Wall clock time and date at job start Mon Mar 30 2020 00:50:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35764 * 116.99883 * 2 1 4 4 C 1.38827 * 119.88991 * 0.02562 * 3 2 1 5 5 C 1.38035 * 120.09604 * 179.97438 * 4 3 2 6 6 F 1.35096 * 120.06139 * 180.02562 * 5 4 3 7 7 C 1.40044 * 119.87181 * 359.97438 * 5 4 3 8 8 C 1.47347 * 120.10200 * 179.97438 * 7 5 4 9 9 O 1.21632 * 120.00346 * 303.89085 * 8 7 5 10 10 N 1.34777 * 119.99938 * 123.89845 * 8 7 5 11 11 C 1.46502 * 120.00014 * 3.72193 * 10 8 7 12 12 C 1.36918 * 120.00304 * 183.71991 * 10 8 7 13 13 H 1.08008 * 119.99586 * 351.49787 * 12 10 8 14 14 C 1.39008 * 120.00286 * 171.50309 * 12 10 8 15 15 N 1.31382 * 119.99948 * 7.64035 * 14 12 10 16 16 Si 1.86798 * 120.00086 * 187.64733 * 14 12 10 17 17 H 1.48505 * 109.47348 * 89.99541 * 16 14 12 18 18 H 1.48500 * 109.47294 * 209.99431 * 16 14 12 19 19 H 1.48501 * 109.47038 * 329.99597 * 16 14 12 20 20 C 1.39867 * 119.78456 * 0.02562 * 7 5 4 21 21 C 1.37792 * 119.90297 * 359.72464 * 20 7 5 22 22 F 1.35100 * 119.93925 * 180.27160 * 21 20 7 23 23 H 1.08999 * 109.46785 * 180.02562 * 1 2 3 24 24 H 1.08997 * 109.47674 * 59.99002 * 1 2 3 25 25 H 1.09004 * 109.46851 * 299.99319 * 1 2 3 26 26 H 1.08000 * 119.95225 * 359.96861 * 4 3 2 27 27 H 1.08998 * 109.46657 * 356.60913 * 11 10 8 28 28 H 1.08994 * 109.47379 * 116.61417 * 11 10 8 29 29 H 1.09001 * 109.46843 * 236.61282 * 11 10 8 30 30 H 0.97006 * 119.99908 * 180.02562 * 15 14 12 31 31 H 1.08007 * 120.04644 * 180.02562 * 20 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2097 0.0000 4 6 1.2870 2.3725 0.0005 5 6 1.9092 3.6047 0.0011 6 9 1.1705 4.7358 0.0021 7 6 3.3076 3.6799 0.0016 8 6 3.9771 4.9925 0.0016 9 8 3.7305 5.8010 -0.8730 10 7 4.8628 5.2972 0.9707 11 6 5.2212 4.2947 1.9771 12 6 5.4276 6.5437 1.0147 13 1 5.2721 7.2360 0.2004 14 6 6.2013 6.9181 2.1072 15 7 6.5155 6.0313 3.0244 16 14 6.7940 8.6819 2.2715 17 1 5.7895 9.4734 3.0265 18 1 8.0888 8.7034 2.9983 19 1 6.9747 9.2712 0.9205 20 6 4.0666 2.5051 0.0011 21 6 3.4360 1.2799 0.0057 22 9 4.1684 0.1447 0.0108 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5140 -0.8898 25 1 -0.3633 0.5138 0.8901 26 1 0.2086 2.3130 0.0004 27 1 4.6311 3.3924 1.8172 28 1 6.2811 4.0559 1.8906 29 1 5.0179 4.6902 2.9723 30 1 7.0551 6.2927 3.7870 31 1 5.1453 2.5582 0.0019 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001193971357.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:50:22 Heat of formation + Delta-G solvation = -110.571420 kcal Electronic energy + Delta-G solvation = -20792.739646 eV Core-core repulsion = 17098.031473 eV Total energy + Delta-G solvation = -3694.708172 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -48.66981 -48.60454 -40.04935 -38.74789 -36.67779 -34.79826 -31.87147 -30.54055 -29.99780 -27.57346 -26.43637 -24.76338 -22.93080 -22.65484 -19.78187 -18.50791 -17.60360 -17.13141 -16.92859 -16.35898 -16.04609 -15.57111 -15.15941 -15.01241 -14.71843 -14.45003 -14.35169 -14.12096 -13.76689 -13.45768 -12.60967 -12.29210 -12.17689 -11.98842 -11.75914 -11.55593 -11.36676 -11.15675 -11.03408 -10.66156 -10.42076 -10.23605 -9.12475 -8.83849 -8.62029 -8.04309 -7.98340 -6.37558 -3.90918 1.02618 1.05917 2.95989 3.07852 3.19744 3.25032 3.31331 3.82205 4.01924 4.19544 4.30806 4.61805 4.68828 4.87469 4.95335 5.05073 5.13752 5.25128 5.36472 5.47627 5.75243 5.95082 6.16691 6.23881 6.31136 6.58738 6.97566 7.13327 7.32381 7.46827 7.93342 8.35702 9.04845 9.28028 9.83255 10.54591 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.030586 B = 0.005348 C = 0.004861 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 915.224376 B = 5234.400778 C = 5758.992709 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.305 6.305 3 C 0.121 3.879 4 C -0.226 4.226 5 C 0.164 3.836 6 F -0.119 7.119 7 C -0.125 4.125 8 C 0.466 3.534 9 O -0.583 6.583 10 N -0.426 5.426 11 C 0.098 3.902 12 C -0.298 4.298 13 H 0.109 0.891 14 C 0.029 3.971 15 N -0.877 5.877 16 Si 0.936 3.064 17 H -0.275 1.275 18 H -0.282 1.282 19 H -0.267 1.267 20 C -0.065 4.065 21 C 0.055 3.945 22 F -0.130 7.130 23 H 0.103 0.897 24 H 0.059 0.941 25 H 0.059 0.941 26 H 0.150 0.850 27 H 0.030 0.970 28 H 0.062 0.938 29 H 0.088 0.912 30 H 0.269 0.731 31 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.427 -11.026 -1.190 13.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.218 6.218 3 C 0.074 3.926 4 C -0.246 4.246 5 C 0.143 3.857 6 F -0.097 7.097 7 C -0.130 4.130 8 C 0.254 3.746 9 O -0.470 6.470 10 N -0.142 5.142 11 C -0.045 4.045 12 C -0.425 4.425 13 H 0.127 0.873 14 C -0.174 4.174 15 N -0.518 5.518 16 Si 0.762 3.238 17 H -0.201 1.201 18 H -0.207 1.207 19 H -0.192 1.192 20 C -0.085 4.085 21 C 0.035 3.965 22 F -0.109 7.109 23 H 0.121 0.879 24 H 0.078 0.922 25 H 0.078 0.922 26 H 0.168 0.832 27 H 0.048 0.952 28 H 0.081 0.919 29 H 0.107 0.893 30 H 0.080 0.920 31 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -8.304 -10.799 -1.395 13.694 hybrid contribution 0.094 0.782 0.331 0.854 sum -8.210 -10.017 -1.064 12.996 Atomic orbital electron populations 1.23154 0.77876 1.04247 1.01825 1.86101 1.21806 1.25404 1.88461 1.18657 0.90414 0.84903 0.98591 1.20851 1.01057 0.90072 1.12597 1.17274 0.87864 0.81820 0.98779 1.91552 1.76115 1.49015 1.92999 1.20100 0.91978 0.96003 1.04879 1.17273 0.84859 0.86294 0.86168 1.90655 1.67365 1.50357 1.38589 1.43677 1.34391 1.12577 1.23540 1.22157 0.99485 0.88747 0.94088 1.19895 1.27052 0.90195 1.05398 0.87336 1.25425 0.96640 1.00210 0.95135 1.70146 1.36530 1.33117 1.11957 0.85768 0.77878 0.81322 0.78860 1.20114 1.20749 1.19186 1.21083 1.01497 0.88554 0.97357 1.16696 0.85728 0.82820 1.11218 1.91497 1.76562 1.48316 1.94504 0.87898 0.92232 0.92210 0.83237 0.95188 0.91931 0.89329 0.92013 0.82597 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.19 9.81 101.05 0.99 1.18 16 2 O -0.30 -3.90 10.34 -19.00 -0.20 -4.10 16 3 C 0.12 1.77 6.70 -38.99 -0.26 1.51 16 4 C -0.23 -3.25 8.99 -39.44 -0.35 -3.60 16 5 C 0.16 3.00 7.27 -38.98 -0.28 2.72 16 6 F -0.12 -2.37 16.70 2.25 0.04 -2.33 16 7 C -0.12 -2.53 4.81 -104.91 -0.50 -3.04 16 8 C 0.47 11.77 6.79 -12.55 -0.09 11.69 16 9 O -0.58 -16.77 16.53 5.25 0.09 -16.68 16 10 N -0.43 -11.00 3.02 -123.45 -0.37 -11.37 16 11 C 0.10 2.22 8.15 59.85 0.49 2.71 16 12 C -0.30 -8.21 9.54 -15.00 -0.14 -8.35 16 13 H 0.11 3.13 7.19 -52.48 -0.38 2.75 16 14 C 0.03 0.74 5.45 -17.46 -0.10 0.65 16 15 N -0.88 -22.38 9.49 55.50 0.53 -21.85 16 16 Si 0.94 20.32 29.56 -169.99 -5.02 15.30 16 17 H -0.28 -5.96 7.11 56.52 0.40 -5.56 16 18 H -0.28 -5.97 7.11 56.52 0.40 -5.56 16 19 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 20 C -0.07 -1.13 7.39 -39.14 -0.29 -1.42 16 21 C 0.06 0.88 7.30 -39.37 -0.29 0.60 16 22 F -0.13 -2.07 17.10 2.25 0.04 -2.03 16 23 H 0.10 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.06 0.42 7.65 -51.93 -0.40 0.02 16 25 H 0.06 0.42 7.65 -51.93 -0.40 0.03 16 26 H 0.15 1.65 6.27 -52.49 -0.33 1.32 16 27 H 0.03 0.58 4.59 -51.93 -0.24 0.35 16 28 H 0.06 1.44 7.56 -51.93 -0.39 1.05 16 29 H 0.09 2.14 6.48 -51.93 -0.34 1.80 16 30 H 0.27 6.48 8.31 -40.82 -0.34 6.14 16 31 H 0.16 2.60 7.51 -52.48 -0.39 2.21 16 LS Contribution 277.62 15.07 4.18 4.18 Total: -1.00 -31.01 277.62 -3.97 -34.97 By element: Atomic # 1 Polarization: 1.69 SS G_CDS: -2.42 Total: -0.73 kcal Atomic # 6 Polarization: 5.46 SS G_CDS: -0.83 Total: 4.64 kcal Atomic # 7 Polarization: -33.38 SS G_CDS: 0.15 Total: -33.23 kcal Atomic # 8 Polarization: -20.67 SS G_CDS: -0.11 Total: -20.78 kcal Atomic # 9 Polarization: -4.44 SS G_CDS: 0.08 Total: -4.36 kcal Atomic # 14 Polarization: 20.32 SS G_CDS: -5.02 Total: 15.30 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -31.01 -3.97 -34.97 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001193971357.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.598 kcal (2) G-P(sol) polarization free energy of solvation -31.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds