Wall clock time and date at job start Mon Mar 30 2020 01:07:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53002 * 109.47320 * 2 1 4 4 C 1.52994 * 109.47320 * 179.97438 * 3 2 1 5 5 N 1.46502 * 109.47257 * 180.02562 * 4 3 2 6 6 C 1.36994 * 119.99843 * 270.00173 * 5 4 3 7 7 H 1.07994 * 120.00022 * 126.19500 * 6 5 4 8 8 C 1.38970 * 119.99534 * 306.19850 * 6 5 4 9 9 N 1.31417 * 119.99639 * 174.21052 * 8 6 5 10 10 Si 1.86797 * 120.00267 * 354.20826 * 8 6 5 11 11 H 1.48502 * 109.47235 * 94.97171 * 10 8 6 12 12 H 1.48501 * 109.46917 * 214.96952 * 10 8 6 13 13 H 1.48492 * 109.47134 * 334.96876 * 10 8 6 14 14 C 1.34775 * 120.00545 * 89.99682 * 5 4 3 15 15 O 1.21632 * 119.99382 * 3.26395 * 14 5 4 16 16 C 1.47311 * 120.00414 * 183.53327 * 14 5 4 17 17 C 1.38130 * 126.42707 * 351.92331 * 16 14 5 18 18 N 1.34265 * 107.42285 * 179.83380 * 17 16 14 19 19 H 0.97006 * 125.73438 * 180.15911 * 18 17 16 20 20 N 1.39922 * 108.52686 * 0.43052 * 18 17 16 21 21 C 1.30530 * 108.91487 * 359.72609 * 20 18 17 22 22 Cl 1.73598 * 126.00390 * 180.02562 * 21 20 18 23 23 H 1.09010 * 109.47240 * 299.99800 * 1 2 3 24 24 H 1.09003 * 109.47480 * 59.99893 * 1 2 3 25 25 H 1.08995 * 109.47573 * 179.97438 * 1 2 3 26 26 H 1.08993 * 109.47139 * 240.00404 * 2 1 3 27 27 H 1.09003 * 109.47480 * 120.00107 * 2 1 3 28 28 H 1.09010 * 109.46801 * 59.99931 * 3 2 1 29 29 H 1.08997 * 109.47529 * 300.00782 * 3 2 1 30 30 H 1.08993 * 109.47139 * 60.00404 * 4 3 2 31 31 H 1.09003 * 109.47480 * 300.00107 * 4 3 2 32 32 H 0.97002 * 119.99942 * 180.02562 * 9 8 6 33 33 H 1.07998 * 126.29057 * 0.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 3.5699 1.4425 0.0006 5 7 4.0583 2.8237 0.0013 6 6 4.2871 3.4698 -1.1849 7 1 3.8250 4.4270 -1.3763 8 6 5.1138 2.8935 -2.1418 9 7 5.2435 3.4557 -3.3225 10 14 6.0406 1.3197 -1.7498 11 1 5.2602 0.1523 -2.2328 12 1 7.3637 1.3436 -2.4235 13 1 6.2346 1.2122 -0.2815 14 6 4.2824 3.4588 1.1687 15 8 4.1362 2.8665 2.2209 16 6 4.6987 4.8719 1.1704 17 6 5.0484 5.6253 0.0668 18 7 5.3572 6.8572 0.5025 19 1 5.6375 7.6011 -0.0535 20 7 5.2126 6.8860 1.8939 21 6 4.8210 5.7099 2.3030 22 17 4.5053 5.2547 3.9482 23 1 -0.3634 0.5138 0.8901 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 1.8933 -0.5137 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 1.6766 1.9563 0.8901 29 1 1.6766 1.9564 -0.8899 30 1 3.9336 0.9286 -0.8891 31 1 3.9330 0.9288 0.8908 32 1 5.8202 3.0532 -3.9906 33 1 5.0668 5.2867 -0.9586 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001194956921.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:19 Heat of formation + Delta-G solvation = 34.261854 kcal Electronic energy + Delta-G solvation = -19035.502154 eV Core-core repulsion = 15931.163855 eV Total energy + Delta-G solvation = -3104.338299 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.78093 -38.48399 -36.22014 -35.43703 -34.13408 -32.01124 -30.94394 -30.21918 -28.13042 -25.10515 -23.61644 -21.90558 -21.04300 -20.65644 -19.20125 -18.29374 -16.07739 -15.99813 -15.07369 -14.77084 -14.71518 -14.65200 -14.09163 -13.84535 -13.16576 -12.75189 -12.66372 -12.55908 -12.17237 -11.72867 -11.58059 -11.45161 -11.22811 -11.06721 -10.68235 -10.64253 -10.33551 -10.24510 -10.06128 -9.79926 -9.19280 -8.99266 -8.69485 -8.19416 -7.61260 -6.60143 -4.42582 2.03754 2.19002 2.56904 3.02345 3.17035 3.26999 3.56073 4.03821 4.35745 4.44714 4.80945 5.33706 5.35997 5.39796 5.52653 5.81709 5.89534 6.11259 6.12218 6.16052 6.19397 6.24695 6.31630 6.43120 6.50482 6.69778 6.81193 6.92464 7.40254 7.57714 7.82524 7.94706 8.08701 8.84212 9.28399 9.67825 10.45475 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.014837 B = 0.008358 C = 0.006150 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1886.699386 B = 3349.318509 C = 4551.653152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.123 4.123 3 C -0.126 4.126 4 C 0.109 3.891 5 N -0.473 5.473 6 C -0.350 4.350 7 H 0.105 0.895 8 C 0.071 3.929 9 N -0.868 5.868 10 Si 0.883 3.117 11 H -0.272 1.272 12 H -0.288 1.288 13 H -0.257 1.257 14 C 0.568 3.432 15 O -0.581 6.581 16 C -0.259 4.259 17 C 0.127 3.873 18 N -0.467 5.467 19 H 0.442 0.558 20 N -0.312 5.312 21 C 0.167 3.833 22 Cl 0.013 6.987 23 H 0.052 0.948 24 H 0.052 0.948 25 H 0.048 0.952 26 H 0.058 0.942 27 H 0.059 0.941 28 H 0.061 0.939 29 H 0.067 0.933 30 H 0.060 0.940 31 H 0.068 0.932 32 H 0.278 0.722 33 H 0.237 0.763 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.213 0.581 2.870 3.670 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.162 4.162 3 C -0.165 4.165 4 C -0.013 4.013 5 N -0.195 5.195 6 C -0.477 4.477 7 H 0.122 0.878 8 C -0.138 4.138 9 N -0.503 5.503 10 Si 0.710 3.290 11 H -0.198 1.198 12 H -0.214 1.214 13 H -0.180 1.180 14 C 0.358 3.642 15 O -0.464 6.464 16 C -0.274 4.274 17 C -0.023 4.023 18 N -0.175 5.175 19 H 0.287 0.713 20 N -0.138 5.138 21 C -0.027 4.027 22 Cl 0.040 6.960 23 H 0.071 0.929 24 H 0.072 0.928 25 H 0.067 0.933 26 H 0.077 0.923 27 H 0.077 0.923 28 H 0.080 0.920 29 H 0.086 0.914 30 H 0.078 0.922 31 H 0.087 0.913 32 H 0.088 0.912 33 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -1.935 1.374 3.717 4.409 hybrid contribution 0.416 -1.188 -0.597 1.393 sum -1.519 0.185 3.120 3.475 Atomic orbital electron populations 1.21742 0.96254 1.00840 1.01719 1.21483 0.95509 0.97564 1.01597 1.21871 0.96268 0.95871 1.02475 1.21546 0.93625 0.85381 1.00790 1.43393 1.59167 1.11731 1.05199 1.19051 1.29125 1.07057 0.92497 0.87787 1.25550 0.95247 0.98129 0.94835 1.69643 1.36663 1.40029 1.03971 0.86710 0.79222 0.82851 0.80227 1.19849 1.21450 1.18032 1.17382 0.78179 0.84847 0.83803 1.90659 1.56541 1.67651 1.31584 1.20119 1.19410 0.97382 0.90467 1.25510 0.91128 0.82701 1.02939 1.46155 1.54300 1.12168 1.04842 0.71295 1.76925 1.25995 1.19983 0.90915 1.22619 0.99743 0.91991 0.88306 1.98369 1.93524 1.90994 1.13073 0.92910 0.92844 0.93336 0.92319 0.92250 0.92015 0.91388 0.92229 0.91316 0.91191 0.74751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.92 9.91 37.15 0.37 -1.55 16 2 C -0.12 -1.87 5.93 -26.73 -0.16 -2.03 16 3 C -0.13 -2.32 5.54 -26.73 -0.15 -2.46 16 4 C 0.11 2.30 4.02 -4.04 -0.02 2.29 16 5 N -0.47 -10.83 1.95 -116.07 -0.23 -11.05 16 6 C -0.35 -8.10 6.79 -14.97 -0.10 -8.21 16 7 H 0.11 2.45 6.07 -52.49 -0.32 2.13 16 8 C 0.07 1.68 5.45 -17.46 -0.10 1.59 16 9 N -0.87 -21.31 13.96 55.50 0.77 -20.53 16 10 Si 0.88 19.51 24.90 -169.99 -4.23 15.27 16 11 H -0.27 -5.84 6.98 56.52 0.39 -5.45 16 12 H -0.29 -6.37 7.11 56.52 0.40 -5.96 16 13 H -0.26 -5.92 6.94 56.52 0.39 -5.52 16 14 C 0.57 13.35 7.63 -12.57 -0.10 13.26 16 15 O -0.58 -14.51 15.31 5.25 0.08 -14.43 16 16 C -0.26 -5.55 6.03 -105.04 -0.63 -6.18 16 17 C 0.13 2.37 10.26 -16.53 -0.17 2.20 16 18 N -0.47 -7.46 7.28 30.87 0.22 -7.24 16 19 H 0.44 5.15 8.96 -182.73 -1.64 3.51 16 20 N -0.31 -5.80 12.63 33.18 0.42 -5.38 16 21 C 0.17 3.38 7.88 -16.90 -0.13 3.25 16 22 Cl 0.01 0.24 28.03 -51.86 -1.45 -1.22 16 23 H 0.05 0.67 8.14 -51.92 -0.42 0.25 16 24 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 25 H 0.05 0.55 8.14 -51.93 -0.42 0.12 16 26 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 27 H 0.06 0.87 8.14 -51.93 -0.42 0.45 16 28 H 0.06 1.18 8.14 -51.92 -0.42 0.76 16 29 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 30 H 0.06 1.26 4.31 -51.93 -0.22 1.04 16 31 H 0.07 1.47 7.38 -51.93 -0.38 1.09 16 32 H 0.28 6.50 8.31 -40.82 -0.34 6.16 16 33 H 0.24 4.53 4.76 -52.49 -0.25 4.28 16 LS Contribution 291.32 15.07 4.39 4.39 Total: -1.00 -27.51 291.32 -6.13 -33.64 By element: Atomic # 1 Polarization: 9.32 SS G_CDS: -4.92 Total: 4.40 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -1.18 Total: 2.14 kcal Atomic # 7 Polarization: -45.40 SS G_CDS: 1.19 Total: -44.20 kcal Atomic # 8 Polarization: -14.51 SS G_CDS: 0.08 Total: -14.43 kcal Atomic # 14 Polarization: 19.51 SS G_CDS: -4.23 Total: 15.27 kcal Atomic # 17 Polarization: 0.24 SS G_CDS: -1.45 Total: -1.22 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -27.51 -6.13 -33.64 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001194956921.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.904 kcal (2) G-P(sol) polarization free energy of solvation -27.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.392 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.130 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.643 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds