Wall clock time and date at job start Mon Mar 30 2020 00:55:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09006 * 109.46858 * 2 1 4 4 C 1.50698 * 109.46837 * 119.99439 * 2 1 3 5 5 H 1.07997 * 119.99802 * 85.87942 * 4 2 1 6 6 C 1.37875 * 120.00351 * 265.86648 * 4 2 1 7 7 N 1.31513 * 120.00160 * 177.63663 * 6 4 2 8 8 Si 1.86801 * 119.99892 * 357.65023 * 6 4 2 9 9 H 1.48509 * 109.46555 * 274.91328 * 8 6 4 10 10 H 1.48492 * 109.47414 * 34.91036 * 8 6 4 11 11 H 1.48503 * 109.47090 * 154.92065 * 8 6 4 12 12 N 1.46493 * 109.47181 * 240.00037 * 2 1 3 13 13 C 1.34777 * 120.00036 * 84.99862 * 12 2 1 14 14 O 1.21531 * 120.00279 * 359.97438 * 13 12 2 15 15 C 1.48004 * 119.99695 * 179.97438 * 13 12 2 16 16 C 1.39940 * 120.93522 * 359.71897 * 15 13 12 17 17 C 1.37997 * 119.06470 * 179.77465 * 16 15 13 18 18 N 1.31888 * 120.99456 * 0.51115 * 17 16 15 19 19 C 1.31797 * 122.07931 * 359.74101 * 18 17 16 20 20 Cl 1.73600 * 119.59067 * 179.97438 * 19 18 17 21 21 C 1.38702 * 120.81398 * 359.97438 * 19 18 17 22 22 F 1.35102 * 120.54525 * 180.02562 * 21 19 18 23 23 H 1.09000 * 109.47220 * 176.13458 * 1 2 3 24 24 H 1.09000 * 109.47341 * 296.13363 * 1 2 3 25 25 H 1.08996 * 109.47554 * 56.13746 * 1 2 3 26 26 H 0.96997 * 120.00529 * 179.97438 * 7 6 4 27 27 H 0.97005 * 119.99668 * 264.99489 * 12 2 1 28 28 H 1.08002 * 120.47099 * 0.02562 * 16 15 13 29 29 H 1.07998 * 119.49887 * 180.25577 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0322 -0.7103 1.2305 5 1 2.1488 -1.7839 1.2245 6 6 2.3432 0.0105 2.3640 7 7 2.7371 -0.6135 3.4526 8 14 2.2045 1.8733 2.3535 9 1 3.4568 2.4597 1.8118 10 1 1.0585 2.2797 1.5012 11 1 1.9885 2.3614 3.7393 12 7 2.0183 -0.6906 -1.1961 13 6 2.1470 -0.0182 -2.3571 14 8 1.8575 1.1608 -2.4118 15 6 2.6409 -0.7158 -3.5653 16 6 2.9854 -2.0715 -3.5230 17 6 3.4373 -2.6846 -4.6737 18 7 3.5565 -2.0101 -5.8008 19 6 3.2491 -0.7314 -5.8871 20 17 3.4316 0.0937 -7.4036 21 6 2.7816 -0.0368 -4.7813 22 9 2.4676 1.2738 -4.8760 23 1 -0.3633 -1.0253 -0.0693 24 1 -0.3634 0.4526 0.9226 25 1 -0.3634 0.5726 -0.8533 26 1 2.9562 -0.1064 4.2500 27 1 2.2491 -1.6318 -1.1525 28 1 2.8950 -2.6311 -2.6037 29 1 3.7011 -3.7316 -4.6500 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000270706670.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:55:33 Heat of formation + Delta-G solvation = -51.426805 kcal Electronic energy + Delta-G solvation = -18223.362610 eV Core-core repulsion = 14894.129605 eV Total energy + Delta-G solvation = -3329.233005 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 272.047 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -49.05699 -40.59362 -38.92145 -36.95521 -35.13845 -33.23201 -32.31220 -31.04919 -29.77823 -25.50689 -25.16006 -23.79927 -21.56946 -19.96205 -18.68987 -17.78874 -17.46337 -16.77865 -16.22979 -15.78210 -15.41652 -14.79206 -14.40151 -14.24282 -14.01354 -13.89375 -13.26567 -12.66904 -12.53861 -12.47860 -12.05907 -11.65680 -11.60152 -11.25063 -10.95254 -10.68682 -10.37793 -10.10512 -9.97834 -9.50696 -9.32043 -9.16006 -8.83923 -8.34559 -6.33726 -4.39185 0.28177 0.42304 1.38695 2.81827 3.18523 3.28230 3.34911 3.37943 3.54596 3.65153 4.10138 4.23640 4.29234 4.47515 4.75566 5.04761 5.22673 5.38807 5.48103 6.00031 6.19473 6.40180 6.54115 6.77720 6.99933 7.18235 7.19672 7.35186 7.91384 8.33481 8.57647 8.67746 9.26882 10.77501 Molecular weight = 272.05amu Principal moments of inertia in cm(-1) A = 0.033381 B = 0.004741 C = 0.004415 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 838.594600 B = 5904.132675 C = 6340.881881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.232 3.768 3 H 0.053 0.947 4 C -0.534 4.534 5 H 0.080 0.920 6 C 0.083 3.917 7 N -0.885 5.885 8 Si 0.873 3.127 9 H -0.272 1.272 10 H -0.259 1.259 11 H -0.284 1.284 12 N -0.687 5.687 13 C 0.540 3.460 14 O -0.530 6.530 15 C -0.103 4.103 16 C -0.109 4.109 17 C 0.102 3.898 18 N -0.441 5.441 19 C 0.133 3.867 20 Cl -0.010 7.010 21 C 0.120 3.880 22 F -0.093 7.093 23 H 0.047 0.953 24 H 0.058 0.942 25 H 0.030 0.970 26 H 0.269 0.731 27 H 0.394 0.606 28 H 0.161 0.839 29 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.880 -3.938 -15.956 16.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C 0.130 3.870 3 H 0.071 0.929 4 C -0.572 4.572 5 H 0.098 0.902 6 C -0.122 4.122 7 N -0.521 5.521 8 Si 0.699 3.301 9 H -0.197 1.197 10 H -0.183 1.183 11 H -0.210 1.210 12 N -0.336 5.336 13 C 0.324 3.676 14 O -0.408 6.408 15 C -0.115 4.115 16 C -0.129 4.129 17 C -0.054 4.054 18 N -0.152 5.152 19 C -0.033 4.033 20 Cl 0.018 6.982 21 C 0.096 3.904 22 F -0.071 7.071 23 H 0.066 0.934 24 H 0.077 0.923 25 H 0.049 0.951 26 H 0.079 0.921 27 H 0.229 0.771 28 H 0.179 0.821 29 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 1.018 -3.354 -16.598 16.964 hybrid contribution -0.170 1.112 0.708 1.329 sum 0.848 -2.242 -15.890 16.069 Atomic orbital electron populations 1.22247 0.98179 1.00353 1.00062 1.19221 0.91156 0.94416 0.82214 0.92947 1.20948 1.45915 0.95800 0.94565 0.90154 1.24921 0.93358 0.98707 0.95211 1.69861 1.43523 1.36396 1.02314 0.86916 0.80006 0.85594 0.77581 1.19739 1.18349 1.21006 1.46623 1.63755 1.13904 1.09298 1.17888 0.79866 0.86922 0.82961 1.90817 1.50437 1.14935 1.84599 1.20976 1.01228 0.95028 0.94247 1.22555 0.96011 0.93073 1.01285 1.22734 0.96010 1.00542 0.86149 1.66943 1.13678 1.05664 1.28944 1.21678 1.02160 0.91095 0.88330 1.98428 1.95814 1.75347 1.28602 1.18275 0.99115 0.80330 0.92686 1.91657 1.89173 1.30028 1.96202 0.93407 0.92319 0.95079 0.92062 0.77111 0.82119 0.80251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.11 9.44 37.16 0.35 -2.76 15 2 C 0.23 5.23 2.16 -69.09 -0.15 5.08 15 3 H 0.05 1.30 4.89 -51.93 -0.25 1.05 15 4 C -0.53 -13.59 9.05 -34.44 -0.31 -13.90 15 5 H 0.08 2.13 8.06 -52.49 -0.42 1.70 15 6 C 0.08 2.24 5.47 -17.82 -0.10 2.14 15 7 N -0.89 -25.10 13.96 55.43 0.77 -24.33 15 8 Si 0.87 20.84 26.74 -169.99 -4.55 16.29 15 9 H -0.27 -6.55 7.11 56.52 0.40 -6.15 15 10 H -0.26 -6.07 6.87 56.52 0.39 -5.69 15 11 H -0.28 -6.67 7.11 56.52 0.40 -6.27 15 12 N -0.69 -12.82 5.03 -55.83 -0.28 -13.10 15 13 C 0.54 10.12 7.76 -12.26 -0.10 10.03 15 14 O -0.53 -11.97 15.14 5.34 0.08 -11.89 15 15 C -0.10 -1.51 5.91 -104.61 -0.62 -2.13 15 16 C -0.11 -1.14 9.61 -39.03 -0.38 -1.52 15 17 C 0.10 0.96 11.16 -17.62 -0.20 0.76 15 18 N -0.44 -5.29 10.31 -10.36 -0.11 -5.39 15 19 C 0.13 1.77 7.28 -17.40 -0.13 1.64 15 20 Cl -0.01 -0.13 28.78 -51.86 -1.49 -1.62 15 21 C 0.12 1.80 7.30 -38.76 -0.28 1.52 15 22 F -0.09 -1.57 15.29 2.25 0.03 -1.54 15 23 H 0.05 0.91 8.14 -51.93 -0.42 0.48 15 24 H 0.06 1.24 7.92 -51.93 -0.41 0.83 15 25 H 0.03 0.62 8.14 -51.93 -0.42 0.20 15 26 H 0.27 7.20 8.31 -40.82 -0.34 6.86 15 27 H 0.39 6.08 6.73 -40.82 -0.27 5.81 15 28 H 0.16 1.27 6.54 -52.49 -0.34 0.93 15 29 H 0.18 0.96 8.06 -52.49 -0.42 0.54 15 LS Contribution 278.26 15.07 4.19 4.19 Total: -1.00 -30.86 278.26 -5.37 -36.23 By element: Atomic # 1 Polarization: 2.42 SS G_CDS: -2.12 Total: 0.30 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -1.90 Total: 0.86 kcal Atomic # 7 Polarization: -43.21 SS G_CDS: 0.39 Total: -42.82 kcal Atomic # 8 Polarization: -11.97 SS G_CDS: 0.08 Total: -11.89 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 0.03 Total: -1.54 kcal Atomic # 14 Polarization: 20.84 SS G_CDS: -4.55 Total: 16.29 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -1.49 Total: -1.62 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -30.86 -5.37 -36.23 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000270706670.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.198 kcal (2) G-P(sol) polarization free energy of solvation -30.861 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.229 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds