Wall clock time and date at job start Mon Mar 30 2020 01:30:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.46495 * 120.00378 * 2 1 4 4 C 1.53001 * 109.47493 * 90.00154 * 3 2 1 5 5 N 1.46495 * 109.47433 * 180.02562 * 4 3 2 6 6 C 1.36940 * 119.99911 * 179.97438 * 5 4 3 7 7 H 1.07996 * 120.00020 * 359.97438 * 6 5 4 8 8 C 1.38813 * 119.99785 * 179.97438 * 6 5 4 9 9 N 1.31612 * 120.00116 * 179.97438 * 8 6 5 10 10 Si 1.86802 * 120.00036 * 359.97438 * 8 6 5 11 11 H 1.48499 * 109.46987 * 90.00304 * 10 8 6 12 12 H 1.48500 * 109.47322 * 210.00047 * 10 8 6 13 13 H 1.48494 * 109.47384 * 330.00413 * 10 8 6 14 14 C 1.34781 * 119.99768 * 179.97438 * 2 1 3 15 15 O 1.21710 * 120.00083 * 186.23004 * 14 2 1 16 16 C 1.46550 * 119.99763 * 6.23027 * 14 2 1 17 17 C 1.37930 * 126.23010 * 187.94250 * 16 14 2 18 18 C 1.39752 * 107.12161 * 179.97438 * 17 16 14 19 19 C 1.35654 * 107.88561 * 0.02562 * 18 17 16 20 20 Cl 1.73601 * 125.57573 * 180.02562 * 19 18 17 21 21 N 1.35581 * 108.85027 * 359.76869 * 19 18 17 22 22 H 0.96994 * 125.69859 * 180.23512 * 21 19 18 23 23 H 1.09000 * 109.47556 * 95.79997 * 1 2 3 24 24 H 1.08995 * 109.47728 * 215.80585 * 1 2 3 25 25 H 1.09004 * 109.47027 * 335.80341 * 1 2 3 26 26 H 1.09003 * 109.47344 * 209.99949 * 3 2 1 27 27 H 1.09001 * 109.47119 * 329.99515 * 3 2 1 28 28 H 1.09003 * 109.46657 * 300.00215 * 4 3 2 29 29 H 1.08998 * 109.46978 * 59.99714 * 4 3 2 30 30 H 0.97001 * 119.99965 * 359.97438 * 5 4 3 31 31 H 0.97002 * 120.00632 * 179.97438 * 9 8 6 32 32 H 1.07998 * 126.44228 * 359.96849 * 17 16 14 33 33 H 1.08005 * 126.05567 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2686 0.0000 4 6 2.4526 1.7104 1.4425 5 7 3.1846 2.9793 1.4425 6 6 3.5265 3.5725 2.6284 7 1 3.2561 3.1051 3.5637 8 6 4.2206 4.7747 2.6284 9 7 4.5487 5.3452 3.7681 10 14 4.6889 5.5827 1.0106 11 1 3.6006 6.4970 0.5806 12 1 5.9438 6.3565 1.1887 13 1 4.8946 4.5373 -0.0237 14 6 2.1388 -1.1673 0.0005 15 8 3.3505 -1.1704 0.1149 16 6 1.4124 -2.4327 -0.1367 17 6 1.9454 -3.6975 -0.0001 18 6 0.9055 -4.6071 -0.2106 19 6 -0.2223 -3.8984 -0.4676 20 17 -1.7873 -4.5744 -0.7956 21 7 0.0714 -2.5756 -0.4209 22 1 -0.5569 -1.8508 -0.5652 23 1 -0.3634 -0.1038 -1.0224 24 1 -0.3634 -0.8334 0.6012 25 1 -0.3633 0.9374 0.4212 26 1 3.1499 1.1383 -0.5138 27 1 1.6085 2.0283 -0.5139 28 1 1.5002 1.8407 1.9563 29 1 3.0416 0.9507 1.9563 30 1 3.4272 3.3993 0.6024 31 1 5.0341 6.1850 3.7682 32 1 2.9731 -3.9395 0.2268 33 1 0.9855 -5.6836 -0.1750 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001691467036.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:29 Heat of formation + Delta-G solvation = 42.908321 kcal Electronic energy + Delta-G solvation = -18058.331165 eV Core-core repulsion = 14954.367805 eV Total energy + Delta-G solvation = -3103.963360 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -41.81083 -39.36338 -37.10092 -36.24708 -34.66756 -31.99364 -31.36459 -29.79544 -28.43056 -26.90594 -24.12105 -22.09464 -21.45773 -20.96743 -20.47707 -18.12248 -17.62941 -16.67334 -16.11615 -15.80490 -14.73925 -14.52998 -14.46281 -14.06172 -13.73584 -13.56784 -13.36253 -13.30769 -12.94709 -12.70018 -12.47744 -12.09998 -11.65303 -11.63734 -11.20361 -11.15135 -10.78290 -10.20038 -10.13961 -9.61044 -9.46878 -8.91180 -8.84604 -8.46087 -7.26283 -5.77100 -3.13822 1.06811 1.23947 2.24106 2.70165 2.95003 3.20347 3.37325 3.40079 3.45472 4.27290 4.57223 4.58820 4.82948 4.86498 4.93181 5.20747 5.29707 5.48452 5.54584 5.55539 5.67004 5.76356 5.84748 6.11932 6.29275 6.42601 6.57008 6.73404 6.76793 7.20175 7.96499 8.01813 8.40928 9.19160 9.91147 10.10035 11.41199 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.044555 B = 0.003369 C = 0.003298 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 628.284513 B = 8308.979967 C = 8487.072706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.611 5.611 3 C 0.106 3.894 4 C 0.145 3.855 5 N -0.753 5.753 6 C -0.244 4.244 7 H 0.090 0.910 8 C 0.005 3.995 9 N -0.934 5.934 10 Si 0.886 3.114 11 H -0.284 1.284 12 H -0.290 1.290 13 H -0.276 1.276 14 C 0.585 3.415 15 O -0.510 6.510 16 C -0.026 4.026 17 C -0.100 4.100 18 C -0.176 4.176 19 C 0.078 3.922 20 Cl -0.019 7.019 21 N -0.538 5.538 22 H 0.424 0.576 23 H 0.058 0.942 24 H 0.070 0.930 25 H 0.094 0.906 26 H 0.087 0.913 27 H 0.080 0.920 28 H 0.026 0.974 29 H 0.034 0.966 30 H 0.361 0.639 31 H 0.260 0.740 32 H 0.159 0.841 33 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.510 -19.542 -12.205 27.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.345 5.345 3 C -0.016 4.016 4 C 0.017 3.983 5 N -0.399 5.399 6 C -0.374 4.374 7 H 0.108 0.892 8 C -0.191 4.191 9 N -0.581 5.581 10 Si 0.716 3.284 11 H -0.211 1.211 12 H -0.216 1.216 13 H -0.202 1.202 14 C 0.373 3.627 15 O -0.385 6.385 16 C -0.139 4.139 17 C -0.127 4.127 18 C -0.202 4.202 19 C -0.065 4.065 20 Cl 0.010 6.990 21 N -0.146 5.146 22 H 0.270 0.730 23 H 0.076 0.924 24 H 0.089 0.911 25 H 0.113 0.887 26 H 0.106 0.894 27 H 0.098 0.902 28 H 0.044 0.956 29 H 0.052 0.948 30 H 0.193 0.807 31 H 0.070 0.930 32 H 0.177 0.823 33 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -14.063 -19.368 -11.947 26.751 hybrid contribution -0.336 0.966 -1.134 1.527 sum -14.399 -18.402 -13.081 26.778 Atomic orbital electron populations 1.22139 0.80658 1.04677 1.00998 1.47658 1.06382 1.06479 1.73932 1.21809 0.97454 0.82836 0.99494 1.20902 0.95570 0.88791 0.93028 1.42550 1.68748 1.23147 1.05501 1.19029 1.30014 1.02746 0.85635 0.89224 1.24675 1.00361 0.97624 0.96441 1.69698 1.44841 1.19646 1.23959 0.86524 0.78105 0.79410 0.84379 1.21065 1.21608 1.20221 1.17014 0.86756 0.81673 0.77231 1.90914 1.12620 1.86019 1.48916 1.20548 0.82424 0.95926 1.15012 1.21340 0.99976 0.89254 1.02093 1.20701 0.90058 1.00131 1.09266 1.21100 0.89121 0.84539 1.11722 1.98403 1.23984 1.82474 1.94172 1.43121 1.09688 1.06624 1.55121 0.73013 0.92384 0.91145 0.88738 0.89449 0.90204 0.95572 0.94772 0.80656 0.92994 0.82333 0.82842 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.49 8.79 59.84 0.53 1.01 16 2 N -0.61 -7.94 2.87 -183.18 -0.53 -8.47 16 3 C 0.11 1.65 5.45 -4.04 -0.02 1.63 16 4 C 0.15 2.90 6.58 -4.04 -0.03 2.88 16 5 N -0.75 -18.32 5.41 -59.91 -0.32 -18.65 16 6 C -0.24 -7.10 10.47 -15.06 -0.16 -7.26 16 7 H 0.09 2.79 8.06 -52.49 -0.42 2.37 16 8 C 0.00 0.14 5.50 -17.43 -0.10 0.05 16 9 N -0.93 -29.73 13.97 55.49 0.78 -28.95 16 10 Si 0.89 22.23 27.73 -169.99 -4.71 17.52 16 11 H -0.28 -6.97 7.11 56.52 0.40 -6.57 16 12 H -0.29 -7.38 7.11 56.52 0.40 -6.97 16 13 H -0.28 -6.53 6.52 56.52 0.37 -6.17 16 14 C 0.59 8.63 7.62 -12.91 -0.10 8.54 16 15 O -0.51 -9.58 16.54 5.18 0.09 -9.49 16 16 C -0.03 -0.31 6.63 -81.94 -0.54 -0.85 16 17 C -0.10 -1.11 10.66 -39.13 -0.42 -1.53 16 18 C -0.18 -1.61 10.78 -39.94 -0.43 -2.04 16 19 C 0.08 0.69 7.74 -16.82 -0.13 0.56 16 20 Cl -0.02 -0.14 29.30 -51.86 -1.52 -1.65 16 21 N -0.54 -4.83 5.07 -6.55 -0.03 -4.86 16 22 H 0.42 2.84 4.94 -40.82 -0.20 2.64 16 23 H 0.06 0.34 7.45 -51.93 -0.39 -0.05 16 24 H 0.07 0.52 5.68 -51.93 -0.29 0.22 16 25 H 0.09 0.73 8.03 -51.93 -0.42 0.32 16 26 H 0.09 1.48 7.52 -51.93 -0.39 1.09 16 27 H 0.08 1.06 8.07 -51.93 -0.42 0.64 16 28 H 0.03 0.51 8.14 -51.93 -0.42 0.09 16 29 H 0.03 0.76 8.14 -51.93 -0.42 0.34 16 30 H 0.36 8.41 5.53 -40.82 -0.23 8.18 16 31 H 0.26 7.84 8.31 -40.82 -0.34 7.50 16 32 H 0.16 1.68 8.06 -52.49 -0.42 1.25 16 33 H 0.15 1.07 8.06 -52.48 -0.42 0.64 16 LS Contribution 297.83 15.07 4.49 4.49 Total: -1.00 -34.77 297.83 -6.78 -41.55 By element: Atomic # 1 Polarization: 9.16 SS G_CDS: -3.62 Total: 5.54 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: -1.40 Total: 2.98 kcal Atomic # 7 Polarization: -60.82 SS G_CDS: -0.11 Total: -60.93 kcal Atomic # 8 Polarization: -9.58 SS G_CDS: 0.09 Total: -9.49 kcal Atomic # 14 Polarization: 22.23 SS G_CDS: -4.71 Total: 17.52 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -1.52 Total: -1.65 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -34.77 -6.78 -41.55 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001691467036.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.460 kcal (2) G-P(sol) polarization free energy of solvation -34.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.551 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds