Wall clock time and date at job start Mon Mar 30 2020 00:58:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46493 * 109.46900 * 254.99920 * 3 2 1 5 5 C 1.36975 * 120.00237 * 264.97118 * 4 3 2 6 6 H 1.07999 * 120.00094 * 197.08459 * 5 4 3 7 7 C 1.38946 * 119.99952 * 17.08669 * 5 4 3 8 8 N 1.31440 * 119.99553 * 14.09931 * 7 5 4 9 9 Si 1.86797 * 120.00362 * 194.09400 * 7 5 4 10 10 H 1.48502 * 109.46814 * 90.00104 * 9 7 5 11 11 H 1.48495 * 109.47646 * 210.00017 * 9 7 5 12 12 H 1.48495 * 109.47126 * 330.00389 * 9 7 5 13 13 C 1.34783 * 119.99899 * 84.97480 * 4 3 2 14 14 O 1.21746 * 120.00103 * 4.12642 * 13 4 3 15 15 C 1.46495 * 119.99826 * 184.12843 * 13 4 3 16 16 C 1.40698 * 126.55096 * 310.96491 * 15 13 4 17 17 N 1.30685 * 108.72803 * 180.02562 * 16 15 13 18 18 N 1.39901 * 109.54292 * 359.97438 * 17 16 15 19 19 C 1.36329 * 132.15545 * 180.34556 * 18 17 16 20 20 C 1.35763 * 119.14786 * 180.16562 * 19 18 17 21 21 C 1.39963 * 119.35735 * 359.46148 * 20 19 18 22 22 N 1.31518 * 120.10391 * 0.27037 * 21 20 19 23 23 C 1.33344 * 120.85775 * 0.02562 * 22 21 20 24 24 H 1.09000 * 109.46731 * 135.00074 * 3 2 1 25 25 H 1.08997 * 109.46872 * 14.99719 * 3 2 1 26 26 H 0.97008 * 119.99419 * 179.97438 * 8 7 5 27 27 H 1.08006 * 125.63470 * 0.02562 * 16 15 13 28 28 H 1.07994 * 120.42577 * 359.92795 * 19 18 17 29 29 H 1.08000 * 120.32414 * 179.73298 * 20 19 18 30 30 H 1.07998 * 119.94837 * 180.30428 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0962 0.3584 1.3341 5 6 3.4219 1.6581 1.6185 6 1 4.0296 1.8860 2.4817 7 6 2.9705 2.6833 0.7965 8 7 2.0179 2.4522 -0.0792 9 14 3.7171 4.3898 0.9359 10 1 4.8778 4.4989 0.0161 11 1 2.6989 5.4071 0.5707 12 1 4.1684 4.6201 2.3318 13 6 3.2248 -0.5915 2.2817 14 8 3.0075 -1.7577 2.0081 15 6 3.6260 -0.2205 3.6409 16 6 4.7109 0.6005 3.9997 17 7 4.7492 0.6997 5.3022 18 7 3.7024 -0.0427 5.8591 19 6 3.3141 -0.2516 7.1491 20 6 2.2367 -1.0399 7.3960 21 6 1.5433 -1.6102 6.3222 22 7 1.9386 -1.3861 5.0880 23 6 2.9995 -0.6176 4.8386 24 1 2.9710 0.7275 -0.7267 25 1 2.9718 -0.9918 -0.2659 26 1 1.7024 3.1681 -0.6528 27 1 5.3983 1.0710 3.3122 28 1 3.8588 0.2011 7.9644 29 1 1.9151 -1.2217 8.4108 30 1 0.6820 -2.2349 6.5074 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001318098866.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:58:28 Heat of formation + Delta-G solvation = 139.251709 kcal Electronic energy + Delta-G solvation = -20048.291484 eV Core-core repulsion = 16847.398393 eV Total energy + Delta-G solvation = -3200.893091 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -42.07999 -38.74070 -37.59957 -35.45981 -34.32693 -33.75786 -31.61456 -30.94190 -29.43006 -27.28273 -24.97380 -24.65949 -23.23791 -21.81540 -19.54169 -18.39984 -17.67286 -17.02272 -16.65511 -15.96193 -15.81697 -15.39681 -14.49447 -14.42584 -14.08568 -13.59960 -13.11414 -13.04110 -12.72345 -12.51003 -12.41175 -11.85421 -11.46150 -11.26632 -11.21234 -11.11898 -10.94849 -10.50852 -10.44578 -10.18952 -9.59695 -9.36182 -9.29220 -8.72202 -8.08769 -7.50208 -6.51293 -4.07410 0.65773 1.02146 2.22982 2.72011 3.07137 3.15761 3.18421 3.48671 3.65951 4.02295 4.07800 4.17685 4.29997 4.33575 4.46322 4.89619 4.94640 5.04786 5.23579 5.43544 5.56450 5.58507 5.78443 6.10116 6.22729 6.50326 6.58197 6.75030 6.84432 7.27129 7.50630 7.64471 7.88550 8.20423 8.92637 9.01757 9.30274 9.71451 10.51968 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.018508 B = 0.007425 C = 0.006025 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1512.500631 B = 3770.197694 C = 4646.335830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.488 5.488 2 C 0.261 3.739 3 C 0.233 3.767 4 N -0.436 5.436 5 C -0.336 4.336 6 H 0.108 0.892 7 C 0.036 3.964 8 N -0.873 5.873 9 Si 0.926 3.074 10 H -0.273 1.273 11 H -0.284 1.284 12 H -0.269 1.269 13 C 0.544 3.456 14 O -0.584 6.584 15 C -0.217 4.217 16 C 0.128 3.872 17 N -0.321 5.321 18 N -0.313 5.313 19 C 0.162 3.838 20 C -0.233 4.233 21 C 0.166 3.834 22 N -0.440 5.440 23 C 0.283 3.717 24 H 0.133 0.867 25 H 0.087 0.913 26 H 0.275 0.725 27 H 0.210 0.790 28 H 0.176 0.824 29 H 0.164 0.836 30 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.152 -1.997 11.654 12.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.169 5.169 2 C -0.057 4.057 3 C 0.106 3.894 4 N -0.156 5.156 5 C -0.463 4.463 6 H 0.126 0.874 7 C -0.169 4.169 8 N -0.512 5.512 9 Si 0.752 3.248 10 H -0.198 1.198 11 H -0.209 1.209 12 H -0.194 1.194 13 C 0.333 3.667 14 O -0.468 6.468 15 C -0.232 4.232 16 C -0.051 4.051 17 N -0.145 5.145 18 N -0.083 5.083 19 C 0.026 3.974 20 C -0.257 4.257 21 C -0.018 4.018 22 N -0.150 5.150 23 C 0.055 3.945 24 H 0.150 0.850 25 H 0.105 0.895 26 H 0.086 0.914 27 H 0.226 0.774 28 H 0.193 0.807 29 H 0.181 0.819 30 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 3.663 -2.152 11.367 12.135 hybrid contribution 0.539 1.264 0.258 1.398 sum 4.202 -0.888 11.624 12.392 Atomic orbital electron populations 1.80836 1.13816 1.13359 1.08854 1.29255 0.95343 0.89036 0.92099 1.18641 0.81428 1.01550 0.87764 1.43452 1.56311 1.07673 1.08134 1.19897 1.31824 0.81041 1.13558 0.87446 1.25299 0.94919 1.00104 0.96558 1.69859 1.24251 1.34318 1.22730 0.85922 0.78736 0.81144 0.78978 1.19847 1.20945 1.19384 1.16727 0.81985 0.85203 0.82809 1.90698 1.56231 1.18686 1.81228 1.19490 1.01731 1.09428 0.92579 1.24243 0.96182 0.93012 0.91681 1.77474 1.07030 1.19515 1.10440 1.46901 1.21884 1.33551 1.06010 1.21969 0.95252 0.95379 0.84776 1.21756 0.98175 1.03244 1.02553 1.23410 0.97446 0.94223 0.86752 1.68169 1.10847 1.13182 1.22783 1.20272 0.90837 0.94535 0.88882 0.84975 0.89527 0.91427 0.77400 0.80666 0.81887 0.80647 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -13.08 18.54 42.16 0.78 -12.30 16 2 C 0.26 6.60 13.67 -20.76 -0.28 6.32 16 3 C 0.23 5.29 5.11 -6.83 -0.03 5.25 16 4 N -0.44 -10.49 2.60 -119.48 -0.31 -10.80 16 5 C -0.34 -7.90 9.06 -14.99 -0.14 -8.03 16 6 H 0.11 2.35 4.24 -52.49 -0.22 2.13 16 7 C 0.04 0.84 5.07 -17.46 -0.09 0.76 16 8 N -0.87 -21.75 9.01 55.50 0.50 -21.25 16 9 Si 0.93 18.51 29.58 -169.99 -5.03 13.48 16 10 H -0.27 -5.28 7.11 56.52 0.40 -4.88 16 11 H -0.28 -5.90 7.11 56.52 0.40 -5.50 16 12 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 13 C 0.54 13.36 7.44 -12.93 -0.10 13.27 16 14 O -0.58 -15.67 16.75 5.15 0.09 -15.58 16 15 C -0.22 -4.75 5.35 -104.64 -0.56 -5.31 16 16 C 0.13 2.38 9.80 -17.11 -0.17 2.22 16 17 N -0.32 -5.71 12.57 30.78 0.39 -5.33 16 18 N -0.31 -5.32 3.86 -11.95 -0.05 -5.37 16 19 C 0.16 1.88 11.29 -16.44 -0.19 1.70 16 20 C -0.23 -2.22 10.05 -39.82 -0.40 -2.62 16 21 C 0.17 2.12 11.28 -17.04 -0.19 1.93 16 22 N -0.44 -8.44 10.47 -11.98 -0.13 -8.57 16 23 C 0.28 5.78 7.90 -155.82 -1.23 4.55 16 24 H 0.13 2.90 6.22 -51.93 -0.32 2.58 16 25 H 0.09 1.79 7.52 -51.93 -0.39 1.40 16 26 H 0.27 6.64 8.31 -40.82 -0.34 6.30 16 27 H 0.21 3.29 7.12 -52.48 -0.37 2.91 16 28 H 0.18 1.32 8.06 -52.49 -0.42 0.89 16 29 H 0.16 0.77 8.06 -52.49 -0.42 0.35 16 30 H 0.18 1.52 8.06 -52.49 -0.42 1.09 16 LS Contribution 278.31 15.07 4.19 4.19 Total: -1.00 -34.51 278.31 -4.65 -39.16 By element: Atomic # 1 Polarization: 4.07 SS G_CDS: -1.71 Total: 2.36 kcal Atomic # 6 Polarization: 23.39 SS G_CDS: -3.38 Total: 20.01 kcal Atomic # 7 Polarization: -64.80 SS G_CDS: 1.19 Total: -63.62 kcal Atomic # 8 Polarization: -15.67 SS G_CDS: 0.09 Total: -15.58 kcal Atomic # 14 Polarization: 18.51 SS G_CDS: -5.03 Total: 13.48 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -34.51 -4.65 -39.16 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001318098866.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.408 kcal (2) G-P(sol) polarization free energy of solvation -34.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 143.901 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.156 kcal (6) G-S(sol) free energy of system = (1) + (5) 139.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds