 306.57 -6.55 -38.21 By element: Atomic # 1 Polarization: 2.41 SS G_CDS: -3.97 Total: -1.56 kcal Atomic # 6 Polarization: -4.78 SS G_CDS: -1.29 Total: -6.06 kcal Atomic # 7 Polarization: -41.62 SS G_CDS: 0.55 Total: -41.07 kcal Atomic # 8 Polarization: -8.79 SS G_CDS: 0.08 Total: -8.71 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.02 Total: 16.05 kcal Atomic # 17 Polarization: 0.06 SS G_CDS: -1.52 Total: -1.46 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -31.66 -6.55 -38.21 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001192922036.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.382 kcal (2) G-P(sol) polarization free energy of solvation -31.655 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.205 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds