Wall clock time and date at job start Mon Mar 30 2020 01:27:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34947 * 126.02221 * 2 1 4 4 C 1.35304 * 107.76423 * 179.97438 * 3 2 1 5 5 C 1.50704 * 126.04823 * 179.97438 * 4 3 2 6 6 N 1.46897 * 109.47145 * 102.42500 * 5 4 3 7 7 C 1.47956 * 111.00057 * 294.21523 * 6 5 4 8 8 C 1.53934 * 86.18087 * 222.42056 * 7 6 5 9 9 O 1.42901 * 113.73220 * 269.25577 * 8 7 6 10 10 C 1.50706 * 113.73683 * 138.08137 * 8 7 6 11 11 H 1.07998 * 119.99692 * 3.79691 * 10 8 7 12 12 C 1.37868 * 120.00146 * 183.79834 * 10 8 7 13 13 N 1.31517 * 120.00102 * 186.96373 * 12 10 8 14 14 Si 1.86798 * 120.00174 * 6.96023 * 12 10 8 15 15 H 1.48500 * 109.47375 * 270.00409 * 14 12 10 16 16 H 1.48497 * 109.47102 * 30.00101 * 14 12 10 17 17 H 1.48499 * 109.47356 * 149.99814 * 14 12 10 18 18 C 1.47960 * 110.99569 * 194.85644 * 6 5 4 19 19 C 1.39975 * 107.90910 * 0.24193 * 4 3 2 20 20 Cl 1.73597 * 125.91379 * 179.75947 * 19 4 3 21 21 N 1.30896 * 108.17124 * 359.59106 * 19 4 3 22 22 H 1.09006 * 109.47166 * 90.00334 * 1 2 3 23 23 H 1.09004 * 109.46890 * 209.99465 * 1 2 3 24 24 H 1.08999 * 109.47642 * 329.99629 * 1 2 3 25 25 H 1.07999 * 126.11976 * 359.94276 * 3 2 1 26 26 H 1.09002 * 109.46381 * 342.42527 * 5 4 3 27 27 H 1.08998 * 109.47072 * 222.42996 * 5 4 3 28 28 H 1.09003 * 113.75909 * 108.10148 * 7 6 5 29 29 H 1.08998 * 113.86178 * 336.74679 * 7 6 5 30 30 H 0.96703 * 114.00271 * 170.54111 * 9 8 7 31 31 H 0.97003 * 119.99775 * 354.90780 * 13 12 10 32 32 H 1.08992 * 113.76344 * 23.26714 * 18 6 5 33 33 H 1.09005 * 113.76216 * 251.89848 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2586 1.0914 0.0000 4 6 3.5435 0.6675 0.0006 5 6 4.7675 1.5468 0.0002 6 7 5.3387 1.5914 1.3529 7 6 4.4169 2.2623 2.2959 8 6 5.6661 2.9671 2.8547 9 8 6.2899 2.2640 3.9312 10 6 5.4556 4.4294 3.1522 11 1 4.4778 4.8705 3.0272 12 6 6.5113 5.2041 3.5838 13 7 6.3019 6.4425 3.9740 14 14 8.2391 4.4947 3.6145 15 1 8.4899 3.8589 4.9328 16 1 8.3760 3.4782 2.5407 17 1 9.2250 5.5831 3.3942 18 6 6.3096 2.7004 1.4820 19 6 3.5350 -0.7322 -0.0047 20 17 4.9348 -1.7590 -0.0121 21 7 2.2889 -1.1328 0.0006 22 1 -0.3634 -0.0001 -1.0277 23 1 -0.3633 -0.8901 0.5138 24 1 -0.3634 0.8899 0.5139 25 1 1.9274 2.1194 -0.0009 26 1 4.4909 2.5542 -0.3108 27 1 5.5052 1.1423 -0.6927 28 1 3.9421 1.5831 3.0040 29 1 3.7095 2.9382 1.8154 30 1 7.1499 2.6230 4.1895 31 1 5.4189 6.8350 3.8889 32 1 6.1567 3.5041 0.7618 33 1 7.3472 2.3713 1.5398 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001347939962.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:57 Heat of formation + Delta-G solvation = 76.264049 kcal Electronic energy + Delta-G solvation = -18809.479330 eV Core-core repulsion = 15706.962383 eV Total energy + Delta-G solvation = -3102.516947 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.33556 -39.16926 -36.58186 -34.92761 -33.23770 -32.47020 -31.28161 -28.57552 -26.71048 -25.45930 -24.83473 -22.01188 -21.27514 -20.21409 -18.97258 -17.85215 -16.91110 -15.80890 -15.67955 -15.11728 -15.04923 -14.59045 -14.16354 -13.77031 -13.25973 -13.23942 -13.11759 -12.84999 -12.15609 -11.96443 -11.70584 -11.57657 -11.43950 -11.15228 -10.80197 -10.57533 -10.38877 -10.15765 -9.59703 -9.27898 -9.26322 -8.86704 -8.61858 -8.22539 -7.95922 -6.57790 -4.33394 1.56980 1.70165 2.56311 2.86059 3.22351 3.29282 3.42874 4.29646 4.40959 4.69126 4.79165 4.91098 4.96659 5.15946 5.18147 5.29760 5.52401 5.64321 5.75130 5.88421 5.95835 6.12772 6.23605 6.28679 6.52109 6.65763 6.82376 6.95893 7.04738 7.42615 7.72413 7.82226 8.16495 8.64712 8.79238 9.41137 10.76072 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.026972 B = 0.005469 C = 0.004825 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1037.881106 B = 5118.927373 C = 5801.118146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.105 3.895 2 N -0.368 5.368 3 C 0.068 3.932 4 C -0.205 4.205 5 C 0.094 3.906 6 N -0.467 5.467 7 C 0.031 3.969 8 C 0.202 3.798 9 O -0.553 6.553 10 C -0.609 4.609 11 H 0.064 0.936 12 C 0.033 3.967 13 N -0.899 5.899 14 Si 1.032 2.968 15 H -0.278 1.278 16 H -0.262 1.262 17 H -0.284 1.284 18 C -0.034 4.034 19 C 0.143 3.857 20 Cl 0.010 6.990 21 N -0.290 5.290 22 H 0.075 0.925 23 H 0.090 0.910 24 H 0.091 0.909 25 H 0.180 0.820 26 H 0.046 0.954 27 H 0.079 0.921 28 H 0.072 0.928 29 H 0.065 0.935 30 H 0.350 0.650 31 H 0.270 0.730 32 H 0.070 0.930 33 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.791 -10.528 -10.145 16.567 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.036 4.036 2 N -0.151 5.151 3 C -0.078 4.078 4 C -0.217 4.217 5 C -0.036 4.036 6 N -0.190 5.190 7 C -0.098 4.098 8 C 0.161 3.839 9 O -0.361 6.361 10 C -0.647 4.647 11 H 0.082 0.918 12 C -0.173 4.173 13 N -0.532 5.532 14 Si 0.860 3.140 15 H -0.205 1.205 16 H -0.187 1.187 17 H -0.210 1.210 18 C -0.163 4.163 19 C -0.049 4.049 20 Cl 0.038 6.962 21 N -0.116 5.116 22 H 0.094 0.906 23 H 0.108 0.892 24 H 0.109 0.891 25 H 0.197 0.803 26 H 0.064 0.936 27 H 0.097 0.903 28 H 0.091 0.909 29 H 0.083 0.917 30 H 0.200 0.800 31 H 0.080 0.920 32 H 0.088 0.912 33 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -7.393 -12.304 -9.663 17.304 hybrid contribution -0.967 1.506 -0.682 1.915 sum -8.361 -10.798 -10.345 17.132 Atomic orbital electron populations 1.21900 0.73513 1.04814 1.03419 1.48164 1.06427 1.03114 1.57442 1.22383 0.90071 0.93641 1.01713 1.19834 0.94965 0.92029 1.14871 1.20922 0.92217 0.96049 0.94387 1.68684 1.08866 1.37401 1.04029 1.23820 0.95662 0.95568 0.94711 1.20417 0.89545 0.91135 0.82786 1.86454 1.36398 1.59126 1.54170 1.22388 0.98427 0.92850 1.51077 0.91790 1.25810 1.04173 0.95345 0.91997 1.70796 1.26358 1.14854 1.41237 0.84310 0.75687 0.76294 0.77679 1.20483 1.18717 1.21005 1.25148 0.97619 0.91946 1.01585 1.22490 0.88878 0.90902 1.02586 1.98384 1.34167 1.66880 1.96809 1.77300 1.00084 1.08189 1.26013 0.90630 0.89153 0.89076 0.80294 0.93551 0.90258 0.90946 0.91683 0.80033 0.91973 0.91160 0.90339 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.77 11.47 59.85 0.69 1.46 16 2 N -0.37 -4.63 4.01 -68.16 -0.27 -4.91 16 3 C 0.07 0.88 11.38 -17.23 -0.20 0.69 16 4 C -0.20 -3.17 4.96 -105.02 -0.52 -3.69 16 5 C 0.09 1.53 5.25 -4.98 -0.03 1.50 16 6 N -0.47 -9.21 6.29 -239.71 -1.51 -10.72 16 7 C 0.03 0.66 6.69 -2.77 -0.02 0.64 16 8 C 0.20 4.85 1.06 -90.84 -0.10 4.75 16 9 O -0.55 -13.75 13.41 -35.23 -0.47 -14.23 16 10 C -0.61 -16.56 9.03 -34.44 -0.31 -16.87 16 11 H 0.06 1.85 8.05 -52.49 -0.42 1.42 16 12 C 0.03 0.92 5.47 -17.82 -0.10 0.82 16 13 N -0.90 -26.59 13.70 55.43 0.76 -25.83 16 14 Si 1.03 23.46 24.85 -169.99 -4.22 19.24 16 15 H -0.28 -6.02 6.92 56.52 0.39 -5.63 16 16 H -0.26 -5.39 4.79 56.52 0.27 -5.12 16 17 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 18 C -0.03 -0.72 6.08 -2.77 -0.02 -0.74 16 19 C 0.14 2.31 7.84 -17.30 -0.14 2.17 16 20 Cl 0.01 0.15 29.16 -51.86 -1.51 -1.36 16 21 N -0.29 -4.53 12.58 32.94 0.41 -4.11 16 22 H 0.08 0.43 8.14 -51.93 -0.42 0.01 16 23 H 0.09 0.62 8.14 -51.93 -0.42 0.20 16 24 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 25 H 0.18 1.78 8.06 -52.49 -0.42 1.36 16 26 H 0.05 0.72 7.68 -51.93 -0.40 0.32 16 27 H 0.08 1.23 8.14 -51.93 -0.42 0.81 16 28 H 0.07 1.58 8.14 -51.93 -0.42 1.16 16 29 H 0.07 1.29 7.81 -51.93 -0.41 0.89 16 30 H 0.35 8.11 4.37 45.56 0.20 8.31 16 31 H 0.27 7.94 8.72 -40.82 -0.36 7.58 16 32 H 0.07 1.45 7.66 -51.93 -0.40 1.05 16 33 H 0.08 1.64 6.50 -51.93 -0.34 1.30 16 LS Contribution 291.59 15.07 4.39 4.39 Total: -1.00 -32.43 291.59 -6.75 -39.18 By element: Atomic # 1 Polarization: 11.21 SS G_CDS: -3.59 Total: 7.62 kcal Atomic # 6 Polarization: -8.54 SS G_CDS: -0.73 Total: -9.27 kcal Atomic # 7 Polarization: -44.96 SS G_CDS: -0.61 Total: -45.57 kcal Atomic # 8 Polarization: -13.75 SS G_CDS: -0.47 Total: -14.23 kcal Atomic # 14 Polarization: 23.46 SS G_CDS: -4.22 Total: 19.24 kcal Atomic # 17 Polarization: 0.15 SS G_CDS: -1.51 Total: -1.36 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -32.43 -6.75 -39.18 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001347939962.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.444 kcal (2) G-P(sol) polarization free energy of solvation -32.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.011 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.180 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds