Wall clock time and date at job start Mon Mar 30 2020 00:51:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35918 * 116.99793 * 2 1 4 4 C 1.39133 * 120.47403 * 0.20640 * 3 2 1 5 5 C 1.38538 * 118.37537 * 180.23828 * 4 3 2 6 6 C 1.38250 * 119.22004 * 359.53705 * 5 4 3 7 7 N 1.31849 * 120.88785 * 0.24657 * 6 5 4 8 8 C 1.31841 * 121.77895 * 0.02562 * 7 6 5 9 9 C 1.50698 * 119.65818 * 180.02562 * 8 7 6 10 10 O 1.42907 * 109.47356 * 89.99751 * 9 8 7 11 11 C 1.42903 * 113.99789 * 179.97438 * 10 9 8 12 12 H 1.08996 * 109.47322 * 30.00112 * 11 10 9 13 13 C 1.50703 * 109.46442 * 149.99712 * 11 10 9 14 14 H 1.07995 * 120.00644 * 5.45962 * 13 11 10 15 15 C 1.37875 * 119.99576 * 185.45125 * 13 11 10 16 16 N 1.31515 * 120.00262 * 9.49304 * 15 13 11 17 17 Si 1.86798 * 119.99931 * 189.49386 * 15 13 11 18 18 H 1.48499 * 109.47710 * 84.99428 * 17 15 13 19 19 H 1.48504 * 109.47507 * 204.99699 * 17 15 13 20 20 H 1.48504 * 109.47412 * 324.99259 * 17 15 13 21 21 C 1.52999 * 109.47040 * 269.99445 * 11 10 9 22 22 Cl 1.80297 * 109.46739 * 66.36498 * 21 11 10 23 23 H 1.08995 * 109.47315 * 300.00446 * 1 2 3 24 24 H 1.09004 * 109.46876 * 60.00355 * 1 2 3 25 25 H 1.09004 * 109.47012 * 180.02562 * 1 2 3 26 26 H 1.08007 * 120.81430 * 0.02562 * 4 3 2 27 27 H 1.08003 * 120.39038 * 179.80664 * 5 4 3 28 28 H 1.07995 * 119.55572 * 180.22365 * 6 5 4 29 29 H 1.09007 * 109.47246 * 209.99447 * 9 8 7 30 30 H 1.09003 * 109.47097 * 329.99443 * 9 8 7 31 31 H 0.96998 * 120.00268 * 179.97438 * 16 15 13 32 32 H 1.08995 * 109.46691 * 186.35844 * 21 11 10 33 33 H 1.08988 * 109.47221 * 306.36211 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2111 0.0000 4 6 1.2979 2.3841 0.0043 5 6 1.9715 3.5947 -0.0009 6 6 3.3540 3.5977 -0.0005 7 7 4.0334 2.4677 0.0000 8 6 3.4306 1.2952 -0.0004 9 6 4.2543 0.0332 0.0007 10 8 4.5132 -0.3654 1.3484 11 6 5.2912 -1.5587 1.4623 12 1 5.9587 -1.6405 0.6044 13 6 6.1056 -1.5082 2.7293 14 1 5.9712 -0.6938 3.4257 15 6 7.0223 -2.5020 2.9996 16 7 7.3226 -3.3886 2.0758 17 14 7.8377 -2.5892 4.6779 18 1 6.9626 -3.3381 5.6152 19 1 9.1444 -3.2846 4.5580 20 1 8.0546 -1.2141 5.1950 21 6 4.3606 -2.7724 1.5021 22 17 3.5235 -2.9401 -0.0859 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3633 -1.0277 0.0005 26 1 0.2183 2.3518 0.0081 27 1 1.4232 4.5251 -0.0010 28 1 3.8847 4.5383 -0.0009 29 1 3.7081 -0.7577 -0.5135 30 1 5.1987 0.2153 -0.5122 31 1 7.9677 -4.0875 2.2658 32 1 4.9441 -3.6711 1.7019 33 1 3.6204 -2.6370 2.2906 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001223353582.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:51:12 Heat of formation + Delta-G solvation = -59.512344 kcal Electronic energy + Delta-G solvation = -18724.137553 eV Core-core repulsion = 15583.440149 eV Total energy + Delta-G solvation = -3140.697405 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.076 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.51152 -37.96608 -36.99259 -34.67245 -33.27814 -32.20774 -30.94508 -29.05752 -27.41286 -25.99893 -25.06061 -22.72913 -21.80403 -20.86765 -17.98983 -17.00260 -16.75322 -16.02336 -15.83861 -15.47705 -14.46410 -14.41868 -14.11914 -13.93872 -13.50727 -13.36309 -12.92134 -12.42415 -12.15565 -12.02787 -11.46375 -11.37861 -11.22540 -10.96450 -10.89986 -10.72925 -10.30688 -9.88607 -9.64494 -9.35906 -9.27561 -9.22388 -8.51003 -8.20398 -8.02013 -6.24733 -4.27905 1.22242 1.41228 3.23549 3.30970 3.31367 3.35061 3.50116 3.85869 4.28997 4.51898 4.74105 4.76438 5.01955 5.09509 5.12300 5.16051 5.34725 5.42902 5.47650 5.84805 5.98079 6.12155 6.33281 6.38795 6.41674 6.54508 6.64612 6.85769 7.33755 7.37586 7.72681 8.02576 8.23220 8.45263 8.90411 9.38099 10.83579 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021119 B = 0.005898 C = 0.005009 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1325.524939 B = 4746.081791 C = 5588.882066 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.289 6.289 3 C 0.097 3.903 4 C -0.174 4.174 5 C -0.139 4.139 6 C 0.054 3.946 7 N -0.432 5.432 8 C 0.120 3.880 9 C 0.105 3.895 10 O -0.378 6.378 11 C 0.213 3.787 12 H 0.040 0.960 13 C -0.515 4.515 14 H 0.072 0.928 15 C 0.063 3.937 16 N -0.886 5.886 17 Si 0.906 3.094 18 H -0.277 1.277 19 H -0.285 1.285 20 H -0.271 1.271 21 C -0.023 4.023 22 Cl -0.242 7.242 23 H 0.053 0.947 24 H 0.051 0.949 25 H 0.101 0.899 26 H 0.136 0.864 27 H 0.133 0.867 28 H 0.156 0.844 29 H 0.084 0.916 30 H 0.054 0.946 31 H 0.268 0.732 32 H 0.107 0.893 33 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.691 8.069 -4.774 15.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.200 6.200 3 C 0.048 3.952 4 C -0.200 4.200 5 C -0.159 4.159 6 C -0.103 4.103 7 N -0.143 5.143 8 C -0.021 4.021 9 C 0.027 3.973 10 O -0.297 6.297 11 C 0.157 3.843 12 H 0.057 0.943 13 C -0.553 4.553 14 H 0.090 0.910 15 C -0.140 4.140 16 N -0.523 5.523 17 Si 0.733 3.267 18 H -0.203 1.203 19 H -0.210 1.210 20 H -0.196 1.196 21 C -0.086 4.086 22 Cl -0.216 7.216 23 H 0.072 0.928 24 H 0.070 0.930 25 H 0.120 0.880 26 H 0.154 0.846 27 H 0.151 0.849 28 H 0.173 0.827 29 H 0.101 0.899 30 H 0.072 0.928 31 H 0.078 0.922 32 H 0.125 0.875 33 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -11.712 7.797 -4.756 14.852 hybrid contribution -0.788 -0.095 0.639 1.019 sum -12.500 7.702 -4.117 15.249 Atomic orbital electron populations 1.23082 0.78980 1.04180 1.00756 1.86309 1.20679 1.25250 1.87751 1.19972 0.93252 0.85224 0.96713 1.21640 1.00486 0.92229 1.05690 1.21922 0.95787 0.97969 1.00244 1.22634 0.91356 0.96513 0.99778 1.67600 1.40061 0.97541 1.09065 1.20793 0.88211 0.94071 0.98986 1.21373 0.97340 0.90845 0.87720 1.87895 1.74051 1.45312 1.22417 1.19995 0.86885 0.78599 0.98860 0.94263 1.21012 1.19783 1.09591 1.04918 0.90998 1.24989 0.95758 0.95538 0.97722 1.69966 1.33375 1.16531 1.32433 0.86367 0.78457 0.78572 0.83317 1.20268 1.21022 1.19551 1.25719 0.96407 1.05179 0.81296 1.98606 1.83280 1.97992 1.41770 0.92822 0.93031 0.88014 0.84581 0.84885 0.82716 0.89868 0.92832 0.92239 0.87492 0.90825 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.83 101.05 0.99 1.26 16 2 O -0.29 -4.63 9.55 -19.48 -0.19 -4.81 16 3 C 0.10 1.60 6.67 -39.08 -0.26 1.34 16 4 C -0.17 -2.23 9.14 -39.14 -0.36 -2.59 16 5 C -0.14 -1.65 10.11 -39.47 -0.40 -2.05 16 6 C 0.05 0.76 11.18 -17.54 -0.20 0.57 16 7 N -0.43 -7.99 10.27 -9.35 -0.10 -8.09 16 8 C 0.12 2.31 6.43 -82.42 -0.53 1.78 16 9 C 0.10 2.26 5.62 36.00 0.20 2.46 16 10 O -0.38 -9.41 9.94 -35.23 -0.35 -9.76 16 11 C 0.21 5.53 2.23 -27.88 -0.06 5.47 16 12 H 0.04 1.10 7.73 -51.93 -0.40 0.70 16 13 C -0.52 -14.30 8.81 -34.44 -0.30 -14.60 16 14 H 0.07 2.04 7.83 -52.49 -0.41 1.62 16 15 C 0.06 1.70 5.14 -17.82 -0.09 1.61 16 16 N -0.89 -24.47 12.17 55.43 0.67 -23.79 16 17 Si 0.91 20.87 29.55 -169.99 -5.02 15.85 16 18 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 19 H -0.28 -6.47 7.11 56.52 0.40 -6.06 16 20 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 21 C -0.02 -0.55 6.23 37.16 0.23 -0.31 16 22 Cl -0.24 -5.05 26.16 -51.86 -1.36 -6.41 16 23 H 0.05 0.50 7.69 -51.93 -0.40 0.10 16 24 H 0.05 0.44 7.71 -51.93 -0.40 0.04 16 25 H 0.10 0.94 8.14 -51.93 -0.42 0.51 16 26 H 0.14 1.30 6.45 -52.48 -0.34 0.96 16 27 H 0.13 1.08 8.06 -52.48 -0.42 0.65 16 28 H 0.16 1.67 8.06 -52.49 -0.42 1.25 16 29 H 0.08 1.75 4.53 -51.93 -0.24 1.51 16 30 H 0.05 1.17 8.09 -51.93 -0.42 0.75 16 31 H 0.27 7.00 8.31 -40.82 -0.34 6.66 16 32 H 0.11 2.67 6.78 -51.93 -0.35 2.32 16 33 H 0.07 1.68 8.14 -51.94 -0.42 1.26 16 LS Contribution 297.85 15.07 4.49 4.49 Total: -1.00 -30.62 297.85 -6.40 -37.02 By element: Atomic # 1 Polarization: 4.37 SS G_CDS: -3.78 Total: 0.58 kcal Atomic # 6 Polarization: -4.30 SS G_CDS: -0.77 Total: -5.07 kcal Atomic # 7 Polarization: -32.46 SS G_CDS: 0.58 Total: -31.88 kcal Atomic # 8 Polarization: -14.04 SS G_CDS: -0.54 Total: -14.57 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -5.02 Total: 15.85 kcal Atomic # 17 Polarization: -5.05 SS G_CDS: -1.36 Total: -6.41 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -30.62 -6.40 -37.02 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001223353582.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.491 kcal (2) G-P(sol) polarization free energy of solvation -30.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.021 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds