Wall clock time and date at job start Mon Mar 30 2020 01:20:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08999 * 109.47020 * 2 1 4 4 C 1.50704 * 109.47055 * 119.99630 * 2 1 3 5 5 H 1.07999 * 119.99724 * 119.99829 * 4 2 1 6 6 C 1.37876 * 119.99886 * 300.00486 * 4 2 1 7 7 N 1.31509 * 120.00172 * 0.02562 * 6 4 2 8 8 Si 1.86804 * 119.99831 * 179.97438 * 6 4 2 9 9 H 1.48496 * 109.46840 * 89.99821 * 8 6 4 10 10 H 1.48495 * 109.47335 * 209.99867 * 8 6 4 11 11 H 1.48498 * 109.47272 * 330.00005 * 8 6 4 12 12 N 1.46494 * 109.47149 * 239.99797 * 2 1 3 13 13 C 1.46505 * 120.00234 * 299.99619 * 12 2 1 14 14 C 1.34783 * 119.99891 * 120.00326 * 12 2 1 15 15 O 1.21570 * 119.99992 * 4.14349 * 14 12 2 16 16 C 1.47713 * 119.99802 * 184.14479 * 14 12 2 17 17 C 1.41503 * 126.50968 * 184.41132 * 16 14 12 18 18 C 1.35511 * 105.48288 * 179.84762 * 17 16 14 19 19 Cl 1.73602 * 126.40036 * 180.12322 * 18 17 16 20 20 N 1.35062 * 107.19627 * 0.41101 * 18 17 16 21 21 C 1.46501 * 124.88624 * 179.72287 * 20 18 17 22 22 N 1.28462 * 110.23604 * 359.73029 * 20 18 17 23 23 H 1.08999 * 109.47433 * 300.00333 * 1 2 3 24 24 H 1.08996 * 109.47047 * 60.00293 * 1 2 3 25 25 H 1.08999 * 109.47020 * 180.02562 * 1 2 3 26 26 H 0.97005 * 120.00070 * 180.02562 * 7 6 4 27 27 H 1.08995 * 109.47244 * 264.22035 * 13 12 2 28 28 H 1.09005 * 109.46516 * 144.22299 * 13 12 2 29 29 H 1.09001 * 109.46824 * 24.22689 * 13 12 2 30 30 H 1.08005 * 127.25423 * 359.96820 * 17 16 14 31 31 H 1.08997 * 109.47479 * 270.03572 * 21 20 18 32 32 H 1.09010 * 109.46719 * 30.03194 * 21 20 18 33 33 H 1.08999 * 109.47201 * 150.02725 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7103 1.2305 5 1 2.6532 -1.5885 1.1315 6 6 1.6991 -0.2393 2.4828 7 7 0.9426 0.8297 2.6034 8 14 2.3212 -1.1202 4.0081 9 1 3.6295 -0.5457 4.4124 10 1 1.3430 -0.9491 5.1121 11 1 2.4858 -2.5660 3.7121 12 7 2.0183 -0.6906 -1.1961 13 6 1.6645 -2.0933 -1.4279 14 6 2.7933 -0.0356 -2.0833 15 8 3.1493 1.1040 -1.8544 16 6 3.2100 -0.7026 -3.3337 17 6 4.0872 -0.1812 -4.3140 18 6 4.1732 -1.1391 -5.2686 19 17 5.1153 -1.0607 -6.7247 20 7 3.3841 -2.1635 -4.8786 21 6 3.1872 -3.4038 -5.6331 22 7 2.8309 -1.8939 -3.7510 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 0.7085 1.1613 3.4844 27 1 2.4658 -2.7353 -1.0623 28 1 1.5234 -2.2606 -2.4957 29 1 0.7410 -2.3273 -0.8983 30 1 4.5849 0.7773 -4.3026 31 1 2.3433 -3.2857 -6.3126 32 1 4.0870 -3.6269 -6.2066 33 1 2.9852 -4.2216 -4.9414 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001355146530.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:20:54 Heat of formation + Delta-G solvation = 56.086518 kcal Electronic energy + Delta-G solvation = -18702.811307 eV Core-core repulsion = 15599.419396 eV Total energy + Delta-G solvation = -3103.391911 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.68989 -38.72611 -37.06843 -35.30012 -33.65953 -32.71142 -30.61642 -29.36946 -27.35613 -26.01972 -25.16032 -23.25925 -21.48447 -20.62722 -18.81817 -17.28312 -16.59750 -16.45740 -16.08575 -15.23797 -14.38509 -14.29275 -14.16279 -14.02011 -13.18819 -12.98153 -12.77879 -12.56363 -12.37692 -12.20366 -11.94575 -11.55791 -11.40957 -11.01162 -10.79281 -10.71503 -10.23357 -10.19187 -10.10326 -9.22538 -9.13463 -9.08276 -9.02828 -8.38479 -7.51466 -6.02428 -4.09810 1.35383 1.59440 2.08007 2.45868 3.31229 3.37393 3.39732 3.92663 3.98978 4.26517 4.44782 4.79692 4.92540 5.07936 5.13432 5.28773 5.45237 5.65844 6.05430 6.21000 6.29629 6.42259 6.65354 6.83407 6.91078 7.10103 7.48979 7.55419 7.76271 7.81567 8.06504 8.23980 8.56388 8.87090 9.06221 9.56231 11.02993 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.035042 B = 0.004360 C = 0.004268 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 798.841837 B = 6420.717511 C = 6558.162536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.257 3.743 3 H 0.065 0.935 4 C -0.523 4.523 5 H 0.059 0.941 6 C 0.064 3.936 7 N -0.889 5.889 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.286 1.286 11 H -0.275 1.275 12 N -0.575 5.575 13 C 0.078 3.922 14 C 0.584 3.416 15 O -0.541 6.541 16 C 0.014 3.986 17 C -0.154 4.154 18 C 0.045 3.955 19 Cl -0.007 7.007 20 N -0.285 5.285 21 C 0.083 3.917 22 N -0.239 5.239 23 H 0.095 0.905 24 H 0.012 0.988 25 H 0.031 0.969 26 H 0.263 0.737 27 H 0.043 0.957 28 H 0.085 0.915 29 H 0.070 0.930 30 H 0.171 0.829 31 H 0.087 0.913 32 H 0.093 0.907 33 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.947 -8.737 -17.813 20.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.157 3.843 3 H 0.083 0.917 4 C -0.561 4.561 5 H 0.078 0.922 6 C -0.138 4.138 7 N -0.527 5.527 8 Si 0.727 3.273 9 H -0.206 1.206 10 H -0.212 1.212 11 H -0.200 1.200 12 N -0.305 5.305 13 C -0.066 4.066 14 C 0.368 3.632 15 O -0.418 6.418 16 C -0.146 4.146 17 C -0.183 4.183 18 C -0.105 4.105 19 Cl 0.021 6.979 20 N -0.075 5.075 21 C -0.058 4.058 22 N -0.075 5.075 23 H 0.113 0.887 24 H 0.031 0.969 25 H 0.050 0.950 26 H 0.073 0.927 27 H 0.061 0.939 28 H 0.102 0.898 29 H 0.089 0.911 30 H 0.189 0.811 31 H 0.105 0.895 32 H 0.112 0.888 33 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 3.423 -9.043 -17.429 19.932 hybrid contribution 0.915 -0.057 0.395 0.999 sum 4.338 -9.100 -17.034 19.794 Atomic orbital electron populations 1.22102 0.98002 0.99505 1.00915 1.19028 0.90961 0.94555 0.79771 0.91716 1.21313 1.31690 1.12950 0.90192 0.92242 1.24881 0.94960 0.95010 0.98912 1.69878 1.36413 1.22699 1.23709 0.86486 0.78630 0.79876 0.82338 1.20610 1.21153 1.19957 1.48130 1.47553 1.12074 1.22723 1.21974 1.00625 0.82127 1.01923 1.16897 0.79679 0.85348 0.81265 1.90756 1.56521 1.17742 1.76790 1.22337 1.01443 0.92120 0.98699 1.21477 1.03360 1.00845 0.92659 1.21888 1.01600 0.93025 0.93992 1.98381 1.69323 1.97769 1.32440 1.45725 1.31808 1.14563 1.15436 1.22214 1.04067 0.82997 0.96488 1.73989 1.18840 1.17344 0.97296 0.88678 0.96883 0.94999 0.92715 0.93858 0.89762 0.91129 0.81107 0.89452 0.88799 0.87911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.59 8.96 37.16 0.33 -3.26 16 2 C 0.26 6.77 2.62 -69.08 -0.18 6.59 16 3 H 0.07 1.95 6.91 -51.93 -0.36 1.59 16 4 C -0.52 -14.51 8.37 -34.44 -0.29 -14.79 16 5 H 0.06 1.64 7.65 -52.49 -0.40 1.24 16 6 C 0.06 1.79 5.30 -17.82 -0.09 1.69 16 7 N -0.89 -25.40 11.32 55.43 0.63 -24.78 16 8 Si 0.90 21.38 29.54 -169.99 -5.02 16.36 16 9 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 10 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 11 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 12 N -0.57 -13.19 2.75 -176.42 -0.49 -13.67 16 13 C 0.08 1.47 9.04 59.85 0.54 2.01 16 14 C 0.58 13.23 7.68 -12.39 -0.10 13.13 16 15 O -0.54 -13.96 16.26 5.30 0.09 -13.87 16 16 C 0.01 0.26 6.86 -82.77 -0.57 -0.31 16 17 C -0.15 -2.40 10.80 -39.31 -0.42 -2.83 16 18 C 0.05 0.58 7.44 -17.10 -0.13 0.45 16 19 Cl -0.01 -0.07 28.67 -51.86 -1.49 -1.55 16 20 N -0.29 -3.53 3.70 -64.87 -0.24 -3.77 16 21 C 0.08 0.58 11.14 59.85 0.67 1.24 16 22 N -0.24 -3.74 8.40 33.42 0.28 -3.46 16 23 H 0.09 2.52 6.07 -51.93 -0.32 2.21 16 24 H 0.01 0.28 8.14 -51.93 -0.42 -0.14 16 25 H 0.03 0.72 6.67 -51.93 -0.35 0.37 16 26 H 0.26 7.13 8.31 -40.82 -0.34 6.79 16 27 H 0.04 0.81 8.14 -51.93 -0.42 0.38 16 28 H 0.08 1.42 5.02 -51.93 -0.26 1.16 16 29 H 0.07 1.32 6.44 -51.93 -0.33 0.99 16 30 H 0.17 2.49 8.06 -52.48 -0.42 2.07 16 31 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 32 H 0.09 0.48 7.72 -51.92 -0.40 0.08 16 33 H 0.10 0.61 8.14 -51.93 -0.42 0.19 16 LS Contribution 295.57 15.07 4.45 4.45 Total: -1.00 -32.28 295.57 -5.69 -37.97 By element: Atomic # 1 Polarization: 2.05 SS G_CDS: -3.67 Total: -1.61 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: -0.24 Total: 3.93 kcal Atomic # 7 Polarization: -45.86 SS G_CDS: 0.18 Total: -45.68 kcal Atomic # 8 Polarization: -13.96 SS G_CDS: 0.09 Total: -13.87 kcal Atomic # 14 Polarization: 21.38 SS G_CDS: -5.02 Total: 16.36 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.49 Total: -1.55 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -32.28 -5.69 -37.97 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001355146530.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.057 kcal (2) G-P(sol) polarization free energy of solvation -32.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.971 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds