Wall clock time and date at job start Mon Mar 30 2020 01:15:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 N 1.46499 * 109.46995 * 79.67046 * 3 2 1 5 5 C 1.36743 * 120.00269 * 262.54804 * 4 3 2 6 6 H 1.08003 * 119.99881 * 207.50209 * 5 4 3 7 7 C 1.39128 * 119.99943 * 27.49868 * 5 4 3 8 8 N 1.31305 * 120.00071 * 26.32354 * 7 5 4 9 9 Si 1.86802 * 120.00057 * 206.32092 * 7 5 4 10 10 H 1.48502 * 109.47142 * 59.99961 * 9 7 5 11 11 H 1.48500 * 109.47100 * 179.97438 * 9 7 5 12 12 H 1.48499 * 109.47103 * 300.00226 * 9 7 5 13 13 C 1.34785 * 119.99613 * 82.54798 * 4 3 2 14 14 O 1.21580 * 119.99516 * 181.68198 * 13 4 3 15 15 C 1.47927 * 120.00095 * 1.68329 * 13 4 3 16 16 C 1.39932 * 119.38392 * 172.29106 * 15 13 4 17 17 C 1.36914 * 119.60279 * 180.02562 * 16 15 13 18 18 C 1.39860 * 118.26617 * 0.02562 * 17 16 15 19 19 N 1.34641 * 134.98280 * 180.02562 * 18 17 16 20 20 N 1.28679 * 109.16040 * 179.97438 * 19 18 17 21 21 N 1.28774 * 111.83972 * 0.02562 * 20 19 18 22 22 H 0.96998 * 125.85514 * 180.02562 * 21 20 19 23 23 C 1.37244 * 108.27771 * 359.97438 * 21 20 19 24 24 N 1.31971 * 134.69176 * 180.02562 * 23 21 20 25 25 H 4.40645 * 5.51406 * 180.02562 * 4 1 2 26 26 H 1.08992 * 109.47185 * 319.66991 * 3 2 1 27 27 H 1.08998 * 109.46575 * 199.66917 * 3 2 1 28 28 H 0.96997 * 120.00317 * 180.02562 * 8 7 5 29 29 H 1.07997 * 120.19251 * 0.04345 * 16 15 13 30 30 H 1.08000 * 120.86499 * 179.97438 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1345 -0.2468 -1.3588 5 6 3.5078 -1.5082 -1.7321 6 1 4.2476 -1.6454 -2.5070 7 6 2.9346 -2.6149 -1.1138 8 7 1.7353 -2.5247 -0.5868 9 14 3.8712 -4.2291 -1.0332 10 1 5.1448 -4.0263 -0.2969 11 1 3.0484 -5.2442 -0.3276 12 1 4.1654 -4.7000 -2.4105 13 6 3.2159 0.7690 -2.2410 14 8 3.5922 0.5581 -3.3777 15 6 2.8475 2.1403 -1.8262 16 6 3.0890 3.2091 -2.6965 17 6 2.7502 4.4802 -2.3169 18 6 2.1692 4.6628 -1.0579 19 7 1.7186 5.7240 -0.3624 20 7 1.2693 5.3236 0.7750 21 7 1.3811 4.0481 0.9122 22 1 1.1070 3.5339 1.6877 23 6 1.9533 3.5411 -0.2276 24 7 2.2965 2.3340 -0.6359 25 1 -1.0500 0.0002 -0.0001 26 1 3.0098 -0.7825 0.6650 27 1 3.0089 0.9685 0.3459 28 1 1.3359 -3.2962 -0.1554 29 1 3.5396 3.0323 -3.6619 30 1 2.9279 5.3200 -2.9722 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001467389127.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:15:23 Heat of formation + Delta-G solvation = 181.948348 kcal Electronic energy + Delta-G solvation = -20162.118940 eV Core-core repulsion = 16963.077314 eV Total energy + Delta-G solvation = -3199.041626 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -43.12539 -39.60431 -37.63223 -35.36423 -34.03797 -32.43824 -31.51584 -31.26272 -30.49406 -26.58385 -25.90937 -24.39753 -23.41765 -22.47400 -20.32514 -18.47841 -18.17757 -17.88017 -17.12497 -16.55357 -16.26582 -15.14749 -14.95835 -14.33164 -14.27373 -13.65992 -13.44327 -12.93291 -12.60452 -12.34051 -12.22900 -12.09702 -11.84566 -11.49032 -11.45329 -11.13597 -10.74154 -10.56285 -9.54644 -9.34504 -9.22150 -9.07869 -8.89250 -8.76229 -8.42309 -8.01256 -6.63601 -4.08371 0.39905 1.25676 2.32363 2.36051 3.03060 3.11953 3.14254 3.37746 3.72417 3.93276 3.99606 4.13206 4.28972 4.43805 4.59296 4.76625 4.85460 5.07675 5.39945 5.55375 5.63103 5.75696 5.95529 6.16236 6.46086 6.49655 6.63711 6.83251 7.01316 7.26831 7.73124 7.87815 8.17382 8.29521 8.85813 8.88007 9.04099 9.69690 10.32700 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.029372 B = 0.006156 C = 0.005361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 953.044622 B = 4547.327989 C = 5221.981618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.269 4.269 2 C -0.089 4.089 3 C 0.222 3.778 4 N -0.389 5.389 5 C -0.313 4.313 6 H 0.110 0.890 7 C 0.041 3.959 8 N -0.817 5.817 9 Si 0.923 3.077 10 H -0.269 1.269 11 H -0.282 1.282 12 H -0.268 1.268 13 C 0.469 3.531 14 O -0.578 6.578 15 C 0.174 3.826 16 C -0.127 4.127 17 C -0.014 4.014 18 C -0.050 4.050 19 N -0.243 5.243 20 N -0.017 5.017 21 N -0.409 5.409 22 H 0.455 0.545 23 C 0.222 3.778 24 N -0.451 5.451 25 H 0.194 0.806 26 H 0.084 0.916 27 H 0.104 0.896 28 H 0.276 0.724 29 H 0.160 0.840 30 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.278 7.469 4.012 8.483 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.288 4.288 2 C -0.091 4.091 3 C 0.099 3.901 4 N -0.103 5.103 5 C -0.442 4.442 6 H 0.128 0.872 7 C -0.170 4.170 8 N -0.450 5.450 9 Si 0.748 3.252 10 H -0.194 1.194 11 H -0.207 1.207 12 H -0.193 1.193 13 C 0.259 3.741 14 O -0.463 6.463 15 C 0.022 3.978 16 C -0.151 4.151 17 C -0.044 4.044 18 C -0.178 4.178 19 N -0.120 5.120 20 N 0.000 5.000 21 N -0.139 5.139 22 H 0.302 0.698 23 C -0.021 4.021 24 N -0.170 5.170 25 H 0.211 0.789 26 H 0.102 0.898 27 H 0.121 0.879 28 H 0.087 0.913 29 H 0.177 0.823 30 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -0.290 7.927 4.770 9.256 hybrid contribution 0.054 -1.548 -0.204 1.562 sum -0.236 6.379 4.566 7.848 Atomic orbital electron populations 1.24101 0.95209 1.07488 1.01962 1.22690 0.93805 0.94210 0.98374 1.18766 0.85076 1.01223 0.85039 1.43692 1.50436 1.07462 1.08680 1.19768 1.21291 0.80220 1.22877 0.87239 1.25565 0.94514 1.00150 0.96767 1.70118 1.10731 1.32304 1.31849 0.86054 0.79677 0.80235 0.79272 1.19359 1.20730 1.19252 1.17432 0.88223 0.83003 0.85480 1.90653 1.54187 1.82833 1.18608 1.21871 0.92453 0.96278 0.87214 1.21724 1.00369 0.91030 1.01973 1.20366 0.94169 0.97850 0.92007 1.20543 1.07725 0.91013 0.98524 1.75230 1.13382 1.24530 0.98863 1.77993 1.15079 0.92411 1.14500 1.44532 1.47198 1.06288 1.15915 0.69780 1.20162 1.00402 0.92538 0.89046 1.67403 1.13919 1.19151 1.16515 0.78860 0.89835 0.87880 0.91335 0.82253 0.83283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.27 -5.55 19.23 29.55 0.57 -4.98 16 2 C -0.09 -1.95 9.69 -37.12 -0.36 -2.31 16 3 C 0.22 4.76 4.77 -6.83 -0.03 4.73 16 4 N -0.39 -9.45 2.57 -118.99 -0.31 -9.76 16 5 C -0.31 -8.03 9.05 -15.03 -0.14 -8.17 16 6 H 0.11 2.90 7.62 -52.48 -0.40 2.50 16 7 C 0.04 1.00 4.66 -17.45 -0.08 0.91 16 8 N -0.82 -20.30 10.32 55.50 0.57 -19.73 16 9 Si 0.92 18.68 29.63 -169.99 -5.04 13.65 16 10 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 11 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 12 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 13 C 0.47 11.17 7.52 -12.29 -0.09 11.08 16 14 O -0.58 -15.19 16.07 5.30 0.09 -15.11 16 15 C 0.17 3.44 6.60 -82.94 -0.55 2.89 16 16 C -0.13 -2.08 9.55 -39.43 -0.38 -2.46 16 17 C -0.01 -0.20 10.16 -39.45 -0.40 -0.60 16 18 C -0.05 -0.81 7.38 -84.90 -0.63 -1.43 16 19 N -0.24 -3.92 12.43 32.12 0.40 -3.52 16 20 N -0.02 -0.26 13.28 60.35 0.80 0.54 16 21 N -0.41 -5.61 7.06 31.13 0.22 -5.39 16 22 H 0.45 4.70 8.96 -190.26 -1.71 2.99 16 23 C 0.22 3.68 8.56 -156.28 -1.34 2.34 16 24 N -0.45 -8.32 4.86 -8.92 -0.04 -8.37 16 25 H 0.19 3.37 7.80 -54.09 -0.42 2.95 16 26 H 0.08 1.81 7.17 -51.93 -0.37 1.44 16 27 H 0.10 2.00 5.40 -51.93 -0.28 1.72 16 28 H 0.28 6.49 8.31 -40.82 -0.34 6.15 16 29 H 0.16 2.42 7.63 -52.49 -0.40 2.02 16 30 H 0.15 1.60 8.06 -52.49 -0.42 1.18 16 LS Contribution 275.64 15.07 4.15 4.15 Total: -1.00 -30.07 275.64 -5.71 -35.79 By element: Atomic # 1 Polarization: 8.85 SS G_CDS: -3.14 Total: 5.71 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: -3.42 Total: 2.01 kcal Atomic # 7 Polarization: -47.85 SS G_CDS: 1.64 Total: -46.21 kcal Atomic # 8 Polarization: -15.19 SS G_CDS: 0.09 Total: -15.11 kcal Atomic # 14 Polarization: 18.68 SS G_CDS: -5.04 Total: 13.65 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.07 -5.71 -35.79 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001467389127.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 217.736 kcal (2) G-P(sol) polarization free energy of solvation -30.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 187.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.713 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.788 kcal (6) G-S(sol) free energy of system = (1) + (5) 181.948 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds