Wall clock time and date at job start Mon Mar 30 2020 01:02:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35457 * 126.43690 * 2 1 4 4 Cl 1.73602 * 127.23383 * 359.96631 * 3 2 1 5 5 C 1.41543 * 105.52504 * 180.02562 * 3 2 1 6 6 C 1.47666 * 126.45983 * 180.02562 * 5 3 2 7 7 O 1.21573 * 120.00086 * 354.31498 * 6 5 3 8 8 N 1.34777 * 119.99785 * 174.04224 * 6 5 3 9 9 C 1.46496 * 120.00154 * 354.75651 * 8 6 5 10 10 C 1.46500 * 119.99781 * 174.76011 * 8 6 5 11 11 C 1.50695 * 109.47402 * 90.00111 * 10 8 6 12 12 H 1.08005 * 119.99804 * 359.97438 * 11 10 8 13 13 C 1.37877 * 120.00526 * 179.97438 * 11 10 8 14 14 N 1.31513 * 119.99589 * 359.97438 * 13 11 10 15 15 Si 1.86796 * 120.00392 * 179.97438 * 13 11 10 16 16 H 1.48502 * 109.47200 * 89.99682 * 15 13 11 17 17 H 1.48493 * 109.47250 * 210.00051 * 15 13 11 18 18 H 1.48502 * 109.47118 * 330.00050 * 15 13 11 19 19 N 1.31826 * 107.07782 * 0.26003 * 5 3 2 20 20 N 1.28476 * 110.13469 * 359.55885 * 19 5 3 21 21 C 1.46496 * 124.93322 * 180.21650 * 20 19 5 22 22 H 1.09001 * 109.47732 * 89.97532 * 1 2 3 23 23 H 1.09005 * 109.47501 * 209.97608 * 1 2 3 24 24 H 1.09006 * 109.47283 * 329.97457 * 1 2 3 25 25 H 1.09000 * 109.47353 * 85.30439 * 9 8 6 26 26 H 1.08996 * 109.47698 * 205.30331 * 9 8 6 27 27 H 1.09006 * 109.47419 * 325.30411 * 9 8 6 28 28 H 1.09007 * 109.46981 * 209.99579 * 10 8 6 29 29 H 1.08990 * 109.47531 * 329.99460 * 10 8 6 30 30 H 0.97002 * 120.00017 * 180.02562 * 14 13 11 31 31 H 1.09001 * 109.47031 * 270.27281 * 21 20 19 32 32 H 1.08999 * 109.47064 * 30.27932 * 21 20 19 33 33 H 1.09000 * 109.46744 * 150.27537 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3115 1.0898 0.0000 4 17 1.8234 2.7558 -0.0008 5 6 3.6337 0.5846 -0.0006 6 6 4.8774 1.3808 -0.0003 7 8 4.8244 2.5909 -0.1038 8 7 6.0708 0.7663 0.1202 9 6 6.1303 -0.6767 0.3659 10 6 7.3087 1.5414 0.0055 11 6 7.7141 2.0449 1.3668 12 1 7.1099 1.8112 2.2309 13 6 8.8563 2.8038 1.5092 14 7 9.5923 3.0880 0.4569 15 14 9.3585 3.4285 3.1964 16 1 10.2395 2.4290 3.8523 17 1 10.0892 4.7130 3.0514 18 1 8.1458 3.6399 4.0271 19 7 3.5456 -0.7307 -0.0066 20 7 2.3125 -1.0914 -0.0005 21 6 1.8445 -2.4796 0.0000 22 1 -0.3634 0.0004 -1.0276 23 1 -0.3634 -0.8902 0.5135 24 1 -0.3634 0.8898 0.5142 25 1 6.0747 -1.2095 -0.5834 26 1 7.0673 -0.9219 0.8658 27 1 5.2930 -0.9725 0.9982 28 1 8.0985 0.9073 -0.3974 29 1 7.1468 2.3880 -0.6616 30 1 10.3962 3.6216 0.5571 31 1 1.7275 -2.8240 -1.0275 32 1 2.5721 -3.1081 0.5134 33 1 0.8855 -2.5394 0.5147 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001631255080.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:02:36 Heat of formation + Delta-G solvation = 48.970184 kcal Electronic energy + Delta-G solvation = -18683.575600 eV Core-core repulsion = 15579.875102 eV Total energy + Delta-G solvation = -3103.700498 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.64801 -38.50966 -36.27997 -34.69112 -33.60557 -32.56526 -32.37744 -28.28990 -27.44994 -26.70564 -25.62474 -23.50307 -21.65040 -20.69746 -18.43469 -16.94382 -16.63135 -16.33679 -15.93701 -15.08476 -14.75010 -14.29221 -14.07953 -13.67267 -13.52353 -13.11548 -12.87105 -12.67510 -12.42654 -12.13552 -12.03427 -11.93808 -11.63537 -11.17750 -10.93815 -10.77917 -10.48267 -10.27929 -10.05760 -9.55071 -9.04629 -8.98531 -8.58011 -8.35537 -7.51277 -5.96108 -4.00089 1.69308 2.02496 2.06369 2.81132 3.36475 3.42768 3.48485 3.93569 4.09356 4.34549 4.45254 4.53174 4.73227 4.80964 4.99239 5.07982 5.24407 5.37251 5.45771 5.53983 5.63381 5.99282 6.13792 6.21969 6.43870 6.67848 7.16400 7.50978 7.63555 7.87637 8.01209 8.31647 8.49901 8.98073 9.16396 9.64407 11.11991 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.025724 B = 0.005270 C = 0.004736 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1088.195585 B = 5311.747082 C = 5910.639457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.016 3.984 3 C -0.105 4.105 4 Cl -0.012 7.012 5 C 0.019 3.981 6 C 0.581 3.419 7 O -0.516 6.516 8 N -0.587 5.587 9 C 0.091 3.909 10 C 0.247 3.753 11 C -0.522 4.522 12 H 0.058 0.942 13 C 0.061 3.939 14 N -0.896 5.896 15 Si 0.898 3.102 16 H -0.281 1.281 17 H -0.285 1.285 18 H -0.274 1.274 19 N -0.248 5.248 20 N -0.290 5.290 21 C 0.090 3.910 22 H 0.081 0.919 23 H 0.072 0.928 24 H 0.087 0.913 25 H 0.044 0.956 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.035 0.965 29 H 0.044 0.956 30 H 0.263 0.737 31 H 0.084 0.916 32 H 0.098 0.902 33 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.093 -12.589 -1.465 22.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.109 4.109 3 C -0.142 4.142 4 Cl 0.017 6.983 5 C -0.143 4.143 6 C 0.364 3.636 7 O -0.390 6.390 8 N -0.319 5.319 9 C -0.053 4.053 10 C 0.128 3.872 11 C -0.561 4.561 12 H 0.076 0.924 13 C -0.141 4.141 14 N -0.536 5.536 15 Si 0.726 3.274 16 H -0.207 1.207 17 H -0.211 1.211 18 H -0.199 1.199 19 N -0.082 5.082 20 N -0.078 5.078 21 C -0.050 4.050 22 H 0.099 0.901 23 H 0.091 0.909 24 H 0.106 0.894 25 H 0.062 0.938 26 H 0.087 0.913 27 H 0.086 0.914 28 H 0.053 0.947 29 H 0.062 0.938 30 H 0.072 0.928 31 H 0.103 0.897 32 H 0.117 0.883 33 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -18.345 -12.799 -1.587 22.425 hybrid contribution -0.120 0.976 0.931 1.354 sum -18.464 -11.823 -0.656 21.935 Atomic orbital electron populations 1.20355 0.86201 1.03983 1.03454 1.21018 0.95146 0.86026 1.08682 1.20532 0.92292 0.87504 1.13903 1.98344 1.90753 1.12111 1.97126 1.22379 0.94984 0.89203 1.07724 1.16820 0.81337 0.86364 0.79034 1.90809 1.85688 1.12422 1.50072 1.48019 1.06910 1.08743 1.68224 1.21739 1.02307 0.81062 1.00206 1.19344 0.78678 0.91371 0.97808 1.21438 1.08248 1.32692 0.93724 0.92407 1.24921 0.96298 0.95866 0.97010 1.69935 1.15762 1.38935 1.28923 0.86495 0.78514 0.78237 0.84183 1.20715 1.21109 1.19869 1.73970 1.00618 1.14061 1.19588 1.45387 1.03073 1.07037 1.52321 1.22133 1.01574 0.76900 1.04402 0.90088 0.90932 0.89442 0.93788 0.91282 0.91364 0.94730 0.93757 0.92786 0.89708 0.88288 0.88813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.62 9.99 36.01 0.36 -0.26 16 2 C 0.02 0.21 6.94 -81.90 -0.57 -0.36 16 3 C -0.10 -1.77 6.79 -39.32 -0.27 -2.04 16 4 Cl -0.01 -0.20 27.94 -51.86 -1.45 -1.65 16 5 C 0.02 0.37 6.75 -82.76 -0.56 -0.19 16 6 C 0.58 13.81 7.66 -12.41 -0.10 13.72 16 7 O -0.52 -13.96 15.53 5.30 0.08 -13.88 16 8 N -0.59 -13.87 2.86 -184.15 -0.53 -14.40 16 9 C 0.09 1.70 9.33 59.84 0.56 2.26 16 10 C 0.25 6.79 5.10 -5.20 -0.03 6.77 16 11 C -0.52 -15.43 9.39 -34.44 -0.32 -15.75 16 12 H 0.06 1.72 7.81 -52.48 -0.41 1.31 16 13 C 0.06 1.79 5.46 -17.82 -0.10 1.69 16 14 N -0.90 -27.28 13.29 55.43 0.74 -26.55 16 15 Si 0.90 22.54 29.54 -169.99 -5.02 17.52 16 16 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 17 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 18 H -0.27 -6.89 7.11 56.52 0.40 -6.49 16 19 N -0.25 -3.99 8.73 33.42 0.29 -3.70 16 20 N -0.29 -3.53 3.72 -63.68 -0.24 -3.76 16 21 C 0.09 0.55 11.12 59.84 0.67 1.22 16 22 H 0.08 0.52 8.14 -51.93 -0.42 0.09 16 23 H 0.07 0.36 7.03 -51.93 -0.36 -0.01 16 24 H 0.09 0.67 8.03 -51.93 -0.42 0.26 16 25 H 0.04 0.74 8.14 -51.93 -0.42 0.32 16 26 H 0.07 1.27 8.04 -51.93 -0.42 0.86 16 27 H 0.07 1.20 5.89 -51.93 -0.31 0.89 16 28 H 0.03 0.95 8.07 -51.93 -0.42 0.53 16 29 H 0.04 1.35 7.50 -51.93 -0.39 0.96 16 30 H 0.26 7.53 8.31 -40.82 -0.34 7.19 16 31 H 0.08 0.39 8.14 -51.93 -0.42 -0.03 16 32 H 0.10 0.54 8.14 -51.93 -0.42 0.12 16 33 H 0.09 0.31 6.98 -51.93 -0.36 -0.05 16 LS Contribution 301.67 15.07 4.55 4.55 Total: -1.00 -36.14 301.67 -5.84 -41.98 By element: Atomic # 1 Polarization: -3.24 SS G_CDS: -3.91 Total: -7.15 kcal Atomic # 6 Polarization: 7.40 SS G_CDS: -0.35 Total: 7.04 kcal Atomic # 7 Polarization: -48.68 SS G_CDS: 0.27 Total: -48.41 kcal Atomic # 8 Polarization: -13.96 SS G_CDS: 0.08 Total: -13.88 kcal Atomic # 14 Polarization: 22.54 SS G_CDS: -5.02 Total: 17.52 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.45 Total: -1.65 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -36.14 -5.84 -41.98 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001631255080.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.948 kcal (2) G-P(sol) polarization free energy of solvation -36.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.978 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds