Wall clock time and date at job start Mon Mar 30 2020 00:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47177 * 100.29549 * 3 2 1 5 5 C 1.36643 * 119.99781 * 264.41574 * 4 3 2 6 6 H 1.07998 * 120.00309 * 132.13502 * 5 4 3 7 7 C 1.39200 * 119.99561 * 312.13079 * 5 4 3 8 8 N 1.31265 * 120.00093 * 3.24877 * 7 5 4 9 9 Si 1.86800 * 119.99732 * 183.24842 * 7 5 4 10 10 H 1.48503 * 109.46859 * 89.99903 * 9 7 5 11 11 H 1.48492 * 109.47062 * 209.99779 * 9 7 5 12 12 H 1.48502 * 109.47097 * 330.00107 * 9 7 5 13 13 C 1.34777 * 120.00262 * 84.41013 * 4 3 2 14 14 O 1.21595 * 119.99606 * 4.84801 * 13 4 3 15 15 C 1.47891 * 120.00108 * 184.85405 * 13 4 3 16 16 C 1.41379 * 119.97310 * 174.20090 * 15 13 4 17 17 C 1.35292 * 119.31103 * 179.97438 * 16 15 13 18 18 N 1.36689 * 119.20237 * 359.97438 * 17 16 15 19 19 N 1.39972 * 132.46524 * 180.02562 * 18 17 16 20 20 C 1.31516 * 108.89352 * 180.02562 * 19 18 17 21 21 C 1.38465 * 109.08647 * 359.97438 * 20 19 18 22 22 C 1.37434 * 119.95974 * 0.02562 * 18 17 16 23 23 N 1.32157 * 119.96837 * 353.91778 * 15 13 4 24 24 H 1.08991 * 109.47181 * 340.29094 * 3 2 1 25 25 H 1.09010 * 109.46933 * 220.29041 * 3 2 1 26 26 H 0.96999 * 119.99875 * 180.02562 * 8 7 5 27 27 H 1.07998 * 120.34209 * 359.96701 * 16 15 13 28 28 H 1.08001 * 120.39876 * 180.02562 * 17 16 15 29 29 H 1.08001 * 125.45661 * 179.97438 * 20 19 18 30 30 H 1.08002 * 126.17665 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0962 0.2477 -1.3590 5 6 3.4330 -0.8027 -2.1654 6 1 3.0675 -0.8427 -3.1809 7 6 4.2473 -1.8211 -1.6781 8 7 4.6394 -1.8052 -0.4255 9 14 4.7820 -3.2102 -2.8067 10 1 6.0592 -2.8448 -3.4705 11 1 4.9746 -4.4486 -2.0104 12 1 3.7374 -3.4412 -3.8366 13 6 3.2131 1.5110 -1.8138 14 8 2.9981 2.4477 -1.0689 15 6 3.6028 1.7580 -3.2189 16 6 3.6064 3.0763 -3.7296 17 6 3.9656 3.2870 -5.0169 18 7 4.3176 2.2192 -5.7943 19 7 4.7269 2.1161 -7.1289 20 6 4.9523 0.8509 -7.4086 21 6 4.7028 0.0865 -6.2813 22 6 4.3031 0.9508 -5.2655 23 7 3.9527 0.7467 -3.9945 24 1 2.9717 -0.9666 0.3465 25 1 2.9710 0.7848 0.6646 26 1 5.2071 -2.5147 -0.0860 27 1 3.3251 3.9065 -3.0988 28 1 3.9750 4.2868 -5.4250 29 1 5.2796 0.4693 -8.3645 30 1 4.8000 -0.9863 -6.2043 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001542734864.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:37 Heat of formation + Delta-G solvation = 140.732854 kcal Electronic energy + Delta-G solvation = -20022.456651 eV Core-core repulsion = 16821.627787 eV Total energy + Delta-G solvation = -3200.828864 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.87548 -39.24572 -37.22299 -35.86978 -34.95410 -33.63255 -31.85221 -30.72825 -28.99160 -27.73561 -25.53063 -24.31021 -23.07211 -21.26275 -20.02493 -18.44007 -18.06638 -17.03135 -16.50789 -15.75166 -15.68978 -15.06987 -14.84653 -14.16785 -13.99268 -13.74102 -13.69975 -13.08616 -12.94690 -12.78017 -12.27441 -12.05637 -11.72431 -11.43010 -11.33927 -11.23740 -10.97517 -10.80145 -10.58470 -10.44735 -9.58996 -9.41635 -9.16471 -8.74478 -7.87250 -7.60006 -6.65286 -4.36434 0.65328 1.17589 2.36695 2.83017 3.06870 3.12880 3.16384 3.21693 3.36311 3.55178 3.97029 4.09380 4.21678 4.35120 4.44201 4.70394 4.95013 5.14455 5.28153 5.44145 5.66402 5.73504 5.87358 6.09930 6.22911 6.38139 6.64690 6.74980 6.81675 7.34821 7.48150 7.68690 8.01472 8.22337 8.29257 8.76955 8.96549 9.41900 10.37256 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.016026 B = 0.008445 C = 0.006057 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1746.758871 B = 3314.854818 C = 4621.704750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.469 5.469 2 C 0.216 3.784 3 C 0.189 3.811 4 N -0.401 5.401 5 C -0.300 4.300 6 H 0.121 0.879 7 C 0.048 3.952 8 N -0.866 5.866 9 Si 0.930 3.070 10 H -0.271 1.271 11 H -0.283 1.283 12 H -0.264 1.264 13 C 0.513 3.487 14 O -0.584 6.584 15 C 0.179 3.821 16 C -0.172 4.172 17 C 0.135 3.865 18 N -0.313 5.313 19 N -0.330 5.330 20 C 0.079 3.921 21 C -0.269 4.269 22 C 0.256 3.744 23 N -0.386 5.386 24 H 0.161 0.839 25 H 0.107 0.893 26 H 0.279 0.721 27 H 0.172 0.828 28 H 0.175 0.825 29 H 0.191 0.809 30 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.063 2.861 -7.060 8.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.149 5.149 2 C -0.102 4.102 3 C 0.063 3.937 4 N -0.118 5.118 5 C -0.430 4.430 6 H 0.138 0.862 7 C -0.159 4.159 8 N -0.503 5.503 9 Si 0.756 3.244 10 H -0.196 1.196 11 H -0.209 1.209 12 H -0.188 1.188 13 C 0.302 3.698 14 O -0.468 6.468 15 C 0.014 3.986 16 C -0.196 4.196 17 C 0.001 3.999 18 N -0.086 5.086 19 N -0.156 5.156 20 C -0.097 4.097 21 C -0.300 4.300 22 C 0.026 3.974 23 N -0.102 5.102 24 H 0.178 0.822 25 H 0.125 0.875 26 H 0.089 0.911 27 H 0.189 0.811 28 H 0.193 0.807 29 H 0.208 0.792 30 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.489 3.433 -6.953 7.896 hybrid contribution 0.859 -0.751 -0.521 1.254 sum 2.348 2.682 -7.474 8.280 Atomic orbital electron populations 1.80998 1.13644 1.11432 1.08777 1.30442 0.96188 0.91148 0.92394 1.19449 0.78597 1.08171 0.87495 1.43289 1.51933 1.04782 1.11773 1.20210 1.27108 0.98925 0.96749 0.86202 1.25645 0.94621 0.99430 0.96221 1.69466 1.32915 1.34087 1.13808 0.85847 0.79833 0.78864 0.79891 1.19612 1.20877 1.18843 1.17856 0.82774 0.83826 0.85370 1.90700 1.56953 1.42816 1.56362 1.21777 0.93106 0.88648 0.95037 1.21694 1.04236 0.99539 0.94180 1.21751 0.96291 0.92052 0.89765 1.47368 1.43468 1.07469 1.10309 1.77761 1.27692 1.20061 0.90083 1.23655 0.96567 0.90046 0.99417 1.20987 1.17593 1.00325 0.91073 1.21455 0.99579 0.84233 0.92088 1.69427 1.10386 1.31072 0.99272 0.82184 0.87548 0.91058 0.81106 0.80734 0.79177 0.82410 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.44 18.54 42.15 0.78 -9.66 16 2 C 0.22 4.58 15.71 -20.76 -0.33 4.26 16 3 C 0.19 3.90 5.36 -6.83 -0.04 3.86 16 4 N -0.40 -9.05 2.47 -119.01 -0.29 -9.35 16 5 C -0.30 -6.92 7.48 -15.05 -0.11 -7.03 16 6 H 0.12 2.82 5.98 -52.49 -0.31 2.51 16 7 C 0.05 1.08 5.35 -17.44 -0.09 0.99 16 8 N -0.87 -19.83 10.97 55.51 0.61 -19.22 16 9 Si 0.93 18.40 29.56 -169.99 -5.02 13.38 16 10 H -0.27 -5.42 7.11 56.52 0.40 -5.02 16 11 H -0.28 -5.55 7.11 56.52 0.40 -5.15 16 12 H -0.26 -5.18 7.11 56.52 0.40 -4.78 16 13 C 0.51 11.39 7.55 -12.31 -0.09 11.29 16 14 O -0.58 -13.46 16.03 5.28 0.08 -13.38 16 15 C 0.18 3.58 6.70 -82.58 -0.55 3.02 16 16 C -0.17 -2.73 9.58 -39.44 -0.38 -3.11 16 17 C 0.13 1.93 11.30 -16.44 -0.19 1.74 16 18 N -0.31 -5.35 3.91 -12.18 -0.05 -5.39 16 19 N -0.33 -5.34 12.66 30.45 0.39 -4.95 16 20 C 0.08 1.12 11.93 -17.60 -0.21 0.91 16 21 C -0.27 -4.41 10.92 -39.13 -0.43 -4.84 16 22 C 0.26 4.81 7.92 -155.62 -1.23 3.58 16 23 N -0.39 -7.96 6.51 -8.81 -0.06 -8.02 16 24 H 0.16 3.37 5.50 -51.93 -0.29 3.09 16 25 H 0.11 2.08 7.53 -51.92 -0.39 1.69 16 26 H 0.28 6.05 8.31 -40.82 -0.34 5.71 16 27 H 0.17 2.36 7.70 -52.49 -0.40 1.95 16 28 H 0.18 1.76 8.06 -52.49 -0.42 1.33 16 29 H 0.19 1.80 8.06 -52.49 -0.42 1.38 16 30 H 0.16 2.37 8.06 -52.49 -0.42 1.95 16 LS Contribution 280.97 15.07 4.23 4.23 Total: -1.00 -28.24 280.97 -4.77 -33.01 By element: Atomic # 1 Polarization: 6.46 SS G_CDS: -1.80 Total: 4.67 kcal Atomic # 6 Polarization: 18.33 SS G_CDS: -3.65 Total: 14.68 kcal Atomic # 7 Polarization: -57.97 SS G_CDS: 1.38 Total: -56.59 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: 0.08 Total: -13.38 kcal Atomic # 14 Polarization: 18.40 SS G_CDS: -5.02 Total: 13.38 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -28.24 -4.77 -33.01 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001542734864.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 173.747 kcal (2) G-P(sol) polarization free energy of solvation -28.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 145.507 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.775 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.014 kcal (6) G-S(sol) free energy of system = (1) + (5) 140.733 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds