Wall clock time and date at job start Mon Mar 30 2020 00:58:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43206 * 179.97438 * 2 1 4 4 N 1.33207 * 120.08129 * 215.21892 * 3 2 1 5 5 C 1.31564 * 120.08847 * 180.02562 * 4 3 2 6 6 C 1.39973 * 120.25559 * 0.02562 * 5 4 3 7 7 N 1.38588 * 119.91487 * 179.97438 * 6 5 4 8 8 C 1.47482 * 111.00100 * 275.96698 * 7 6 5 9 9 C 1.53504 * 87.93690 * 221.29805 * 8 7 6 10 10 O 1.42905 * 114.17151 * 272.37830 * 9 8 7 11 11 C 1.50698 * 114.17571 * 139.66950 * 9 8 7 12 12 H 1.08002 * 120.00137 * 266.16491 * 11 9 8 13 13 C 1.37879 * 119.99791 * 86.15967 * 11 9 8 14 14 N 1.31511 * 120.00066 * 359.97438 * 13 11 9 15 15 Si 1.86800 * 120.00249 * 180.02562 * 13 11 9 16 16 H 1.48501 * 109.47468 * 89.99344 * 15 13 11 17 17 H 1.48497 * 109.47377 * 210.00084 * 15 13 11 18 18 H 1.48508 * 109.46599 * 329.99541 * 15 13 11 19 19 C 1.47481 * 110.99970 * 179.97438 * 7 6 5 20 20 N 1.32474 * 120.17125 * 0.02562 * 6 5 4 21 21 C 1.33027 * 119.90919 * 359.97438 * 20 6 5 22 22 C 1.43199 * 120.13094 * 179.97438 * 21 20 6 23 23 N 3.55111 * 104.03164 * 35.24340 * 2 1 3 24 24 H 1.07998 * 119.87353 * 179.72242 * 5 4 3 25 25 H 1.09009 * 113.47582 * 336.06954 * 8 7 6 26 26 H 1.09008 * 113.47623 * 106.52721 * 8 7 6 27 27 H 0.96697 * 113.99815 * 273.84318 * 10 9 8 28 28 H 0.97004 * 120.00279 * 179.97438 * 14 13 11 29 29 H 1.09000 * 113.47525 * 253.46715 * 19 7 6 30 30 H 1.08999 * 113.47643 * 23.93761 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2352 0.9426 0.6647 5 6 4.5509 0.9436 0.6644 6 6 5.2567 -0.0431 -0.0337 7 7 6.6426 -0.0350 -0.0297 8 6 7.1688 0.8752 -1.0640 9 6 8.2321 -0.1863 -1.3784 10 8 9.4137 -0.0852 -0.5811 11 6 8.5155 -0.3594 -2.8484 12 1 7.9934 -1.1174 -3.4134 13 6 9.4414 0.4499 -3.4718 14 7 10.0768 1.3733 -2.7839 15 14 9.7924 0.2360 -5.2941 16 1 8.8758 1.1008 -6.0797 17 1 11.1988 0.6205 -5.5758 18 1 9.5815 -1.1838 -5.6753 19 6 7.1799 -1.1567 -0.8222 20 7 4.6035 -0.9841 -0.6990 21 6 3.2732 -0.9915 -0.7032 22 6 2.5623 -2.0062 -1.4213 23 7 1.9969 -2.8137 -1.9880 24 1 5.0883 1.7116 1.2008 25 1 6.4725 1.0489 -1.8846 26 1 7.5834 1.7987 -0.6595 27 1 10.0746 0.5265 -0.9333 28 1 10.7285 1.9425 -3.2224 29 1 7.6041 -1.9549 -0.2130 30 1 6.4868 -1.5255 -1.5782 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001655392216.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:58:57 Heat of formation + Delta-G solvation = 125.963402 kcal Electronic energy + Delta-G solvation = -19380.993455 eV Core-core repulsion = 16179.524140 eV Total energy + Delta-G solvation = -3201.469315 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.91732 -39.59409 -37.09269 -36.82489 -35.13755 -34.26491 -32.30252 -31.96482 -28.35074 -26.51097 -25.78622 -25.03243 -23.32902 -20.18790 -19.60685 -19.14450 -18.20588 -17.62470 -16.05969 -15.93196 -15.26870 -15.06095 -14.65519 -14.22215 -13.83937 -13.73620 -13.52284 -13.46489 -13.30617 -13.11773 -12.92280 -12.50021 -12.29457 -11.97995 -11.59606 -11.37904 -11.15581 -11.04689 -10.58737 -10.37036 -9.96927 -9.72339 -9.54123 -8.88368 -8.68032 -8.27272 -6.48048 -4.57864 -0.31564 0.45066 2.01456 2.15719 2.31871 2.65714 2.80191 3.09705 3.12520 3.18782 3.22230 3.50302 3.67510 4.02730 4.11430 4.36802 4.53971 4.76770 4.84172 5.30896 5.63207 5.67108 5.88103 5.93861 6.33174 6.41200 6.60628 6.67661 6.96241 7.01626 7.05622 7.19514 7.38215 7.56084 7.72726 8.46042 9.13569 9.41557 10.58424 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.024464 B = 0.004911 C = 0.004494 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1144.254971 B = 5700.510686 C = 6229.185647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.372 5.372 2 C 0.267 3.733 3 C 0.144 3.856 4 N -0.384 5.384 5 C 0.096 3.904 6 C 0.289 3.711 7 N -0.423 5.423 8 C -0.006 4.006 9 C 0.252 3.748 10 O -0.567 6.567 11 C -0.536 4.536 12 H 0.072 0.928 13 C 0.074 3.926 14 N -0.896 5.896 15 Si 0.906 3.094 16 H -0.277 1.277 17 H -0.282 1.282 18 H -0.270 1.270 19 C 0.011 3.989 20 N -0.439 5.439 21 C 0.229 3.771 22 C 0.258 3.742 23 N -0.357 5.357 24 H 0.197 0.803 25 H 0.075 0.925 26 H 0.089 0.911 27 H 0.394 0.606 28 H 0.275 0.725 29 H 0.083 0.917 30 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.433 1.035 4.691 8.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.049 5.049 2 C -0.051 4.051 3 C 0.002 3.998 4 N -0.098 5.098 5 C -0.074 4.074 6 C 0.050 3.950 7 N -0.142 5.142 8 C -0.131 4.131 9 C 0.210 3.790 10 O -0.380 6.380 11 C -0.574 4.574 12 H 0.090 0.910 13 C -0.129 4.129 14 N -0.536 5.536 15 Si 0.733 3.267 16 H -0.203 1.203 17 H -0.208 1.208 18 H -0.195 1.195 19 C -0.116 4.116 20 N -0.159 5.159 21 C 0.083 3.917 22 C -0.061 4.061 23 N -0.034 5.034 24 H 0.213 0.787 25 H 0.093 0.907 26 H 0.107 0.893 27 H 0.250 0.750 28 H 0.085 0.915 29 H 0.102 0.898 30 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -9.016 -0.390 4.864 10.252 hybrid contribution 0.919 0.641 -1.625 1.973 sum -8.098 0.251 3.239 8.725 Atomic orbital electron populations 1.81260 1.11019 1.06138 1.06486 1.24515 0.91145 0.94703 0.94740 1.16773 0.87150 0.94992 1.00868 1.68407 1.09058 1.19236 1.13109 1.23799 0.88354 0.98508 0.96780 1.22274 0.95206 0.88967 0.88504 1.66489 0.98279 1.11445 1.37940 1.25147 0.99066 0.99573 0.89358 1.19369 0.82534 0.87743 0.89389 1.86058 1.29729 1.69414 1.52750 1.21508 1.23790 1.19089 0.93028 0.91002 1.25063 0.94588 0.93803 0.99433 1.69256 1.26727 1.20562 1.37086 0.86353 0.77817 0.78954 0.83596 1.20303 1.20763 1.19461 1.24301 0.96761 0.94721 0.95809 1.68648 1.05394 1.25635 1.16226 1.16878 0.89355 0.90744 0.94690 1.24666 0.93852 0.93218 0.94326 1.81306 1.07979 1.07621 1.06469 0.78669 0.90716 0.89254 0.74970 0.91495 0.89836 0.88010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.37 -5.18 18.54 41.83 0.78 -4.40 16 2 C 0.27 3.36 14.61 -22.47 -0.33 3.03 16 3 C 0.14 1.73 6.62 -84.46 -0.56 1.17 16 4 N -0.38 -4.49 10.41 -10.41 -0.11 -4.60 16 5 C 0.10 1.09 11.14 -17.02 -0.19 0.90 16 6 C 0.29 4.06 5.84 -155.04 -0.91 3.16 16 7 N -0.42 -7.03 6.41 -182.35 -1.17 -8.20 16 8 C -0.01 -0.12 7.07 -7.50 -0.05 -0.17 16 9 C 0.25 5.47 1.57 -91.22 -0.14 5.32 16 10 O -0.57 -13.28 13.54 -35.23 -0.48 -13.76 16 11 C -0.54 -12.70 8.69 -34.44 -0.30 -13.00 16 12 H 0.07 1.69 7.81 -52.49 -0.41 1.28 16 13 C 0.07 1.75 5.40 -17.82 -0.10 1.66 16 14 N -0.90 -21.45 11.02 55.43 0.61 -20.84 16 15 Si 0.91 18.77 29.54 -169.99 -5.02 13.75 16 16 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 17 H -0.28 -5.85 7.11 56.52 0.40 -5.44 16 18 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 19 C 0.01 0.22 6.80 -7.47 -0.05 0.16 16 20 N -0.44 -6.34 8.27 -9.88 -0.08 -6.42 16 21 C 0.23 2.94 6.61 -84.54 -0.56 2.38 16 22 C 0.26 3.50 14.62 -22.44 -0.33 3.17 16 23 N -0.36 -5.31 18.54 41.88 0.78 -4.54 16 24 H 0.20 1.69 8.06 -52.49 -0.42 1.27 16 25 H 0.07 1.36 7.85 -51.92 -0.41 0.95 16 26 H 0.09 1.64 8.14 -51.92 -0.42 1.21 16 27 H 0.39 9.47 6.34 45.56 0.29 9.75 16 28 H 0.27 6.28 8.31 -40.82 -0.34 5.94 16 29 H 0.08 1.56 8.14 -51.93 -0.42 1.13 16 30 H 0.10 1.87 6.62 -51.93 -0.34 1.53 16 LS Contribution 287.82 15.07 4.34 4.34 Total: -1.00 -24.68 287.82 -5.14 -29.82 By element: Atomic # 1 Polarization: 8.33 SS G_CDS: -1.28 Total: 7.06 kcal Atomic # 6 Polarization: 11.29 SS G_CDS: -3.51 Total: 7.78 kcal Atomic # 7 Polarization: -49.79 SS G_CDS: 0.80 Total: -48.99 kcal Atomic # 8 Polarization: -13.28 SS G_CDS: -0.48 Total: -13.76 kcal Atomic # 14 Polarization: 18.77 SS G_CDS: -5.02 Total: 13.75 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -24.68 -5.14 -29.82 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001655392216.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 155.787 kcal (2) G-P(sol) polarization free energy of solvation -24.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.824 kcal (6) G-S(sol) free energy of system = (1) + (5) 125.963 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds