Wall clock time and date at job start Mon Mar 30 2020 01:21:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09003 * 109.46838 * 2 1 4 4 C 1.53001 * 109.47188 * 119.99484 * 2 1 3 5 5 N 1.46496 * 109.47050 * 175.00153 * 4 2 1 6 6 C 1.36940 * 119.99981 * 179.97438 * 5 4 2 7 7 H 1.07998 * 119.99801 * 0.02562 * 6 5 4 8 8 C 1.38813 * 119.99940 * 179.97438 * 6 5 4 9 9 N 1.31618 * 120.00181 * 0.02562 * 8 6 5 10 10 Si 1.86802 * 119.99960 * 179.97438 * 8 6 5 11 11 H 1.48504 * 109.46885 * 90.00512 * 10 8 6 12 12 H 1.48497 * 109.47319 * 210.00611 * 10 8 6 13 13 H 1.48505 * 109.47085 * 330.00611 * 10 8 6 14 14 N 1.46491 * 109.47181 * 239.99917 * 2 1 3 15 15 C 1.34775 * 120.00524 * 84.99489 * 14 2 1 16 16 O 1.21701 * 119.99766 * 0.02562 * 15 14 2 17 17 C 1.46669 * 120.00542 * 179.97438 * 15 14 2 18 18 C 1.37894 * 126.22597 * 180.02562 * 17 15 14 19 19 C 1.39885 * 107.09352 * 180.23476 * 18 17 15 20 20 Cl 1.73604 * 126.07262 * 179.75548 * 19 18 17 21 21 C 1.35517 * 107.85386 * 359.62480 * 19 18 17 22 22 N 1.35627 * 108.85051 * 0.38061 * 21 19 18 23 23 H 0.97003 * 125.67840 * 179.75994 * 22 21 19 24 24 H 1.09002 * 109.47018 * 180.02562 * 1 2 3 25 25 H 1.08999 * 109.47275 * 300.00370 * 1 2 3 26 26 H 1.08997 * 109.47220 * 60.00496 * 1 2 3 27 27 H 1.09002 * 109.47210 * 295.00174 * 4 2 1 28 28 H 1.09001 * 109.46861 * 55.00276 * 4 2 1 29 29 H 0.97001 * 120.00044 * 0.02562 * 5 4 2 30 30 H 0.96999 * 120.00081 * 179.97438 * 9 8 6 31 31 H 0.97005 * 120.00010 * 265.00175 * 14 2 1 32 32 H 1.08002 * 126.44873 * 359.96391 * 18 17 15 33 33 H 1.08000 * 125.57702 * 180.14836 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0401 -0.7211 1.2493 5 7 3.5001 -0.8262 1.1906 6 6 4.1839 -1.4377 2.2073 7 1 3.6469 -1.8428 3.0522 8 6 5.5673 -1.5377 2.1515 9 7 6.2218 -1.0444 1.1216 10 14 6.5003 -2.3711 3.5387 11 1 6.6320 -3.8210 3.2456 12 1 7.8509 -1.7660 3.6606 13 1 5.7595 -2.1891 4.8129 14 7 2.0184 -0.6906 -1.1961 15 6 2.1470 -0.0184 -2.3571 16 8 1.8579 1.1625 -2.4118 17 6 2.6365 -0.7097 -3.5545 18 6 2.8171 -0.1502 -4.8018 19 6 3.2906 -1.1633 -5.6422 20 17 3.6773 -0.9969 -7.3265 21 6 3.3967 -2.2970 -4.9074 22 7 2.9988 -2.0349 -3.6375 23 1 2.9738 -2.6749 -2.9090 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5137 -0.8900 27 1 1.7517 -0.1581 2.1370 28 1 1.6055 -1.7197 1.2952 29 1 3.9824 -0.4620 0.4320 30 1 7.1885 -1.1140 1.0827 31 1 2.2490 -1.6318 -1.1525 32 1 2.6247 0.8758 -5.0789 33 1 3.7382 -3.2537 -5.2740 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001669505739.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:21:48 Heat of formation + Delta-G solvation = 7.627666 kcal Electronic energy + Delta-G solvation = -18212.352326 eV Core-core repulsion = 15106.859082 eV Total energy + Delta-G solvation = -3105.493244 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.38366 -39.12021 -36.42603 -36.21389 -33.75469 -31.73445 -30.87394 -30.19219 -28.87745 -25.77021 -23.47458 -22.53562 -21.07411 -20.31290 -20.15944 -18.97247 -17.17621 -16.11952 -15.69319 -15.18718 -14.77289 -14.51454 -14.06698 -13.80257 -13.64087 -13.40459 -13.27897 -12.93191 -12.44630 -12.29353 -12.20379 -11.87463 -11.68283 -10.98325 -10.90646 -10.88779 -10.54230 -10.13509 -9.91445 -9.82602 -9.01511 -8.96379 -8.86105 -8.29817 -7.05581 -5.86181 -3.16947 1.41895 2.14056 2.41400 3.06004 3.35772 3.39110 3.42457 3.44193 3.50359 4.49703 4.83652 4.91483 5.11762 5.20869 5.40040 5.45632 5.55874 5.60059 5.84182 5.92878 6.01114 6.10319 6.31283 6.36065 6.37814 6.56491 6.59651 6.82294 7.14492 7.60171 7.70302 8.31103 8.35218 9.43175 9.98187 10.33489 11.35819 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.017892 B = 0.004641 C = 0.003878 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1564.597929 B = 6032.354324 C = 7219.183504 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.134 3.866 3 H 0.090 0.910 4 C 0.144 3.856 5 N -0.733 5.733 6 C -0.246 4.246 7 H 0.071 0.929 8 C -0.010 4.010 9 N -0.930 5.930 10 Si 0.908 3.092 11 H -0.290 1.290 12 H -0.291 1.291 13 H -0.281 1.281 14 N -0.709 5.709 15 C 0.589 3.411 16 O -0.532 6.532 17 C -0.029 4.029 18 C -0.101 4.101 19 C -0.128 4.128 20 Cl -0.053 7.053 21 C 0.039 3.961 22 N -0.525 5.525 23 H 0.426 0.574 24 H 0.055 0.945 25 H 0.067 0.933 26 H 0.058 0.942 27 H 0.036 0.964 28 H 0.024 0.976 29 H 0.386 0.614 30 H 0.256 0.744 31 H 0.398 0.602 32 H 0.156 0.844 33 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.249 -3.557 -11.883 15.472 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.030 3.970 3 H 0.108 0.892 4 C 0.016 3.984 5 N -0.378 5.378 6 C -0.377 4.377 7 H 0.089 0.911 8 C -0.207 4.207 9 N -0.578 5.578 10 Si 0.739 3.261 11 H -0.217 1.217 12 H -0.217 1.217 13 H -0.207 1.207 14 N -0.359 5.359 15 C 0.376 3.624 16 O -0.409 6.409 17 C -0.143 4.143 18 C -0.127 4.127 19 C -0.161 4.161 20 Cl -0.025 7.025 21 C -0.099 4.099 22 N -0.122 5.122 23 H 0.265 0.735 24 H 0.074 0.926 25 H 0.086 0.914 26 H 0.077 0.923 27 H 0.054 0.946 28 H 0.042 0.958 29 H 0.220 0.780 30 H 0.066 0.934 31 H 0.232 0.768 32 H 0.173 0.827 33 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -9.411 -2.832 -11.703 15.283 hybrid contribution 1.049 -1.174 0.703 1.725 sum -8.362 -4.006 -11.001 14.387 Atomic orbital electron populations 1.22108 0.95256 1.01906 1.02389 1.21303 0.93489 0.98145 0.84106 0.89155 1.20998 0.86882 0.96956 0.93605 1.42375 0.99708 1.70361 1.25330 1.19216 0.89452 1.29736 0.99330 0.91093 1.24762 0.96434 1.01418 0.98075 1.69667 1.07359 1.50527 1.30256 0.86188 0.79459 0.78901 0.81580 1.21720 1.21702 1.20697 1.45864 1.66649 1.13977 1.09424 1.16927 0.77630 0.86208 0.81642 1.90830 1.50953 1.14583 1.84521 1.20479 1.13007 0.84242 0.96553 1.21115 1.02137 0.99553 0.89924 1.19904 1.13791 0.95531 0.86864 1.98315 1.93368 1.97916 1.12906 1.21704 1.04756 0.99753 0.83693 1.41962 1.49639 1.09940 1.10624 0.73451 0.92610 0.91438 0.92259 0.94638 0.95814 0.78017 0.93395 0.76838 0.82652 0.80365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.06 9.48 37.16 0.35 -1.70 16 2 C 0.13 2.16 2.73 -67.93 -0.19 1.97 16 3 H 0.09 1.66 7.58 -51.93 -0.39 1.27 16 4 C 0.14 2.67 5.82 -4.04 -0.02 2.64 16 5 N -0.73 -17.54 5.43 -59.91 -0.33 -17.87 16 6 C -0.25 -6.60 9.99 -15.06 -0.15 -6.75 16 7 H 0.07 1.84 7.83 -52.49 -0.41 1.43 16 8 C -0.01 -0.29 5.50 -17.43 -0.10 -0.39 16 9 N -0.93 -27.43 13.06 55.49 0.72 -26.70 16 10 Si 0.91 21.75 29.55 -169.99 -5.02 16.73 16 11 H -0.29 -6.87 7.11 56.52 0.40 -6.46 16 12 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 13 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 14 N -0.71 -10.86 4.51 -55.12 -0.25 -11.11 16 15 C 0.59 9.76 7.75 -12.86 -0.10 9.66 16 16 O -0.53 -10.41 16.55 5.19 0.09 -10.33 16 17 C -0.03 -0.41 7.05 -81.98 -0.58 -0.99 16 18 C -0.10 -1.42 10.65 -39.09 -0.42 -1.83 16 19 C -0.13 -1.58 6.66 -39.94 -0.27 -1.84 16 20 Cl -0.05 -0.60 29.30 -51.86 -1.52 -2.12 16 21 C 0.04 0.41 11.87 -16.85 -0.20 0.21 16 22 N -0.53 -5.88 6.00 -9.35 -0.06 -5.94 16 23 H 0.43 3.84 8.19 -40.82 -0.33 3.51 16 24 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 25 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 26 H 0.06 0.81 8.14 -51.93 -0.42 0.38 16 27 H 0.04 0.67 8.14 -51.93 -0.42 0.24 16 28 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 29 H 0.39 9.94 7.33 -40.82 -0.30 9.64 16 30 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 31 H 0.40 5.51 7.73 -40.82 -0.32 5.20 16 32 H 0.16 2.15 8.06 -52.49 -0.42 1.72 16 33 H 0.18 1.28 8.06 -52.49 -0.42 0.85 16 LS Contribution 307.03 15.07 4.63 4.63 Total: -1.00 -31.95 307.03 -7.25 -39.20 By element: Atomic # 1 Polarization: 16.39 SS G_CDS: -3.85 Total: 12.54 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -1.66 Total: 0.97 kcal Atomic # 7 Polarization: -61.72 SS G_CDS: 0.09 Total: -61.62 kcal Atomic # 8 Polarization: -10.41 SS G_CDS: 0.09 Total: -10.33 kcal Atomic # 14 Polarization: 21.75 SS G_CDS: -5.02 Total: 16.73 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.52 Total: -2.12 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -31.95 -7.25 -39.20 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001669505739.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.829 kcal (2) G-P(sol) polarization free energy of solvation -31.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.202 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.628 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds