Wall clock time and date at job start Mon Mar 30 2020 01:29:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.36884 * 126.40072 * 2 1 4 4 Cl 1.73608 * 126.59654 * 359.97438 * 3 2 1 5 5 C 1.34793 * 106.80398 * 180.25419 * 3 2 1 6 6 N 1.34167 * 108.01335 * 359.73995 * 5 3 2 7 7 C 1.30475 * 109.26903 * 0.02562 * 6 5 3 8 8 C 1.50700 * 125.64096 * 179.97438 * 7 6 5 9 9 N 1.46908 * 109.46687 * 90.02616 * 8 7 6 10 10 C 1.47480 * 110.99907 * 74.02784 * 9 8 7 11 11 C 1.53515 * 87.93050 * 138.70117 * 10 9 8 12 12 O 1.42900 * 114.17193 * 87.61999 * 11 10 9 13 13 C 1.50696 * 114.17100 * 220.32968 * 11 10 9 14 14 H 1.08000 * 120.00309 * 93.83942 * 13 11 10 15 15 C 1.37883 * 120.00048 * 273.83883 * 13 11 10 16 16 N 1.31520 * 119.99659 * 0.02562 * 15 13 11 17 17 Si 1.86797 * 120.00362 * 179.97438 * 15 13 11 18 18 H 1.48505 * 109.46712 * 90.00131 * 17 15 13 19 19 H 1.48497 * 109.47210 * 210.00077 * 17 15 13 20 20 H 1.48500 * 109.47090 * 330.00249 * 17 15 13 21 21 C 1.47486 * 110.99674 * 169.99818 * 9 8 7 22 22 H 1.08993 * 109.47112 * 270.18688 * 1 2 3 23 23 H 1.08999 * 109.46580 * 30.19086 * 1 2 3 24 24 H 1.09002 * 109.46582 * 150.18342 * 1 2 3 25 25 H 1.08000 * 125.99472 * 179.77896 * 5 3 2 26 26 H 1.08993 * 109.47596 * 330.02420 * 8 7 6 27 27 H 1.08997 * 109.46971 * 210.01698 * 8 7 6 28 28 H 1.09004 * 113.47564 * 253.46110 * 10 9 8 29 29 H 1.08993 * 113.47671 * 23.93538 * 10 9 8 30 30 H 0.96700 * 114.00121 * 86.16271 * 12 11 10 31 31 H 0.96998 * 119.99675 * 180.02562 * 16 15 13 32 32 H 1.09000 * 113.47612 * 336.06529 * 21 9 8 33 33 H 1.09003 * 113.47275 * 106.52680 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2774 1.1018 0.0000 4 17 1.7697 2.7620 -0.0006 5 6 3.5472 0.6497 -0.0057 6 7 3.5102 -0.6915 -0.0033 7 6 2.2671 -1.0879 0.0031 8 6 1.8025 -2.5215 0.0071 9 7 1.6576 -2.9853 1.3935 10 6 0.4570 -2.4041 2.0224 11 6 0.1911 -3.7778 2.6542 12 8 0.8431 -3.9805 3.9096 13 6 -1.2603 -4.1831 2.6617 14 1 -1.6566 -4.7867 1.8586 15 6 -2.0824 -3.7832 3.6938 16 7 -1.6000 -3.0476 4.6716 17 14 -3.8817 -4.2849 3.7028 18 1 -4.0311 -5.5790 4.4158 19 1 -4.6827 -3.2433 4.3946 20 1 -4.3617 -4.4315 2.3052 21 6 0.9820 -4.2953 1.4445 22 1 -0.3633 0.0034 1.0276 23 1 -0.3632 0.8883 -0.5168 24 1 -0.3632 -0.8917 -0.5110 25 1 4.4382 1.2600 -0.0107 26 1 2.5348 -3.1422 -0.5091 27 1 0.8416 -2.5934 -0.5023 28 1 0.6823 -1.6268 2.7525 29 1 -0.3056 -2.1013 1.3050 30 1 0.3428 -3.6537 4.6699 31 1 -2.1783 -2.7667 5.3979 32 1 0.3595 -4.4971 0.5728 33 1 1.6524 -5.1205 1.6847 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001256565998.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:29:06 Heat of formation + Delta-G solvation = 51.411579 kcal Electronic energy + Delta-G solvation = -19027.169681 eV Core-core repulsion = 15923.575049 eV Total energy + Delta-G solvation = -3103.594631 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.10354 -39.21256 -36.78195 -34.55402 -33.99767 -32.15272 -30.98360 -27.98453 -27.02358 -25.75080 -25.01559 -22.71730 -21.41469 -19.71476 -18.73634 -17.53770 -17.08982 -16.10736 -15.23602 -15.19818 -14.82185 -14.40973 -14.13610 -13.91285 -13.53308 -13.05189 -12.76909 -12.61033 -12.13702 -11.95602 -11.84565 -11.53816 -11.49607 -11.19416 -10.90920 -10.81918 -10.43067 -10.12799 -9.91135 -9.58598 -9.42028 -8.75546 -8.38820 -8.12783 -8.01356 -6.36278 -4.47146 1.62039 1.89621 2.94289 3.11663 3.12467 3.20836 3.22141 4.16313 4.45021 4.69213 4.77415 4.88782 5.04438 5.13431 5.39698 5.46339 5.54215 5.73677 5.82630 5.91444 6.10619 6.15233 6.21977 6.54521 6.59798 6.88307 6.96791 7.08022 7.22557 7.66674 7.78454 7.89987 8.08761 8.55826 9.23791 9.61065 10.69561 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.023773 B = 0.005376 C = 0.004795 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1177.514438 B = 5207.372067 C = 5838.083491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.447 5.447 3 C 0.005 3.995 4 Cl -0.017 7.017 5 C 0.006 3.994 6 N -0.471 5.471 7 C 0.252 3.748 8 C 0.099 3.901 9 N -0.459 5.459 10 C -0.026 4.026 11 C 0.250 3.750 12 O -0.568 6.568 13 C -0.536 4.536 14 H 0.068 0.932 15 C 0.071 3.929 16 N -0.896 5.896 17 Si 0.904 3.096 18 H -0.276 1.276 19 H -0.284 1.284 20 H -0.272 1.272 21 C 0.004 3.996 22 H 0.090 0.910 23 H 0.085 0.915 24 H 0.093 0.907 25 H 0.177 0.823 26 H 0.103 0.897 27 H 0.053 0.947 28 H 0.066 0.934 29 H 0.058 0.942 30 H 0.390 0.610 31 H 0.272 0.728 32 H 0.067 0.933 33 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.915 7.677 -9.565 12.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.132 5.132 3 C -0.136 4.136 4 Cl 0.011 6.989 5 C -0.145 4.145 6 N -0.190 5.190 7 C -0.011 4.011 8 C -0.031 4.031 9 N -0.183 5.183 10 C -0.156 4.156 11 C 0.208 3.792 12 O -0.380 6.380 13 C -0.575 4.575 14 H 0.086 0.914 15 C -0.131 4.131 16 N -0.537 5.537 17 Si 0.731 3.269 18 H -0.202 1.202 19 H -0.210 1.210 20 H -0.197 1.197 21 C -0.125 4.125 22 H 0.109 0.891 23 H 0.104 0.896 24 H 0.112 0.888 25 H 0.195 0.805 26 H 0.121 0.879 27 H 0.071 0.929 28 H 0.085 0.915 29 H 0.076 0.924 30 H 0.246 0.754 31 H 0.083 0.917 32 H 0.085 0.915 33 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 3.462 7.250 -9.506 12.446 hybrid contribution -3.007 0.991 -0.058 3.167 sum 0.455 8.241 -9.563 12.632 Atomic orbital electron populations 1.22299 0.75988 1.04620 1.05019 1.45128 1.07968 1.05498 1.54593 1.21696 0.91300 0.82046 1.18552 1.98356 1.91863 1.11065 1.97634 1.22138 0.94238 0.91293 1.06828 1.70420 1.18456 1.10243 1.19877 1.23055 0.85257 0.90040 1.02743 1.21100 1.00352 0.86588 0.95032 1.69154 1.33531 1.05333 1.10239 1.24839 0.89374 1.02816 0.98523 1.19315 0.89358 0.88426 0.82058 1.86050 1.50294 1.84549 1.17153 1.21566 0.93562 1.33823 1.08508 0.91431 1.25077 0.99543 0.93577 0.94885 1.69303 1.36938 1.36067 1.11388 0.86402 0.83522 0.78567 0.78414 1.20187 1.20955 1.19708 1.24129 0.96331 0.92791 0.99203 0.89121 0.89638 0.88827 0.80539 0.87896 0.92869 0.91530 0.92367 0.75377 0.91721 0.91493 0.90445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.79 9.20 59.85 0.55 1.35 16 2 N -0.45 -6.87 3.16 -117.76 -0.37 -7.24 16 3 C 0.00 0.07 7.49 -16.52 -0.12 -0.06 16 4 Cl -0.02 -0.21 28.94 -51.86 -1.50 -1.71 16 5 C 0.01 0.09 11.86 -17.75 -0.21 -0.12 16 6 N -0.47 -8.52 11.25 -10.76 -0.12 -8.64 16 7 C 0.25 4.34 7.05 -155.33 -1.10 3.24 16 8 C 0.10 1.66 5.14 -4.97 -0.03 1.63 16 9 N -0.46 -9.39 6.40 -246.05 -1.58 -10.97 16 10 C -0.03 -0.57 5.87 -7.54 -0.04 -0.62 16 11 C 0.25 6.08 1.57 -91.24 -0.14 5.94 16 12 O -0.57 -15.22 13.54 -35.23 -0.48 -15.70 16 13 C -0.54 -13.53 8.69 -34.44 -0.30 -13.83 16 14 H 0.07 1.65 7.81 -52.49 -0.41 1.24 16 15 C 0.07 1.80 5.40 -17.81 -0.10 1.70 16 16 N -0.90 -23.24 11.02 55.43 0.61 -22.63 16 17 Si 0.90 19.44 29.54 -169.99 -5.02 14.42 16 18 H -0.28 -5.98 7.11 56.52 0.40 -5.58 16 19 H -0.28 -6.09 7.11 56.52 0.40 -5.68 16 20 H -0.27 -5.74 7.11 56.52 0.40 -5.34 16 21 C 0.00 0.08 7.12 -7.54 -0.05 0.03 16 22 H 0.09 1.25 7.36 -51.93 -0.38 0.87 16 23 H 0.08 0.88 7.93 -51.93 -0.41 0.47 16 24 H 0.09 1.08 6.69 -51.93 -0.35 0.73 16 25 H 0.18 2.19 8.06 -52.49 -0.42 1.76 16 26 H 0.10 1.60 8.14 -51.93 -0.42 1.18 16 27 H 0.05 0.79 6.48 -51.93 -0.34 0.45 16 28 H 0.07 1.60 8.14 -51.93 -0.42 1.18 16 29 H 0.06 1.16 5.60 -51.93 -0.29 0.87 16 30 H 0.39 10.63 6.34 45.56 0.29 10.92 16 31 H 0.27 6.71 8.31 -40.82 -0.34 6.37 16 32 H 0.07 1.24 7.72 -51.93 -0.40 0.84 16 33 H 0.08 1.60 8.14 -51.93 -0.42 1.18 16 LS Contribution 291.27 15.07 4.39 4.39 Total: -1.00 -28.62 291.27 -8.72 -37.35 By element: Atomic # 1 Polarization: 14.58 SS G_CDS: -3.12 Total: 11.46 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -1.54 Total: -0.73 kcal Atomic # 7 Polarization: -48.02 SS G_CDS: -1.46 Total: -49.47 kcal Atomic # 8 Polarization: -15.22 SS G_CDS: -0.48 Total: -15.70 kcal Atomic # 14 Polarization: 19.44 SS G_CDS: -5.02 Total: 14.42 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.50 Total: -1.71 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -28.62 -8.72 -37.35 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001256565998.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.759 kcal (2) G-P(sol) polarization free energy of solvation -28.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.724 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.347 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds