Wall clock time and date at job start Mon Mar 30 2020 00:55:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47257 * 316.58370 * 3 2 1 5 5 C 1.36694 * 119.99945 * 277.54165 * 4 3 2 6 6 H 1.08004 * 119.99989 * 179.37683 * 5 4 3 7 7 C 1.39137 * 120.00343 * 359.38144 * 5 4 3 8 8 N 1.31305 * 119.99583 * 27.12830 * 7 5 4 9 9 Si 1.86792 * 120.00027 * 207.13585 * 7 5 4 10 10 H 1.48506 * 109.47302 * 94.99208 * 9 7 5 11 11 H 1.48504 * 109.47270 * 214.98936 * 9 7 5 12 12 H 1.48501 * 109.47599 * 334.99075 * 9 7 5 13 13 C 1.34778 * 120.00065 * 97.54437 * 4 3 2 14 14 O 1.21697 * 120.00229 * 185.48028 * 13 4 3 15 15 C 1.46990 * 120.00025 * 5.47953 * 13 4 3 16 16 C 1.37938 * 119.94979 * 332.37345 * 15 13 4 17 17 C 1.39761 * 119.91357 * 179.97438 * 16 15 13 18 18 C 1.36365 * 119.83743 * 0.02562 * 17 16 15 19 19 C 1.40744 * 119.73271 * 0.25284 * 18 17 16 20 20 N 1.32837 * 132.74351 * 180.39559 * 19 18 17 21 21 C 1.32382 * 109.74139 * 179.56853 * 20 19 18 22 22 N 1.31379 * 109.62129 * 359.75095 * 21 20 19 23 23 N 1.36575 * 119.88583 * 359.48691 * 19 18 17 24 24 H 1.08999 * 109.47025 * 196.58504 * 3 2 1 25 25 H 1.08998 * 109.47296 * 76.58274 * 3 2 1 26 26 H 0.97003 * 119.99824 * 180.02562 * 8 7 5 27 27 H 1.08000 * 120.04037 * 0.02562 * 16 15 13 28 28 H 1.08005 * 120.08181 * 180.02562 * 17 16 15 29 29 H 1.07999 * 120.13631 * 179.97438 * 18 17 16 30 30 H 1.07998 * 125.18906 * 179.71803 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0968 -1.0024 0.9493 5 6 3.1780 -0.7014 2.2802 6 1 3.5288 -1.4442 2.9814 7 6 2.8086 0.5617 2.7317 8 7 1.9232 1.2647 2.0637 9 14 3.5724 1.2576 4.2878 10 1 4.7321 2.1135 3.9302 11 1 2.5633 2.0698 5.0142 12 1 4.0290 0.1431 5.1565 13 6 3.4664 -2.2219 0.5103 14 8 3.7774 -3.0871 1.3076 15 6 3.4941 -2.5069 -0.9314 16 6 2.6556 -1.8208 -1.7852 17 6 2.6829 -2.0920 -3.1560 18 6 3.5386 -3.0348 -3.6442 19 6 4.3852 -3.7325 -2.7625 20 7 5.3021 -4.6753 -2.9497 21 6 5.8431 -5.0098 -1.7887 22 7 5.3011 -4.2966 -0.8277 23 7 4.3532 -3.4549 -1.4256 24 1 2.9708 0.9857 0.2933 25 1 2.9714 -0.2376 -0.9996 26 1 1.6660 2.1455 2.3783 27 1 1.9795 -1.0744 -1.3949 28 1 2.0278 -1.5561 -3.8270 29 1 3.5634 -3.2485 -4.7025 30 1 6.6122 -5.7556 -1.6523 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001542734781.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:55:50 Heat of formation + Delta-G solvation = 174.000015 kcal Electronic energy + Delta-G solvation = -20217.424788 eV Core-core repulsion = 17018.038496 eV Total energy + Delta-G solvation = -3199.386292 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -42.38810 -39.62273 -37.13573 -36.23637 -34.63860 -33.15497 -32.51631 -30.72732 -29.76973 -27.83209 -25.87065 -23.90083 -23.20320 -22.23002 -19.80989 -18.46473 -17.85692 -17.02703 -16.70623 -16.24842 -15.90678 -15.75558 -15.02532 -14.37002 -14.15731 -13.85650 -13.56395 -13.26915 -12.53208 -12.40497 -12.03530 -11.90435 -11.75356 -11.56441 -11.43890 -11.33405 -10.92280 -10.75454 -10.57893 -10.46845 -9.83270 -9.50748 -9.30024 -8.90623 -8.53099 -7.98946 -6.95352 -4.21435 0.51801 1.16230 2.24508 2.74117 2.97498 3.04452 3.09728 3.30334 3.44289 3.55387 3.81341 3.88838 4.10597 4.23290 4.51979 4.65203 4.82618 4.95571 5.05302 5.10174 5.39275 5.47018 5.70998 5.87827 6.10151 6.29336 6.34632 6.49483 6.61781 6.89568 7.07906 7.46632 7.91692 8.20235 8.46278 8.62971 8.76002 9.37000 10.06729 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.024613 B = 0.006634 C = 0.005479 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1137.320220 B = 4219.660797 C = 5109.464011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.454 5.454 2 C 0.244 3.756 3 C 0.174 3.826 4 N -0.406 5.406 5 C -0.301 4.301 6 H 0.123 0.877 7 C 0.037 3.963 8 N -0.851 5.851 9 Si 0.935 3.065 10 H -0.270 1.270 11 H -0.281 1.281 12 H -0.263 1.263 13 C 0.460 3.540 14 O -0.546 6.546 15 C 0.144 3.856 16 C -0.187 4.187 17 C -0.054 4.054 18 C -0.118 4.118 19 C 0.275 3.725 20 N -0.555 5.555 21 C 0.215 3.785 22 N -0.303 5.303 23 N -0.262 5.262 24 H 0.135 0.865 25 H 0.116 0.884 26 H 0.283 0.717 27 H 0.179 0.821 28 H 0.152 0.848 29 H 0.154 0.846 30 H 0.222 0.778 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.352 0.353 -9.671 10.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.134 5.134 2 C -0.073 4.073 3 C 0.048 3.952 4 N -0.124 5.124 5 C -0.428 4.428 6 H 0.141 0.859 7 C -0.170 4.170 8 N -0.488 5.488 9 Si 0.760 3.240 10 H -0.196 1.196 11 H -0.206 1.206 12 H -0.187 1.187 13 C 0.249 3.751 14 O -0.428 6.428 15 C 0.030 3.970 16 C -0.211 4.211 17 C -0.079 4.079 18 C -0.140 4.140 19 C 0.022 3.978 20 N -0.286 5.286 21 C -0.085 4.085 22 N -0.133 5.133 23 N -0.038 5.038 24 H 0.153 0.847 25 H 0.133 0.867 26 H 0.094 0.906 27 H 0.196 0.804 28 H 0.170 0.830 29 H 0.172 0.828 30 H 0.238 0.762 Dipole moment (debyes) X Y Z Total from point charges 2.180 -0.233 -8.703 8.975 hybrid contribution 0.476 0.588 0.726 1.049 sum 2.656 0.355 -7.977 8.415 Atomic orbital electron populations 1.80955 1.13140 1.09148 1.10152 1.28715 0.94880 0.92286 0.91462 1.19993 0.82235 0.97960 0.95040 1.43591 1.52088 1.09062 1.07676 1.20037 1.41514 0.98674 0.82594 0.85917 1.25455 0.94613 0.96212 1.00697 1.69826 1.24216 1.13541 1.41204 0.85746 0.79002 0.79240 0.80016 1.19577 1.20615 1.18702 1.16962 0.89014 0.83793 0.85325 1.90780 1.53742 1.43787 1.54460 1.20584 0.91016 0.89092 0.96285 1.22383 1.02045 1.03098 0.93554 1.21149 0.96420 0.95375 0.94997 1.20256 0.96563 0.97573 0.99597 1.21870 0.96786 0.95304 0.83837 1.70768 1.13632 1.17187 1.27016 1.26230 0.98676 0.98215 0.85426 1.78983 1.06342 1.08728 1.19222 1.47602 1.24436 1.24543 1.07180 0.84730 0.86667 0.90569 0.80404 0.83028 0.82815 0.76179 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -9.80 18.54 42.15 0.78 -9.02 16 2 C 0.24 4.89 11.37 -20.76 -0.24 4.65 16 3 C 0.17 3.19 4.76 -6.83 -0.03 3.16 16 4 N -0.41 -9.11 2.60 -119.33 -0.31 -9.42 16 5 C -0.30 -7.33 9.39 -15.05 -0.14 -7.47 16 6 H 0.12 3.20 7.29 -52.48 -0.38 2.82 16 7 C 0.04 0.84 5.00 -17.44 -0.09 0.75 16 8 N -0.85 -19.06 8.82 55.51 0.49 -18.57 16 9 Si 0.94 18.08 29.63 -169.99 -5.04 13.05 16 10 H -0.27 -5.10 7.11 56.52 0.40 -4.70 16 11 H -0.28 -5.45 7.11 56.52 0.40 -5.04 16 12 H -0.26 -5.23 7.11 56.52 0.40 -4.83 16 13 C 0.46 10.73 7.47 -12.71 -0.09 10.63 16 14 O -0.55 -14.88 15.98 5.19 0.08 -14.80 16 15 C 0.14 2.80 6.53 -82.05 -0.54 2.27 16 16 C -0.19 -2.82 7.51 -39.12 -0.29 -3.12 16 17 C -0.05 -0.62 10.04 -39.69 -0.40 -1.02 16 18 C -0.12 -1.49 10.09 -39.31 -0.40 -1.89 16 19 C 0.28 4.70 7.88 -156.35 -1.23 3.47 16 20 N -0.56 -9.54 11.24 -13.99 -0.16 -9.69 16 21 C 0.22 3.58 12.98 -92.00 -1.19 2.39 16 22 N -0.30 -6.25 12.06 29.25 0.35 -5.90 16 23 N -0.26 -5.19 3.92 -8.82 -0.03 -5.23 16 24 H 0.14 2.47 6.27 -51.93 -0.33 2.14 16 25 H 0.12 1.69 4.07 -52.60 -0.21 1.47 16 26 H 0.28 6.03 8.31 -40.82 -0.34 5.70 16 27 H 0.18 2.66 2.81 -52.49 -0.15 2.52 16 28 H 0.15 1.11 8.06 -52.48 -0.42 0.69 16 29 H 0.15 1.45 8.06 -52.49 -0.42 1.03 16 30 H 0.22 2.56 8.06 -52.49 -0.42 2.13 16 LS Contribution 270.05 15.07 4.07 4.07 Total: -1.00 -31.90 270.05 -5.88 -37.78 By element: Atomic # 1 Polarization: 5.39 SS G_CDS: -1.47 Total: 3.91 kcal Atomic # 6 Polarization: 18.46 SS G_CDS: -4.64 Total: 13.82 kcal Atomic # 7 Polarization: -58.95 SS G_CDS: 1.12 Total: -57.83 kcal Atomic # 8 Polarization: -14.88 SS G_CDS: 0.08 Total: -14.80 kcal Atomic # 14 Polarization: 18.08 SS G_CDS: -5.04 Total: 13.05 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -31.90 -5.88 -37.78 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001542734781.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 211.777 kcal (2) G-P(sol) polarization free energy of solvation -31.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 179.878 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.777 kcal (6) G-S(sol) free energy of system = (1) + (5) 174.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds