Wall clock time and date at job start Mon Mar 30 2020 01:29:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.46510 * 119.99904 * 2 1 4 4 C 1.39237 * 120.00332 * 179.97438 * 2 1 3 5 5 C 1.39613 * 121.07317 * 179.97438 * 4 2 1 6 6 N 1.31638 * 119.83569 * 180.02562 * 5 4 2 7 7 N 1.28312 * 122.34724 * 359.74139 * 6 5 4 8 8 C 1.32453 * 122.30538 * 0.53874 * 7 6 5 9 9 O 1.35708 * 120.08782 * 179.74563 * 8 7 6 10 10 C 1.42899 * 116.99875 * 359.72228 * 9 8 7 11 11 H 1.09002 * 109.46851 * 30.00585 * 10 9 8 12 12 C 1.50703 * 109.46777 * 150.00077 * 10 9 8 13 13 H 1.07992 * 120.00200 * 95.13231 * 12 10 9 14 14 C 1.37879 * 119.99927 * 275.12745 * 12 10 9 15 15 N 1.31516 * 119.99755 * 356.00520 * 14 12 10 16 16 Si 1.86797 * 119.99925 * 175.72945 * 14 12 10 17 17 H 1.48497 * 109.47411 * 60.00301 * 16 14 12 18 18 H 1.48506 * 109.47002 * 180.02562 * 16 14 12 19 19 H 1.48499 * 109.47131 * 299.99786 * 16 14 12 20 20 C 1.52995 * 109.47470 * 269.99998 * 10 9 8 21 21 Cl 1.80296 * 109.47177 * 65.71695 * 20 10 9 22 22 C 1.38951 * 119.82271 * 359.46996 * 8 7 6 23 23 H 1.09002 * 109.47213 * 239.99732 * 1 2 3 24 24 H 1.08994 * 109.47489 * 0.02562 * 1 2 3 25 25 H 1.09000 * 109.47143 * 120.00046 * 1 2 3 26 26 H 1.09000 * 109.47007 * 269.99779 * 3 2 1 27 27 H 1.08999 * 109.46709 * 29.99677 * 3 2 1 28 28 H 1.08995 * 109.47290 * 150.00045 * 3 2 1 29 29 H 1.08002 * 120.08015 * 0.02562 * 5 4 2 30 30 H 0.96993 * 120.00541 * 5.29462 * 15 14 12 31 31 H 1.08995 * 109.47515 * 185.71720 * 20 10 9 32 32 H 1.09003 * 109.47297 * 305.71806 * 20 10 9 33 33 H 1.07996 * 121.08524 * 180.22409 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.1612 -1.2058 0.0005 5 6 3.5571 -1.2319 0.0000 6 7 4.1906 -2.3858 0.0000 7 7 3.5707 -3.5092 0.0054 8 6 2.2486 -3.5883 0.0008 9 8 1.6395 -4.8010 0.0016 10 6 2.4861 -5.9522 0.0014 11 1 3.4187 -5.7174 0.5146 12 6 1.7929 -7.0856 0.7127 13 1 1.2350 -7.8172 0.1473 14 6 1.8712 -7.1886 2.0854 15 7 2.6146 -6.3444 2.7668 16 14 0.9152 -8.5224 2.9779 17 1 1.3545 -9.8553 2.4926 18 1 1.1668 -8.4191 4.4378 19 1 -0.5361 -8.3527 2.7130 20 6 2.7873 -6.3635 -1.4411 21 17 3.7632 -5.0763 -2.2419 22 6 1.4869 -2.4262 0.0009 23 1 -0.3634 -0.5139 0.8900 24 1 -0.3634 1.0276 -0.0005 25 1 -0.3633 -0.5138 -0.8900 26 1 2.3792 1.5834 -1.0277 27 1 1.6083 2.0284 0.5138 28 1 3.1499 1.1385 0.5138 29 1 4.1158 -0.3076 -0.0004 30 1 3.0462 -5.6033 2.3139 31 1 3.3478 -7.2984 -1.4429 32 1 1.8515 -6.5000 -1.9830 33 1 0.4077 -2.4668 0.0008 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001229219486.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:29:51 Heat of formation + Delta-G solvation = 15.511234 kcal Electronic energy + Delta-G solvation = -18907.933329 eV Core-core repulsion = 15802.781942 eV Total energy + Delta-G solvation = -3105.151387 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.43835 -37.94073 -36.80926 -34.97600 -33.42573 -31.47218 -30.81607 -29.56473 -28.35747 -25.58392 -24.75148 -23.39677 -22.24782 -20.77045 -17.96635 -17.52126 -16.61866 -16.25079 -15.48321 -15.22162 -14.81153 -14.49882 -13.90316 -13.83785 -13.49810 -13.02470 -12.95731 -12.78481 -12.50029 -12.11138 -11.93047 -11.87661 -11.30593 -10.95694 -10.62924 -10.45224 -10.31655 -10.18276 -9.68203 -9.49968 -9.10253 -8.87781 -8.52489 -7.99859 -7.59446 -6.69984 -4.54421 1.60707 1.88458 2.92696 3.15409 3.30863 3.35075 3.52974 4.03408 4.35424 4.38193 4.78126 4.92289 4.95586 5.06062 5.18284 5.22997 5.44244 5.45238 5.50210 5.54744 5.62374 5.87049 5.93058 6.12209 6.18448 6.45319 6.50460 6.95355 7.06315 7.28172 7.64194 8.07794 8.41187 8.50647 9.27222 9.59301 10.67433 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.019261 B = 0.006383 C = 0.005370 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1453.388398 B = 4385.758043 C = 5212.915255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.624 5.624 3 C 0.092 3.908 4 C 0.228 3.772 5 C -0.077 4.077 6 N -0.176 5.176 7 N -0.317 5.317 8 C 0.320 3.680 9 O -0.301 6.301 10 C 0.179 3.821 11 H 0.074 0.926 12 C -0.598 4.598 13 H 0.064 0.936 14 C 0.035 3.965 15 N -0.873 5.873 16 Si 1.076 2.924 17 H -0.282 1.282 18 H -0.278 1.278 19 H -0.283 1.283 20 C -0.029 4.029 21 Cl -0.207 7.207 22 C -0.247 4.247 23 H 0.058 0.942 24 H 0.074 0.926 25 H 0.057 0.943 26 H 0.051 0.949 27 H 0.068 0.932 28 H 0.072 0.928 29 H 0.157 0.843 30 H 0.279 0.721 31 H 0.096 0.904 32 H 0.080 0.920 33 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.551 11.689 -5.262 13.302 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 N -0.337 5.337 3 C -0.051 4.051 4 C 0.115 3.885 5 C -0.250 4.250 6 N -0.019 5.019 7 N -0.179 5.179 8 C 0.137 3.863 9 O -0.205 6.205 10 C 0.126 3.874 11 H 0.091 0.909 12 C -0.635 4.635 13 H 0.082 0.918 14 C -0.175 4.175 15 N -0.507 5.507 16 Si 0.902 3.098 17 H -0.208 1.208 18 H -0.204 1.204 19 H -0.209 1.209 20 C -0.092 4.092 21 Cl -0.180 7.180 22 C -0.282 4.282 23 H 0.077 0.923 24 H 0.093 0.907 25 H 0.076 0.924 26 H 0.069 0.931 27 H 0.087 0.913 28 H 0.090 0.910 29 H 0.175 0.825 30 H 0.091 0.909 31 H 0.115 0.885 32 H 0.099 0.901 33 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.732 10.321 -3.843 11.347 hybrid contribution -1.121 1.628 -1.677 2.592 sum -3.852 11.949 -5.520 13.715 Atomic orbital electron populations 1.21670 0.79064 1.02385 1.01890 1.46193 1.05298 1.02840 1.79353 1.21718 0.97470 0.84478 1.01400 1.18564 0.92038 0.86091 0.91761 1.23629 0.90357 0.99335 1.11665 1.72555 1.31530 0.94106 1.03701 1.73170 1.06726 1.17276 1.20735 1.21509 0.89988 0.88440 0.86348 1.86843 1.38772 1.10992 1.83916 1.20747 0.94043 0.82101 0.90538 0.90878 1.21882 1.38803 1.08235 0.94539 0.91790 1.26186 0.95161 1.01314 0.94836 1.70740 1.25235 1.14212 1.40475 0.83451 0.75677 0.74371 0.76287 1.20822 1.20352 1.20900 1.25095 0.96064 0.91365 0.96642 1.98682 1.76275 1.59576 1.83507 1.20781 1.01270 0.89315 1.16851 0.92332 0.90725 0.92448 0.93092 0.91280 0.90975 0.82548 0.90870 0.88515 0.90138 0.84276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.93 9.46 59.84 0.57 1.50 16 2 N -0.62 -7.74 3.40 -187.30 -0.64 -8.38 16 3 C 0.09 0.80 10.19 59.85 0.61 1.41 16 4 C 0.23 3.79 6.58 -83.54 -0.55 3.24 16 5 C -0.08 -1.33 10.50 -17.12 -0.18 -1.51 16 6 N -0.18 -3.72 11.48 30.71 0.35 -3.37 16 7 N -0.32 -7.46 7.57 30.46 0.23 -7.22 16 8 C 0.32 7.41 6.73 -17.02 -0.11 7.29 16 9 O -0.30 -7.64 9.75 -18.83 -0.18 -7.82 16 10 C 0.18 4.56 1.96 -27.88 -0.05 4.50 16 11 H 0.07 2.05 5.56 -51.93 -0.29 1.76 16 12 C -0.60 -16.14 8.69 -34.44 -0.30 -16.44 16 13 H 0.06 1.66 7.81 -52.49 -0.41 1.25 16 14 C 0.04 0.97 5.46 -17.82 -0.10 0.87 16 15 N -0.87 -25.84 13.62 55.43 0.75 -25.09 16 16 Si 1.08 23.78 29.91 -169.99 -5.08 18.69 16 17 H -0.28 -5.86 7.11 56.52 0.40 -5.46 16 18 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 19 H -0.28 -5.99 7.11 56.52 0.40 -5.58 16 20 C -0.03 -0.62 6.31 37.16 0.23 -0.39 16 21 Cl -0.21 -4.39 25.96 -51.86 -1.35 -5.73 16 22 C -0.25 -4.80 9.41 -38.87 -0.37 -5.17 16 23 H 0.06 0.61 8.02 -51.93 -0.42 0.20 16 24 H 0.07 0.52 7.79 -51.93 -0.40 0.12 16 25 H 0.06 0.58 8.02 -51.93 -0.42 0.16 16 26 H 0.05 0.40 8.14 -51.93 -0.42 -0.02 16 27 H 0.07 0.45 7.92 -51.93 -0.41 0.04 16 28 H 0.07 0.61 6.27 -51.93 -0.33 0.29 16 29 H 0.16 2.10 6.27 -52.49 -0.33 1.77 16 30 H 0.28 8.50 6.67 -40.82 -0.27 8.23 16 31 H 0.10 1.97 8.14 -51.93 -0.42 1.55 16 32 H 0.08 1.65 8.14 -51.93 -0.42 1.23 16 33 H 0.14 2.46 6.99 -52.49 -0.37 2.09 16 LS Contribution 294.02 15.07 4.43 4.43 Total: -1.00 -31.93 294.02 -5.44 -37.37 By element: Atomic # 1 Polarization: 5.51 SS G_CDS: -3.70 Total: 1.81 kcal Atomic # 6 Polarization: -4.44 SS G_CDS: -0.25 Total: -4.69 kcal Atomic # 7 Polarization: -44.76 SS G_CDS: 0.70 Total: -44.06 kcal Atomic # 8 Polarization: -7.64 SS G_CDS: -0.18 Total: -7.82 kcal Atomic # 14 Polarization: 23.78 SS G_CDS: -5.08 Total: 18.69 kcal Atomic # 17 Polarization: -4.39 SS G_CDS: -1.35 Total: -5.73 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -31.93 -5.44 -37.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001229219486.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.877 kcal (2) G-P(sol) polarization free energy of solvation -31.930 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.366 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds