Wall clock time and date at job start Mon Mar 30 2020 00:51:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35685 * 116.99944 * 2 1 4 4 N 1.32272 * 119.68376 * 0.02562 * 3 2 1 5 5 C 1.31930 * 121.64658 * 179.97438 * 4 3 2 6 6 C 1.38085 * 120.83544 * 0.02562 * 5 4 3 7 7 C 1.38783 * 119.28929 * 359.97313 * 6 5 4 8 8 C 1.38428 * 118.47978 * 359.73259 * 7 6 5 9 9 C 1.50700 * 120.43800 * 180.26201 * 8 7 6 10 10 O 1.42894 * 109.47713 * 0.29547 * 9 8 7 11 11 C 1.42894 * 114.00442 * 180.02562 * 10 9 8 12 12 H 1.09007 * 109.47307 * 29.99847 * 11 10 9 13 13 C 1.50700 * 109.47469 * 150.00000 * 11 10 9 14 14 H 1.07997 * 119.99821 * 359.97438 * 13 11 10 15 15 C 1.37884 * 120.00044 * 180.02562 * 13 11 10 16 16 N 1.31514 * 119.99733 * 359.97438 * 15 13 11 17 17 Si 1.86799 * 119.99634 * 179.97438 * 15 13 11 18 18 H 1.48503 * 109.47410 * 60.00003 * 17 15 13 19 19 H 1.48511 * 109.46787 * 179.97438 * 17 15 13 20 20 H 1.48499 * 109.47246 * 299.99494 * 17 15 13 21 21 C 1.53001 * 109.47152 * 269.99979 * 11 10 9 22 22 Cl 1.80296 * 109.46998 * 64.99734 * 21 11 10 23 23 H 1.09006 * 109.47331 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.47220 * 299.99758 * 1 2 3 25 25 H 1.08996 * 109.47672 * 59.99702 * 1 2 3 26 26 H 1.08010 * 119.58194 * 179.97438 * 5 4 3 27 27 H 1.08007 * 120.35517 * 179.97438 * 6 5 4 28 28 H 1.07997 * 120.75935 * 180.02562 * 7 6 5 29 29 H 1.09002 * 109.47277 * 120.29936 * 9 8 7 30 30 H 1.09007 * 109.47162 * 240.29078 * 9 8 7 31 31 H 0.96997 * 119.99347 * 180.02562 * 16 15 13 32 32 H 1.09002 * 109.47023 * 184.99637 * 21 11 10 33 33 H 1.08997 * 109.46914 * 304.99542 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2090 0.0000 4 7 1.3184 2.3143 0.0005 5 6 1.8767 3.5096 0.0010 6 6 3.2505 3.6491 0.0005 7 6 4.0483 2.5135 0.0000 8 6 3.4321 1.2740 0.0057 9 6 4.2557 0.0120 0.0114 10 8 5.6443 0.3493 0.0167 11 6 6.5173 -0.7820 0.0217 12 1 6.0368 -1.6141 -0.4930 13 6 7.8012 -0.4289 -0.6839 14 1 7.9368 0.5603 -1.0954 15 6 8.8024 -1.3692 -0.8050 16 7 8.6371 -2.5739 -0.3042 17 14 10.3936 -0.9316 -1.6802 18 1 11.0488 0.2018 -0.9792 19 1 11.3010 -2.1073 -1.6748 20 1 10.0965 -0.5415 -3.0819 21 6 6.8229 -1.1838 1.4660 22 17 5.3086 -1.7463 2.2666 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 1.2513 4.3902 0.0010 27 1 3.6993 4.6315 0.0006 28 1 5.1251 2.5950 0.0001 29 1 4.0202 -0.5717 0.9014 30 1 4.0277 -0.5748 -0.8786 31 1 9.3416 -3.2352 -0.3891 32 1 7.5575 -1.9892 1.4713 33 1 7.2217 -0.3248 2.0055 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001223780458.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:51:08 Heat of formation + Delta-G solvation = -63.121117 kcal Electronic energy + Delta-G solvation = -18533.830391 eV Core-core repulsion = 15392.976498 eV Total energy + Delta-G solvation = -3140.853893 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.076 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.46953 -37.73766 -37.16103 -34.75379 -33.53553 -32.34186 -30.92530 -29.03269 -27.16526 -25.86441 -25.17990 -22.75026 -21.77713 -20.84534 -18.18988 -17.01922 -16.65524 -15.97602 -15.63187 -15.34186 -14.71132 -14.42363 -14.19063 -13.93911 -13.40346 -13.24758 -12.88977 -12.42114 -12.08582 -11.96789 -11.69323 -11.43369 -11.11188 -11.05377 -10.98481 -10.78242 -10.40576 -9.95466 -9.59314 -9.47152 -9.37755 -9.28936 -8.62159 -8.41460 -7.88511 -6.32876 -4.39423 1.33368 1.52023 3.18947 3.24789 3.25913 3.27270 3.48126 3.96306 4.15894 4.39076 4.71755 5.02650 5.14501 5.23904 5.30838 5.35190 5.46042 5.53975 5.68230 5.91259 6.15430 6.25286 6.31055 6.42093 6.45330 6.56976 6.72339 6.92191 7.30227 7.39463 7.62454 7.93543 7.98109 8.33492 8.77267 9.28332 10.74269 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021960 B = 0.005356 C = 0.004713 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1274.734250 B = 5226.247818 C = 5939.878300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.042 3.958 2 O -0.304 6.304 3 C 0.315 3.685 4 N -0.542 5.542 5 C 0.119 3.881 6 C -0.211 4.211 7 C -0.023 4.023 8 C -0.136 4.136 9 C 0.099 3.901 10 O -0.387 6.387 11 C 0.216 3.784 12 H 0.033 0.967 13 C -0.515 4.515 14 H 0.073 0.927 15 C 0.061 3.939 16 N -0.891 5.891 17 Si 0.912 3.088 18 H -0.273 1.273 19 H -0.285 1.285 20 H -0.273 1.273 21 C -0.032 4.032 22 Cl -0.249 7.249 23 H 0.093 0.907 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.154 0.846 27 H 0.134 0.866 28 H 0.154 0.846 29 H 0.082 0.918 30 H 0.054 0.946 31 H 0.270 0.730 32 H 0.128 0.872 33 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.599 7.050 1.256 12.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.210 6.210 3 C 0.136 3.864 4 N -0.266 5.266 5 C -0.036 4.036 6 C -0.231 4.231 7 C -0.048 4.048 8 C -0.139 4.139 9 C 0.022 3.978 10 O -0.307 6.307 11 C 0.160 3.840 12 H 0.051 0.949 13 C -0.553 4.553 14 H 0.091 0.909 15 C -0.142 4.142 16 N -0.529 5.529 17 Si 0.739 3.261 18 H -0.199 1.199 19 H -0.210 1.210 20 H -0.199 1.199 21 C -0.094 4.094 22 Cl -0.224 7.224 23 H 0.112 0.888 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.171 0.829 27 H 0.152 0.848 28 H 0.171 0.829 29 H 0.099 0.901 30 H 0.072 0.928 31 H 0.080 0.920 32 H 0.146 0.854 33 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -11.345 6.655 1.334 13.221 hybrid contribution 1.318 0.071 -0.329 1.360 sum -10.028 6.726 1.004 12.116 Atomic orbital electron populations 1.22800 0.77820 1.02674 1.02056 1.86295 1.22383 1.24510 1.87844 1.19533 0.88549 0.84715 0.93601 1.67267 1.40632 0.98766 1.19951 1.22259 0.92963 0.93401 0.94934 1.22001 0.94776 0.99829 1.06517 1.21451 1.01830 0.90087 0.91419 1.20025 0.90655 0.97514 1.05687 1.21280 0.82895 0.91887 1.01762 1.87748 1.13394 1.34467 1.95077 1.19988 0.89308 0.84842 0.89895 0.94923 1.21028 0.98749 0.99770 1.35787 0.90905 1.24996 0.99176 0.94594 0.95388 1.69804 1.34393 1.03885 1.44787 0.86310 0.81701 0.77960 0.80119 1.19878 1.21006 1.19867 1.25890 0.85002 1.02571 0.95948 1.98605 1.47180 1.92094 1.84507 0.88846 0.92582 0.92585 0.82878 0.84793 0.82858 0.90065 0.92849 0.92004 0.85427 0.91004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.50 10.38 101.05 1.05 1.55 16 2 O -0.30 -4.94 9.91 -18.76 -0.19 -5.13 16 3 C 0.31 5.36 7.47 -17.13 -0.13 5.23 16 4 N -0.54 -8.33 9.22 -13.33 -0.12 -8.45 16 5 C 0.12 1.54 11.18 -17.57 -0.20 1.35 16 6 C -0.21 -2.76 10.11 -39.44 -0.40 -3.16 16 7 C -0.02 -0.37 9.48 -39.31 -0.37 -0.74 16 8 C -0.14 -2.46 5.91 -104.32 -0.62 -3.07 16 9 C 0.10 2.00 5.42 36.01 0.20 2.20 16 10 O -0.39 -8.74 8.51 -35.23 -0.30 -9.04 16 11 C 0.22 5.32 2.38 -27.88 -0.07 5.25 16 12 H 0.03 0.87 7.79 -51.93 -0.40 0.47 16 13 C -0.52 -13.51 8.89 -34.44 -0.31 -13.82 16 14 H 0.07 1.91 7.81 -52.49 -0.41 1.50 16 15 C 0.06 1.57 5.29 -17.82 -0.09 1.48 16 16 N -0.89 -23.64 11.29 55.43 0.63 -23.01 16 17 Si 0.91 20.09 29.54 -169.99 -5.02 15.07 16 18 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 19 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 20 H -0.27 -6.01 7.11 56.52 0.40 -5.60 16 21 C -0.03 -0.73 6.17 37.16 0.23 -0.50 16 22 Cl -0.25 -5.22 26.09 -51.86 -1.35 -6.58 16 23 H 0.09 0.87 8.14 -51.93 -0.42 0.45 16 24 H 0.06 0.64 8.10 -51.93 -0.42 0.22 16 25 H 0.06 0.63 8.10 -51.93 -0.42 0.21 16 26 H 0.15 1.42 8.06 -52.48 -0.42 0.99 16 27 H 0.13 1.34 8.06 -52.48 -0.42 0.92 16 28 H 0.15 2.54 7.11 -52.49 -0.37 2.17 16 29 H 0.08 1.68 5.09 -51.93 -0.26 1.41 16 30 H 0.05 1.10 8.08 -51.93 -0.42 0.68 16 31 H 0.27 6.82 8.31 -40.82 -0.34 6.48 16 32 H 0.13 3.18 5.95 -51.93 -0.31 2.87 16 33 H 0.07 1.61 8.14 -51.93 -0.42 1.19 16 LS Contribution 297.30 15.07 4.48 4.48 Total: -1.00 -27.85 297.30 -6.43 -34.28 By element: Atomic # 1 Polarization: 6.46 SS G_CDS: -3.85 Total: 2.61 kcal Atomic # 6 Polarization: -3.53 SS G_CDS: -0.70 Total: -4.23 kcal Atomic # 7 Polarization: -31.97 SS G_CDS: 0.50 Total: -31.46 kcal Atomic # 8 Polarization: -13.68 SS G_CDS: -0.49 Total: -14.17 kcal Atomic # 14 Polarization: 20.09 SS G_CDS: -5.02 Total: 15.07 kcal Atomic # 17 Polarization: -5.22 SS G_CDS: -1.35 Total: -6.58 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -27.85 -6.43 -34.28 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001223780458.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.843 kcal (2) G-P(sol) polarization free energy of solvation -27.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.278 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds