Wall clock time and date at job start Mon Mar 30 2020 01:28:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.34238 * 125.74057 * 2 1 4 4 C 1.38068 * 107.44058 * 179.97438 * 3 2 1 5 5 C 1.47386 * 126.42245 * 179.97438 * 4 3 2 6 6 O 1.21610 * 119.99819 * 179.97438 * 5 4 3 7 7 N 1.34777 * 119.99922 * 0.02562 * 5 4 3 8 8 C 1.46496 * 119.99614 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.46851 * 179.97438 * 8 7 5 10 10 C 1.53006 * 109.47298 * 179.97438 * 9 8 7 11 11 C 1.50696 * 109.47210 * 180.02562 * 10 9 8 12 12 H 1.08002 * 120.00318 * 0.02562 * 11 10 9 13 13 C 1.37879 * 119.99926 * 180.02562 * 11 10 9 14 14 N 1.31513 * 119.99816 * 359.97438 * 13 11 10 15 15 Si 1.86802 * 119.99923 * 179.97438 * 13 11 10 16 16 H 1.48503 * 109.47049 * 89.99983 * 15 13 11 17 17 H 1.48496 * 109.46789 * 209.99372 * 15 13 11 18 18 H 1.48493 * 109.47414 * 329.99794 * 15 13 11 19 19 C 1.41395 * 107.15241 * 0.26153 * 4 3 2 20 20 Cl 1.73600 * 126.00140 * 179.71823 * 19 4 3 21 21 N 1.30532 * 107.99170 * 359.55557 * 19 4 3 22 22 H 1.09006 * 109.47146 * 90.00209 * 1 2 3 23 23 H 1.09006 * 109.47527 * 210.00335 * 1 2 3 24 24 H 1.08996 * 109.47535 * 330.00273 * 1 2 3 25 25 H 1.08001 * 126.27688 * 0.02562 * 3 2 1 26 26 H 0.96996 * 119.99887 * 359.97438 * 7 5 4 27 27 H 1.09000 * 109.47287 * 299.99298 * 8 7 5 28 28 H 1.09002 * 109.47320 * 59.99900 * 8 7 5 29 29 H 1.09001 * 109.47671 * 299.99654 * 9 8 7 30 30 H 1.09006 * 109.47297 * 59.99934 * 9 8 7 31 31 H 1.09001 * 109.46675 * 300.00507 * 10 9 8 32 32 H 1.08994 * 109.47046 * 60.00071 * 10 9 8 33 33 H 0.97005 * 119.99644 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2490 1.0896 0.0000 4 6 3.5599 0.6560 0.0006 5 6 4.7631 1.5073 0.0003 6 8 5.8677 0.9986 0.0013 7 7 4.6391 2.8493 -0.0002 8 6 5.8351 3.6953 -0.0010 9 6 5.4183 5.1675 -0.0020 10 6 6.6674 6.0512 -0.0023 11 6 6.2569 7.5011 -0.0026 12 1 5.2099 7.7660 -0.0022 13 6 7.2180 8.4897 -0.0034 14 7 8.4930 8.1672 -0.0034 15 14 6.7092 10.2871 -0.0046 16 1 6.5746 10.7643 1.3952 17 1 7.7410 11.0931 -0.7052 18 1 5.4077 10.4327 -0.7045 19 6 3.5316 -0.7576 -0.0052 20 17 4.9153 -1.8059 -0.0139 21 7 2.2823 -1.1359 0.0006 22 1 -0.3634 0.0000 -1.0277 23 1 -0.3634 -0.8900 0.5139 24 1 -0.3634 0.8900 0.5138 25 1 1.9156 2.1168 0.0004 26 1 3.7580 3.2549 -0.0006 27 1 6.4288 3.4861 0.8888 28 1 6.4280 3.4853 -0.8912 29 1 4.8248 5.3766 -0.8920 30 1 4.8251 5.3778 0.8880 31 1 7.2606 5.8419 0.8879 32 1 7.2609 5.8410 -0.8920 33 1 9.1692 8.8627 -0.0036 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001435091763.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:28:12 Heat of formation + Delta-G solvation = 22.522265 kcal Electronic energy + Delta-G solvation = -17520.579789 eV Core-core repulsion = 14415.732423 eV Total energy + Delta-G solvation = -3104.847366 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.72124 -38.98578 -36.85478 -35.33300 -33.57697 -33.31931 -31.60608 -30.41877 -27.56459 -26.54743 -23.64750 -22.38621 -21.37990 -20.65567 -19.92127 -18.01718 -16.39707 -16.27623 -16.21190 -15.49268 -15.11735 -15.11217 -14.46359 -13.92284 -13.88023 -13.68738 -13.31802 -13.06615 -12.28929 -11.88448 -11.83587 -11.74451 -11.68107 -10.94204 -10.90793 -10.72110 -10.60017 -9.86308 -9.85993 -9.71501 -9.37283 -9.11634 -9.07738 -8.66781 -8.37252 -6.01824 -4.05012 1.13138 1.20535 1.73317 2.41228 3.30273 3.36675 3.38815 3.47105 3.48467 4.03431 4.25183 4.43951 4.62613 4.80270 4.91296 4.95777 5.16808 5.33958 5.60382 5.78912 5.80934 6.18666 6.29703 6.51959 6.61694 6.85120 6.96724 7.01454 7.64008 7.76562 7.77080 7.97140 8.37540 8.47913 9.01774 9.59126 11.09447 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.030407 B = 0.003190 C = 0.002896 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 920.605154 B = 8775.738009 C = 9665.279221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.096 3.904 2 N -0.351 5.351 3 C 0.109 3.891 4 C -0.270 4.270 5 C 0.584 3.416 6 O -0.530 6.530 7 N -0.724 5.724 8 C 0.119 3.881 9 C -0.121 4.121 10 C 0.023 3.977 11 C -0.523 4.523 12 H 0.055 0.945 13 C 0.057 3.943 14 N -0.893 5.893 15 Si 0.893 3.107 16 H -0.281 1.281 17 H -0.286 1.286 18 H -0.274 1.274 19 C 0.171 3.829 20 Cl 0.033 6.967 21 N -0.287 5.287 22 H 0.084 0.916 23 H 0.096 0.904 24 H 0.097 0.903 25 H 0.193 0.807 26 H 0.393 0.607 27 H 0.066 0.934 28 H 0.065 0.935 29 H 0.054 0.946 30 H 0.053 0.947 31 H 0.019 0.981 32 H 0.019 0.981 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.792 -16.374 0.046 24.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.044 4.044 2 N -0.131 5.131 3 C -0.043 4.043 4 C -0.286 4.286 5 C 0.369 3.631 6 O -0.407 6.407 7 N -0.374 5.374 8 C -0.004 4.004 9 C -0.159 4.159 10 C -0.014 4.014 11 C -0.561 4.561 12 H 0.073 0.927 13 C -0.145 4.145 14 N -0.532 5.532 15 Si 0.721 3.279 16 H -0.207 1.207 17 H -0.212 1.212 18 H -0.199 1.199 19 C -0.022 4.022 20 Cl 0.061 6.939 21 N -0.112 5.112 22 H 0.102 0.898 23 H 0.114 0.886 24 H 0.115 0.885 25 H 0.210 0.790 26 H 0.226 0.774 27 H 0.084 0.916 28 H 0.084 0.916 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -17.615 -17.747 0.046 25.005 hybrid contribution -0.111 1.864 -0.004 1.868 sum -17.726 -15.883 0.041 23.801 Atomic orbital electron populations 1.22101 0.72600 1.05405 1.04319 1.48180 1.07174 1.03140 1.54616 1.23183 0.89709 0.94152 0.97212 1.20315 0.93668 0.92512 1.22073 1.17112 0.87327 0.81832 0.76819 1.90819 1.26292 1.73709 1.49841 1.46002 1.10597 1.05416 1.75420 1.21643 0.86152 0.90393 1.02189 1.21889 1.01685 0.91515 1.00764 1.19030 0.91419 0.93259 0.97721 1.21201 0.92736 0.91192 1.50976 0.92681 1.25032 0.94967 0.99172 0.95302 1.69967 0.99653 1.33087 1.50503 0.86588 0.78247 0.85033 0.78075 1.20676 1.21218 1.19916 1.22696 0.89442 0.90342 0.99674 1.98434 1.34440 1.64561 1.96428 1.77235 1.00149 1.07512 1.26333 0.89792 0.88580 0.88475 0.78972 0.77350 0.91613 0.91624 0.92773 0.92779 0.96236 0.96221 0.92916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.33 11.44 59.84 0.68 1.02 16 2 N -0.35 -3.02 3.98 -67.60 -0.27 -3.28 16 3 C 0.11 0.93 10.99 -16.56 -0.18 0.75 16 4 C -0.27 -3.47 6.13 -105.04 -0.64 -4.11 16 5 C 0.58 9.07 7.81 -12.54 -0.10 8.97 16 6 O -0.53 -10.21 15.72 5.27 0.08 -10.13 16 7 N -0.72 -10.13 5.54 -61.40 -0.34 -10.47 16 8 C 0.12 2.05 5.67 -4.04 -0.02 2.03 16 9 C -0.12 -2.28 5.27 -26.73 -0.14 -2.42 16 10 C 0.02 0.58 4.97 -27.88 -0.14 0.45 16 11 C -0.52 -14.40 9.11 -34.44 -0.31 -14.71 16 12 H 0.05 1.45 7.74 -52.49 -0.41 1.05 16 13 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 14 N -0.89 -26.66 13.29 55.43 0.74 -25.93 16 15 Si 0.89 21.25 29.54 -169.99 -5.02 16.23 16 16 H -0.28 -6.59 7.11 56.52 0.40 -6.18 16 17 H -0.29 -6.79 7.11 56.52 0.40 -6.38 16 18 H -0.27 -6.34 7.11 56.52 0.40 -5.94 16 19 C 0.17 2.34 7.88 -16.90 -0.13 2.21 16 20 Cl 0.03 0.46 28.00 -51.86 -1.45 -0.99 16 21 N -0.29 -3.52 12.50 33.18 0.41 -3.11 16 22 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 23 H 0.10 0.30 8.14 -51.93 -0.42 -0.13 16 24 H 0.10 0.08 8.14 -51.93 -0.42 -0.35 16 25 H 0.19 0.80 7.46 -52.49 -0.39 0.40 16 26 H 0.39 4.11 7.39 -40.82 -0.30 3.80 16 27 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 28 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 29 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 30 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 31 H 0.02 0.52 8.14 -51.93 -0.42 0.09 16 32 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 LS Contribution 308.80 15.07 4.65 4.65 Total: -1.00 -35.11 308.80 -6.32 -41.43 By element: Atomic # 1 Polarization: -0.03 SS G_CDS: -4.04 Total: -4.07 kcal Atomic # 6 Polarization: -3.24 SS G_CDS: -1.09 Total: -4.33 kcal Atomic # 7 Polarization: -43.33 SS G_CDS: 0.54 Total: -42.79 kcal Atomic # 8 Polarization: -10.21 SS G_CDS: 0.08 Total: -10.13 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Atomic # 17 Polarization: 0.46 SS G_CDS: -1.45 Total: -0.99 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -35.11 -6.32 -41.43 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001435091763.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.952 kcal (2) G-P(sol) polarization free energy of solvation -35.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.430 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds