Wall clock time and date at job start Mon Mar 30 2020 00:49:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36938 * 119.99950 * 2 1 4 4 H 1.07999 * 119.99895 * 202.14148 * 3 2 1 5 5 C 1.38813 * 120.00050 * 22.14447 * 3 2 1 6 6 N 1.31610 * 120.00203 * 11.27820 * 5 3 2 7 7 Si 1.86803 * 119.99518 * 191.27924 * 5 3 2 8 8 H 1.48496 * 109.47481 * 359.97438 * 7 5 3 9 9 H 1.48503 * 109.46871 * 120.00286 * 7 5 3 10 10 H 1.48503 * 109.46748 * 239.99523 * 7 5 3 11 11 C 1.46494 * 119.99936 * 179.97438 * 2 1 3 12 12 C 1.50704 * 109.47503 * 270.00637 * 11 2 1 13 13 C 1.38337 * 119.90343 * 260.00380 * 12 11 2 14 14 C 1.38283 * 120.40131 * 180.02562 * 13 12 11 15 15 C 1.38230 * 120.19412 * 359.97138 * 14 13 12 16 16 F 1.35099 * 120.10388 * 179.97438 * 15 14 13 17 17 C 1.39942 * 119.80052 * 0.02562 * 15 14 13 18 18 C 1.47411 * 120.19818 * 180.02562 * 17 15 14 19 19 O 1.21504 * 120.00160 * 89.99306 * 18 17 15 20 20 O 1.34750 * 119.99797 * 269.72768 * 18 17 15 21 21 C 1.38190 * 119.90230 * 80.27580 * 12 11 2 22 22 F 1.35097 * 120.10068 * 0.02562 * 21 12 11 23 23 H 1.08998 * 109.47418 * 274.50964 * 1 2 3 24 24 H 1.09002 * 109.46911 * 34.50534 * 1 2 3 25 25 H 1.08996 * 109.47118 * 154.49872 * 1 2 3 26 26 H 0.97001 * 120.00263 * 180.02562 * 6 5 3 27 27 H 1.09000 * 109.47411 * 150.00792 * 11 2 1 28 28 H 1.08998 * 109.47517 * 30.00427 * 11 2 1 29 29 H 1.08007 * 119.79653 * 0.02562 * 13 12 11 30 30 H 1.07997 * 119.90127 * 180.02562 * 14 13 12 31 31 H 0.96697 * 116.99707 * 180.27475 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 3.1700 1.2204 -0.3525 5 6 1.5324 2.3437 0.4531 6 7 0.3803 2.2712 1.0851 7 14 2.3372 4.0049 0.1659 8 1 3.6178 3.8154 -0.5617 9 1 1.4309 4.8610 -0.6409 10 1 2.6028 4.6587 1.4725 11 6 2.1975 -1.2687 0.0006 12 6 2.4486 -1.7033 1.4216 13 6 3.6844 -1.4816 2.0024 14 6 3.9261 -1.8766 3.3054 15 6 2.9326 -2.4968 4.0395 16 9 3.1710 -2.8825 5.3122 17 6 1.6794 -2.7251 3.4602 18 6 0.6133 -3.3853 4.2353 19 8 -0.1561 -2.7196 4.8995 20 8 0.4888 -4.7266 4.2029 21 6 1.4454 -2.3270 2.1387 22 9 0.2412 -2.5479 1.5676 23 1 -0.3634 0.0808 1.0244 24 1 -0.3633 0.8469 -0.5822 25 1 -0.3633 -0.9275 -0.4424 26 1 -0.0513 3.0803 1.4014 27 1 3.1500 -1.1386 -0.5132 28 1 1.6085 -2.0286 -0.5130 29 1 4.4651 -0.9971 1.4347 30 1 4.8938 -1.6992 3.7510 31 1 -0.2277 -5.1137 4.7241 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001249774470.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:49:27 Heat of formation + Delta-G solvation = -126.631633 kcal Electronic energy + Delta-G solvation = -20999.118991 eV Core-core repulsion = 17303.714395 eV Total energy + Delta-G solvation = -3695.404596 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -48.92966 -48.69814 -40.12290 -38.46774 -36.05783 -35.58782 -32.17837 -31.08430 -29.99875 -26.18732 -25.68821 -24.78458 -22.40967 -21.65923 -20.44412 -18.26840 -17.92907 -17.38028 -16.97943 -16.70127 -15.77630 -15.44776 -15.18212 -14.98203 -14.97826 -14.37104 -14.16808 -13.60967 -13.45791 -13.30377 -12.80635 -12.24089 -11.79094 -11.68968 -11.56600 -11.37065 -11.21774 -10.95561 -10.73238 -10.59909 -10.36816 -10.08265 -10.03343 -8.88709 -8.69095 -8.34268 -6.95414 -5.86626 -3.30688 0.96499 1.23944 2.05104 2.94532 3.30392 3.37011 3.39783 3.53482 3.95475 4.39211 4.61942 4.88671 4.97115 5.14344 5.29958 5.40639 5.54897 5.77833 5.83876 6.09816 6.19337 6.22140 6.36980 6.43186 6.67690 6.73274 6.94448 7.30862 7.64170 7.72397 7.80667 8.23081 9.06741 9.68173 10.16747 11.16699 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.022716 B = 0.006258 C = 0.005856 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1232.336413 B = 4473.141870 C = 4780.161470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.160 3.840 2 N -0.585 5.585 3 C -0.260 4.260 4 H 0.075 0.925 5 C 0.005 3.995 6 N -0.896 5.896 7 Si 0.909 3.091 8 H -0.276 1.276 9 H -0.288 1.288 10 H -0.289 1.289 11 C 0.180 3.820 12 C -0.122 4.122 13 C -0.035 4.035 14 C -0.159 4.159 15 C 0.137 3.863 16 F -0.133 7.133 17 C -0.185 4.185 18 C 0.541 3.459 19 O -0.490 6.490 20 O -0.506 6.506 21 C 0.175 3.825 22 F -0.121 7.121 23 H 0.031 0.969 24 H 0.049 0.951 25 H 0.003 0.997 26 H 0.256 0.744 27 H 0.067 0.933 28 H 0.056 0.944 29 H 0.146 0.854 30 H 0.144 0.856 31 H 0.411 0.589 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.041 -11.791 2.434 13.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 N -0.304 5.304 3 C -0.389 4.389 4 H 0.093 0.907 5 C -0.195 4.195 6 N -0.538 5.538 7 Si 0.738 3.262 8 H -0.201 1.201 9 H -0.214 1.214 10 H -0.216 1.216 11 C 0.052 3.948 12 C -0.128 4.128 13 C -0.055 4.055 14 C -0.178 4.178 15 C 0.116 3.884 16 F -0.112 7.112 17 C -0.188 4.188 18 C 0.382 3.618 19 O -0.376 6.376 20 O -0.317 6.317 21 C 0.154 3.846 22 F -0.099 7.099 23 H 0.049 0.951 24 H 0.067 0.933 25 H 0.021 0.979 26 H 0.066 0.934 27 H 0.085 0.915 28 H 0.075 0.925 29 H 0.163 0.837 30 H 0.162 0.838 31 H 0.270 0.730 Dipole moment (debyes) X Y Z Total from point charges 4.923 -11.249 2.411 12.514 hybrid contribution -0.437 0.727 0.822 1.181 sum 4.487 -10.522 3.233 11.886 Atomic orbital electron populations 1.20913 0.81732 0.96037 0.99734 1.44313 1.02328 1.00234 1.83503 1.19329 0.98473 0.84793 1.36316 0.90747 1.25159 0.97543 0.98952 0.97830 1.70094 1.17248 1.27481 1.39013 0.86129 0.78745 0.83790 0.77541 1.20074 1.21413 1.21553 1.20054 0.97639 0.89109 0.87989 1.21455 0.91942 0.96007 1.03379 1.20923 0.96302 0.94887 0.93353 1.21033 0.99231 1.02173 0.95390 1.17017 0.91974 0.99728 0.79648 1.91501 1.94645 1.89064 1.35971 1.18801 0.94240 1.10650 0.95138 1.20479 0.82647 0.80355 0.78303 1.90942 1.41975 1.65549 1.39114 1.84684 1.55770 1.22565 1.68719 1.17023 0.81796 0.97507 0.88285 1.91527 1.42025 1.92173 1.84174 0.95103 0.93255 0.97869 0.93378 0.91476 0.92543 0.83656 0.83830 0.73015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.94 8.18 59.85 0.49 4.43 16 2 N -0.58 -14.06 2.91 -182.50 -0.53 -14.59 16 3 C -0.26 -6.72 9.68 -15.06 -0.15 -6.86 16 4 H 0.07 1.83 7.84 -52.49 -0.41 1.41 16 5 C 0.01 0.14 5.13 -17.43 -0.09 0.05 16 6 N -0.90 -25.74 10.57 55.49 0.59 -25.16 16 7 Si 0.91 21.07 29.57 -169.99 -5.03 16.04 16 8 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 9 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 10 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 11 C 0.18 3.42 5.55 -5.19 -0.03 3.40 16 12 C -0.12 -2.22 5.46 -104.60 -0.57 -2.79 16 13 C -0.04 -0.54 9.65 -39.53 -0.38 -0.92 16 14 C -0.16 -2.30 10.01 -39.57 -0.40 -2.70 16 15 C 0.14 2.26 7.29 -38.95 -0.28 1.97 16 16 F -0.13 -2.13 16.83 2.25 0.04 -2.10 16 17 C -0.19 -3.36 5.76 -104.87 -0.60 -3.97 16 18 C 0.54 9.50 7.06 34.47 0.24 9.75 16 19 O -0.49 -10.00 17.89 -19.27 -0.34 -10.34 16 20 O -0.51 -6.68 13.44 -40.63 -0.55 -7.22 16 21 C 0.17 3.34 7.23 -38.95 -0.28 3.05 16 22 F -0.12 -2.40 15.33 2.25 0.03 -2.37 16 23 H 0.03 0.84 7.41 -51.93 -0.38 0.46 16 24 H 0.05 1.29 7.19 -51.93 -0.37 0.92 16 25 H 0.00 0.06 7.79 -51.93 -0.40 -0.34 16 26 H 0.26 7.15 8.31 -40.82 -0.34 6.81 16 27 H 0.07 1.14 7.89 -51.93 -0.41 0.73 16 28 H 0.06 1.00 7.65 -51.93 -0.40 0.60 16 29 H 0.15 1.91 8.03 -52.48 -0.42 1.49 16 30 H 0.14 1.60 8.06 -52.49 -0.42 1.18 16 31 H 0.41 3.21 9.11 45.56 0.42 3.63 16 LS Contribution 288.14 15.07 4.34 4.34 Total: -1.00 -32.15 288.14 -5.44 -37.59 By element: Atomic # 1 Polarization: 0.34 SS G_CDS: -1.94 Total: -1.60 kcal Atomic # 6 Polarization: 7.46 SS G_CDS: -2.05 Total: 5.41 kcal Atomic # 7 Polarization: -39.80 SS G_CDS: 0.06 Total: -39.75 kcal Atomic # 8 Polarization: -16.67 SS G_CDS: -0.89 Total: -17.56 kcal Atomic # 9 Polarization: -4.54 SS G_CDS: 0.07 Total: -4.47 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.03 Total: 16.04 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -32.15 -5.44 -37.59 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001249774470.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.044 kcal (2) G-P(sol) polarization free energy of solvation -32.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds