Wall clock time and date at job start Mon Mar 30 2020 01:23:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 N 1.46499 * 109.47470 * 2 1 4 4 C 1.35640 * 124.92948 * 124.99930 * 3 2 1 5 5 C 1.35466 * 107.13095 * 180.02562 * 4 3 2 6 6 Cl 1.73595 * 127.23975 * 179.97438 * 5 4 3 7 7 C 1.41546 * 105.52074 * 359.97438 * 5 4 3 8 8 C 1.47671 * 126.46164 * 179.97438 * 7 5 4 9 9 O 1.21576 * 119.99695 * 0.02562 * 8 7 5 10 10 N 1.34777 * 120.00213 * 180.02562 * 8 7 5 11 11 C 1.46497 * 120.00376 * 179.97438 * 10 8 7 12 12 H 1.09002 * 109.46725 * 35.00314 * 11 10 8 13 13 C 1.52997 * 109.47188 * 275.00479 * 11 10 8 14 14 C 1.50697 * 109.47081 * 155.00043 * 11 10 8 15 15 H 1.07999 * 120.00055 * 0.02562 * 14 11 10 16 16 C 1.37878 * 119.99687 * 180.02562 * 14 11 10 17 17 N 1.31511 * 120.00458 * 359.97438 * 16 14 11 18 18 Si 1.86805 * 119.99926 * 180.02562 * 16 14 11 19 19 H 1.48500 * 109.47262 * 0.02562 * 18 16 14 20 20 H 1.48505 * 109.46882 * 119.99668 * 18 16 14 21 21 H 1.48493 * 109.47394 * 239.99732 * 18 16 14 22 22 N 1.28463 * 124.93724 * 305.32144 * 3 2 1 23 23 H 1.09002 * 109.46960 * 299.99416 * 1 2 3 24 24 H 1.09003 * 109.47569 * 59.98994 * 1 2 3 25 25 H 1.08997 * 109.47899 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46484 * 240.00350 * 2 1 3 27 27 H 1.08993 * 109.47044 * 120.01049 * 2 1 3 28 28 H 1.07999 * 126.44128 * 0.04020 * 4 3 2 29 29 H 0.97006 * 119.99702 * 0.02562 * 10 8 7 30 30 H 1.09002 * 109.47153 * 299.99573 * 13 11 10 31 31 H 1.09001 * 109.46832 * 179.97438 * 13 11 10 32 32 H 1.09004 * 109.47261 * 59.99745 * 13 11 10 33 33 H 0.96999 * 120.00480 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.8786 1.9007 0.9110 5 6 3.0843 3.1961 0.5721 6 17 4.0958 4.3474 1.3875 7 6 2.3009 3.4134 -0.5866 8 6 2.1845 4.6763 -1.3431 9 8 2.8001 5.6604 -0.9815 10 7 1.3958 4.7381 -2.4342 11 6 1.2798 5.9911 -3.1843 12 1 2.2368 6.5127 -3.1705 13 6 0.2086 6.8736 -2.5405 14 6 0.8926 5.6895 -4.6092 15 1 0.7470 4.6669 -4.9243 16 6 0.7242 6.7193 -5.5104 17 7 0.9010 7.9647 -5.1266 18 14 0.2436 6.3457 -7.2765 19 1 0.1050 4.8776 -7.4518 20 1 -1.0502 7.0050 -7.5874 21 1 1.2930 6.8574 -8.1940 22 7 1.6896 2.2778 -0.8593 23 1 -0.3633 0.5138 0.8901 24 1 -0.3634 0.5140 -0.8899 25 1 -0.3635 -1.0276 -0.0005 26 1 1.8932 -0.5138 -0.8901 27 1 1.8932 -0.5140 0.8898 28 1 3.3175 1.3796 1.7489 29 1 0.9043 3.9530 -2.7224 30 1 -0.7484 6.3521 -2.5544 31 1 0.1227 7.8061 -3.0984 32 1 0.4887 7.0917 -1.5099 33 1 0.7829 8.6891 -5.7607 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001543279332.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:23:04 Heat of formation + Delta-G solvation = 31.830605 kcal Electronic energy + Delta-G solvation = -18381.485936 eV Core-core repulsion = 15277.042210 eV Total energy + Delta-G solvation = -3104.443726 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.62674 -38.48771 -36.32896 -34.76123 -34.53509 -32.31811 -30.72210 -30.03275 -28.60951 -25.21063 -24.82461 -22.46514 -21.42403 -20.59740 -19.23082 -18.00501 -16.82225 -16.18512 -15.66334 -15.10921 -14.98591 -14.33569 -14.15271 -13.79871 -13.65205 -12.95970 -12.80912 -12.45778 -12.30021 -11.91114 -11.63195 -11.57626 -11.34164 -11.03598 -10.90881 -10.67182 -10.39681 -10.24589 -10.17189 -9.24935 -9.13970 -8.96227 -8.69432 -8.48951 -7.80448 -6.06120 -4.14573 1.70927 1.96964 2.04900 2.76186 3.28208 3.35659 3.39028 4.04565 4.06832 4.22761 4.42358 4.55760 4.62235 4.79901 4.99464 5.22850 5.26265 5.31415 5.44843 5.61028 5.81114 6.17010 6.61716 6.91167 7.05773 7.22593 7.52290 7.62582 7.74536 7.86531 8.01337 8.21429 8.76072 8.85284 9.18694 9.52515 11.00065 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020319 B = 0.005115 C = 0.004295 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1377.679650 B = 5472.428953 C = 6517.865650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.121 3.879 3 N -0.284 5.284 4 C -0.011 4.011 5 C -0.105 4.105 6 Cl -0.013 7.013 7 C 0.013 3.987 8 C 0.582 3.418 9 O -0.531 6.531 10 N -0.692 5.692 11 C 0.264 3.736 12 H 0.051 0.949 13 C -0.147 4.147 14 C -0.530 4.530 15 H 0.062 0.938 16 C 0.066 3.934 17 N -0.884 5.884 18 Si 0.901 3.099 19 H -0.273 1.273 20 H -0.283 1.283 21 H -0.283 1.283 22 N -0.247 5.247 23 H 0.063 0.937 24 H 0.077 0.923 25 H 0.079 0.921 26 H 0.095 0.905 27 H 0.103 0.897 28 H 0.187 0.813 29 H 0.394 0.606 30 H 0.026 0.974 31 H 0.091 0.909 32 H 0.016 0.984 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.019 -16.965 12.331 20.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C 0.001 3.999 3 N -0.073 5.073 4 C -0.155 4.155 5 C -0.142 4.142 6 Cl 0.015 6.985 7 C -0.150 4.150 8 C 0.363 3.637 9 O -0.407 6.407 10 N -0.340 5.340 11 C 0.162 3.838 12 H 0.069 0.931 13 C -0.205 4.205 14 C -0.569 4.569 15 H 0.080 0.920 16 C -0.137 4.137 17 N -0.521 5.521 18 Si 0.729 3.271 19 H -0.198 1.198 20 H -0.209 1.209 21 H -0.209 1.209 22 N -0.082 5.082 23 H 0.082 0.918 24 H 0.096 0.904 25 H 0.098 0.902 26 H 0.113 0.887 27 H 0.121 0.879 28 H 0.204 0.796 29 H 0.227 0.773 30 H 0.045 0.955 31 H 0.109 0.891 32 H 0.035 0.965 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 0.739 -16.559 11.793 20.343 hybrid contribution 0.142 -0.227 -0.365 0.453 sum 0.881 -16.787 11.428 20.326 Atomic orbital electron populations 1.22095 0.92935 1.03364 1.04309 1.22011 0.96806 0.76293 1.04773 1.45572 1.32369 1.10495 1.18905 1.22543 1.00028 0.93917 0.98986 1.20860 1.03160 0.91788 0.98440 1.98350 1.65562 1.57696 1.76864 1.22451 1.00274 0.94372 0.97867 1.16871 0.80953 0.84647 0.81180 1.90792 1.46651 1.34995 1.68254 1.46414 1.44754 1.16435 1.26371 1.18809 0.96633 0.79483 0.88845 0.93092 1.22077 0.97945 1.02851 0.97666 1.21256 1.48369 0.93493 0.93766 0.91990 1.24879 0.95002 0.94858 0.98974 1.69914 1.48660 0.98651 1.34910 0.86395 0.78095 0.78414 0.84198 1.19760 1.20913 1.20903 1.73621 1.21637 0.97542 1.15433 0.91778 0.90386 0.90228 0.88668 0.87898 0.79587 0.77291 0.95468 0.89086 0.96496 0.92677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.14 10.01 37.15 0.37 -0.77 16 2 C 0.12 0.81 7.12 -4.05 -0.03 0.78 16 3 N -0.28 -3.34 3.43 -61.15 -0.21 -3.55 16 4 C -0.01 -0.13 11.44 -16.86 -0.19 -0.32 16 5 C -0.10 -1.67 6.80 -39.31 -0.27 -1.93 16 6 Cl -0.01 -0.21 28.17 -51.86 -1.46 -1.67 16 7 C 0.01 0.23 7.13 -82.76 -0.59 -0.36 16 8 C 0.58 13.09 7.79 -12.41 -0.10 12.99 16 9 O -0.53 -13.46 15.54 5.30 0.08 -13.38 16 10 N -0.69 -15.88 5.07 -55.94 -0.28 -16.16 16 11 C 0.26 7.01 2.56 -69.09 -0.18 6.83 16 12 H 0.05 1.54 7.58 -51.93 -0.39 1.14 16 13 C -0.15 -3.79 9.26 37.16 0.34 -3.45 16 14 C -0.53 -14.52 8.73 -34.44 -0.30 -14.82 16 15 H 0.06 1.64 7.74 -52.49 -0.41 1.23 16 16 C 0.07 1.81 5.30 -17.82 -0.09 1.71 16 17 N -0.88 -25.35 11.32 55.43 0.63 -24.72 16 18 Si 0.90 21.06 29.54 -169.99 -5.02 16.04 16 19 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 20 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 21 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 22 N -0.25 -3.91 11.35 33.42 0.38 -3.53 16 23 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 24 H 0.08 0.70 8.08 -51.93 -0.42 0.28 16 25 H 0.08 0.34 8.14 -51.93 -0.42 -0.08 16 26 H 0.10 0.56 8.14 -51.93 -0.42 0.13 16 27 H 0.10 0.35 8.04 -51.93 -0.42 -0.07 16 28 H 0.19 1.32 8.06 -52.49 -0.42 0.90 16 29 H 0.39 8.27 8.26 -40.82 -0.34 7.93 16 30 H 0.03 0.65 8.14 -51.93 -0.42 0.23 16 31 H 0.09 2.52 6.07 -51.93 -0.32 2.20 16 32 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 33 H 0.26 7.13 8.31 -40.82 -0.34 6.79 16 LS Contribution 304.73 15.07 4.59 4.59 Total: -1.00 -32.91 304.73 -6.29 -39.20 By element: Atomic # 1 Polarization: 6.48 SS G_CDS: -3.96 Total: 2.52 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.03 Total: 0.67 kcal Atomic # 7 Polarization: -48.48 SS G_CDS: 0.51 Total: -47.96 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: 0.08 Total: -13.38 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -5.02 Total: 16.04 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.46 Total: -1.67 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -32.91 -6.29 -39.20 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001543279332.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.030 kcal (2) G-P(sol) polarization free energy of solvation -32.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.199 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds