Wall clock time and date at job start Mon Mar 30 2020 01:32:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42898 * 113.99892 * 2 1 4 4 C 1.53001 * 109.46782 * 180.02562 * 3 2 1 5 5 N 1.46499 * 109.47486 * 64.99927 * 4 3 2 6 6 C 1.36937 * 119.99689 * 269.99815 * 5 4 3 7 7 H 1.08006 * 119.99824 * 142.59842 * 6 5 4 8 8 C 1.38811 * 120.00519 * 322.60110 * 6 5 4 9 9 N 1.31612 * 120.00199 * 157.86701 * 8 6 5 10 10 Si 1.86801 * 119.99840 * 337.87042 * 8 6 5 11 11 H 1.48496 * 109.47177 * 95.21962 * 10 8 6 12 12 H 1.48496 * 109.46867 * 215.22024 * 10 8 6 13 13 H 1.48503 * 109.46885 * 335.22065 * 10 8 6 14 14 C 1.46497 * 119.99958 * 89.99727 * 5 4 3 15 15 C 1.50692 * 109.47259 * 264.43610 * 14 5 4 16 16 C 1.38349 * 119.98527 * 95.52465 * 15 14 5 17 17 N 1.32150 * 120.02116 * 180.27505 * 16 15 14 18 18 C 1.32236 * 119.98225 * 359.97438 * 17 16 15 19 19 Cl 1.73605 * 120.01540 * 180.02562 * 18 17 16 20 20 C 1.38525 * 119.97061 * 0.02562 * 18 17 16 21 21 N 1.32118 * 119.97860 * 0.02562 * 20 18 17 22 22 H 1.09003 * 109.46804 * 300.00080 * 1 2 3 23 23 H 1.09000 * 109.46989 * 59.99718 * 1 2 3 24 24 H 1.09000 * 109.47448 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.47335 * 59.99894 * 3 2 1 26 26 H 1.08999 * 109.47101 * 299.99657 * 3 2 1 27 27 H 1.09000 * 109.47053 * 304.99467 * 4 3 2 28 28 H 1.09002 * 109.46803 * 185.00344 * 4 3 2 29 29 H 0.97000 * 120.00054 * 180.02562 * 9 8 6 30 30 H 1.09001 * 109.46579 * 144.43543 * 14 5 4 31 31 H 1.08996 * 109.47168 * 24.44026 * 14 5 4 32 32 H 1.08007 * 119.98484 * 0.25053 * 16 15 14 33 33 H 1.07994 * 120.00993 * 179.97438 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 7 3.9758 0.5643 -1.2527 6 6 4.0968 -0.7971 -1.3367 7 1 3.8241 -1.3082 -2.2483 8 6 4.5700 -1.5203 -0.2505 9 7 4.2926 -2.8023 -0.1422 10 14 5.6003 -0.6739 1.0578 11 1 4.7246 -0.2490 2.1793 12 1 6.6300 -1.6167 1.5635 13 1 6.2653 0.5170 0.4704 14 6 4.2865 1.4005 -2.4148 15 6 3.0790 1.4812 -3.3128 16 6 2.2071 2.5499 -3.2046 17 7 1.1451 2.6186 -3.9880 18 6 0.9162 1.6658 -4.8760 19 17 -0.4784 1.7556 -5.9061 20 6 1.7896 0.5961 -4.9838 21 7 2.8504 0.5282 -4.1992 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 1.6887 1.8464 0.8899 26 1 1.6887 1.8463 -0.8900 27 1 3.8515 0.5682 0.8410 28 1 3.9786 2.1764 0.0890 29 1 4.6229 -3.3076 0.6171 30 1 5.1197 0.9631 -2.9647 31 1 4.5578 2.4016 -2.0798 32 1 2.3943 3.3280 -2.4793 33 1 1.6030 -0.1826 -5.7085 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001194899433.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:32:07 Heat of formation + Delta-G solvation = 32.820292 kcal Electronic energy + Delta-G solvation = -19228.310643 eV Core-core repulsion = 16123.909833 eV Total energy + Delta-G solvation = -3104.400810 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -40.87377 -37.49854 -36.74718 -35.70297 -34.01580 -32.14966 -31.15868 -29.12347 -26.62306 -25.75188 -24.52379 -23.47063 -22.36391 -20.68102 -17.68680 -17.19620 -16.73563 -16.12432 -15.77270 -15.29261 -14.98458 -14.74782 -14.24620 -13.98318 -13.68177 -12.95428 -12.84984 -12.21020 -12.07690 -11.97159 -11.53533 -11.46190 -11.37081 -11.21702 -10.94369 -10.83665 -10.71485 -10.39385 -9.79142 -9.57017 -9.08320 -8.97977 -8.78962 -8.38487 -6.94559 -5.88968 -3.33802 0.85017 1.27215 1.76075 3.33606 3.48356 3.50816 3.77600 4.38958 4.42391 4.50231 4.56860 4.58521 4.92652 5.26372 5.29185 5.46775 5.51281 5.65893 5.72669 5.87367 5.91850 5.95391 6.04178 6.07608 6.19900 6.38906 6.48505 6.63074 7.30592 7.88405 7.95942 8.09762 8.45535 9.00180 9.77257 10.05439 11.26431 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.024214 B = 0.006244 C = 0.005895 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1156.055844 B = 4483.460441 C = 4748.330993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.345 6.345 3 C 0.043 3.957 4 C 0.128 3.872 5 N -0.582 5.582 6 C -0.257 4.257 7 H 0.085 0.915 8 C 0.047 3.953 9 N -0.893 5.893 10 Si 0.872 3.128 11 H -0.287 1.287 12 H -0.302 1.302 13 H -0.270 1.270 14 C 0.188 3.812 15 C 0.096 3.904 16 C 0.063 3.937 17 N -0.438 5.438 18 C 0.100 3.900 19 Cl -0.034 7.034 20 C 0.079 3.921 21 N -0.398 5.398 22 H 0.027 0.973 23 H 0.025 0.975 24 H 0.079 0.921 25 H 0.030 0.970 26 H 0.034 0.966 27 H 0.068 0.932 28 H 0.059 0.941 29 H 0.261 0.739 30 H 0.082 0.918 31 H 0.066 0.934 32 H 0.170 0.830 33 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.634 11.150 -5.707 13.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.262 6.262 3 C -0.037 4.037 4 C 0.002 3.998 5 N -0.302 5.302 6 C -0.385 4.385 7 H 0.102 0.898 8 C -0.154 4.154 9 N -0.534 5.534 10 Si 0.702 3.298 11 H -0.215 1.215 12 H -0.230 1.230 13 H -0.195 1.195 14 C 0.060 3.940 15 C -0.047 4.047 16 C -0.098 4.098 17 N -0.154 5.154 18 C -0.067 4.067 19 Cl -0.006 7.006 20 C -0.082 4.082 21 N -0.113 5.113 22 H 0.046 0.954 23 H 0.044 0.956 24 H 0.097 0.903 25 H 0.048 0.952 26 H 0.052 0.948 27 H 0.086 0.914 28 H 0.077 0.923 29 H 0.071 0.929 30 H 0.100 0.900 31 H 0.085 0.915 32 H 0.187 0.813 33 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges -5.580 10.784 -5.692 13.410 hybrid contribution -0.267 0.639 0.791 1.051 sum -5.846 11.423 -4.901 13.736 Atomic orbital electron populations 1.22631 0.83749 1.01896 0.98194 1.88309 1.16904 1.26262 1.94772 1.23316 0.97358 0.85328 0.97660 1.21505 0.90387 0.96896 0.90987 1.44027 1.75528 1.04145 1.06502 1.18668 1.38433 0.79189 1.02215 0.89774 1.25297 0.97791 0.94799 0.97493 1.69872 1.44911 1.08105 1.30497 0.87032 0.81052 0.79448 0.82236 1.21537 1.23046 1.19482 1.19891 0.90580 0.95714 0.87838 1.24052 0.99563 0.88608 0.92520 1.23527 0.89823 0.99288 0.97176 1.67643 1.18632 1.25937 1.03230 1.22711 0.92552 0.95129 0.96301 1.98386 1.40165 1.98114 1.63962 1.23680 0.90174 0.96249 0.98118 1.68635 1.16331 1.23902 1.02439 0.95411 0.95599 0.90257 0.95204 0.94753 0.91419 0.92282 0.92916 0.90005 0.91540 0.81342 0.81172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 32. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.58 11.01 101.05 1.11 1.69 16 2 O -0.35 -7.74 10.18 -35.23 -0.36 -8.09 16 3 C 0.04 0.81 6.28 37.16 0.23 1.04 16 4 C 0.13 2.58 4.97 -4.04 -0.02 2.56 16 5 N -0.58 -12.81 2.06 -174.62 -0.36 -13.17 16 6 C -0.26 -6.94 9.41 -15.06 -0.14 -7.08 16 7 H 0.08 2.55 8.06 -52.48 -0.42 2.13 16 8 C 0.05 1.33 5.31 -17.43 -0.09 1.23 16 9 N -0.89 -27.26 13.97 55.49 0.78 -26.49 16 10 Si 0.87 21.51 25.03 -169.99 -4.25 17.26 16 11 H -0.29 -6.98 6.66 56.52 0.38 -6.60 16 12 H -0.30 -7.67 7.11 56.52 0.40 -7.27 16 13 H -0.27 -6.30 7.11 56.52 0.40 -5.89 16 14 C 0.19 3.34 6.05 -5.20 -0.03 3.31 16 15 C 0.10 1.67 6.23 -82.42 -0.51 1.15 16 16 C 0.06 0.96 9.11 -17.37 -0.16 0.81 16 17 N -0.44 -6.97 10.49 -10.17 -0.11 -7.08 16 18 C 0.10 1.53 7.29 -17.27 -0.13 1.40 16 19 Cl -0.03 -0.44 29.13 -51.86 -1.51 -1.95 16 20 C 0.08 1.24 11.01 -17.32 -0.19 1.05 16 21 N -0.40 -7.35 10.42 -9.26 -0.10 -7.45 16 22 H 0.03 0.42 8.14 -51.93 -0.42 0.00 16 23 H 0.03 0.44 8.14 -51.93 -0.42 0.01 16 24 H 0.08 1.35 8.14 -51.93 -0.42 0.93 16 25 H 0.03 0.49 8.14 -51.93 -0.42 0.07 16 26 H 0.03 0.61 6.08 -51.93 -0.32 0.29 16 27 H 0.07 1.56 3.22 -51.93 -0.17 1.39 16 28 H 0.06 0.96 7.86 -51.93 -0.41 0.55 16 29 H 0.26 7.59 8.31 -40.82 -0.34 7.25 16 30 H 0.08 1.50 8.08 -51.93 -0.42 1.08 16 31 H 0.07 0.93 7.74 -51.93 -0.40 0.52 16 32 H 0.17 2.05 7.98 -52.48 -0.42 1.63 16 33 H 0.17 2.19 8.06 -52.49 -0.42 1.77 16 LS Contribution 296.78 15.07 4.47 4.47 Total: -1.00 -32.28 296.78 -5.20 -37.48 By element: Atomic # 1 Polarization: 1.69 SS G_CDS: -3.83 Total: -2.14 kcal Atomic # 6 Polarization: 7.09 SS G_CDS: 0.07 Total: 7.16 kcal Atomic # 7 Polarization: -54.40 SS G_CDS: 0.21 Total: -54.19 kcal Atomic # 8 Polarization: -7.74 SS G_CDS: -0.36 Total: -8.09 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -4.25 Total: 17.26 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -1.51 Total: -1.95 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -32.28 -5.20 -37.48 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001194899433.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.296 kcal (2) G-P(sol) polarization free energy of solvation -32.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.476 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.820 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds