Wall clock time and date at job start Mon Mar 30 2020 01:47:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30853 * 125.78013 * 2 1 4 4 N 1.40075 * 108.41578 * 180.02562 * 3 2 1 5 5 C 1.46498 * 126.09165 * 180.02562 * 4 3 2 6 6 C 1.35855 * 107.81526 * 0.02562 * 4 3 2 7 7 N 1.39574 * 126.26356 * 179.97438 * 6 4 3 8 8 C 1.34783 * 120.00247 * 307.90676 * 7 6 4 9 9 O 1.21591 * 119.99635 * 6.11222 * 8 7 6 10 10 N 1.34772 * 119.99962 * 186.11629 * 8 7 6 11 11 C 1.46498 * 120.00116 * 179.97438 * 10 8 7 12 12 C 1.50703 * 109.47513 * 179.97438 * 11 10 8 13 13 H 1.07998 * 119.99906 * 359.97438 * 12 11 10 14 14 C 1.37872 * 120.00208 * 179.97438 * 12 11 10 15 15 N 1.31516 * 119.99907 * 359.97438 * 14 12 11 16 16 Si 1.86792 * 120.00158 * 179.97438 * 14 12 11 17 17 H 1.48496 * 109.47470 * 59.99913 * 16 14 12 18 18 H 1.48506 * 109.47434 * 179.97438 * 16 14 12 19 19 H 1.48503 * 109.47339 * 299.99674 * 16 14 12 20 20 C 1.36144 * 107.47171 * 0.02562 * 6 4 3 21 21 Cl 1.73605 * 126.06918 * 179.73791 * 20 6 4 22 22 H 1.08996 * 109.46659 * 269.96844 * 1 2 3 23 23 H 1.08994 * 109.47258 * 29.97317 * 1 2 3 24 24 H 1.09000 * 109.47070 * 149.97285 * 1 2 3 25 25 H 1.09007 * 109.47040 * 275.92450 * 5 4 3 26 26 H 1.08999 * 109.47334 * 35.92537 * 5 4 3 27 27 H 1.08997 * 109.47004 * 155.93192 * 5 4 3 28 28 H 0.97005 * 120.00044 * 127.90344 * 7 6 4 29 29 H 0.97004 * 120.00426 * 359.97438 * 10 8 7 30 30 H 1.09001 * 109.47215 * 299.99868 * 11 10 8 31 31 H 1.09000 * 109.47254 * 59.99340 * 11 10 8 32 32 H 0.96999 * 120.00118 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2721 1.0616 0.0000 4 7 3.6090 0.6435 -0.0006 5 6 4.7860 1.5158 -0.0003 6 6 3.6197 -0.7150 -0.0015 7 7 4.7515 -1.5317 -0.0029 8 6 5.7171 -1.3439 -0.9243 9 8 5.6570 -0.3958 -1.6832 10 7 6.7490 -2.2070 -1.0046 11 6 7.7982 -2.0032 -2.0065 12 6 8.8271 -3.0978 -1.8864 13 1 8.7113 -3.8680 -1.1382 14 6 9.9162 -3.1160 -2.7316 15 7 10.0570 -2.1784 -3.6430 16 14 11.1918 -4.4723 -2.5822 17 1 10.5428 -5.7891 -2.8052 18 1 12.2547 -4.2665 -3.5988 19 1 11.7922 -4.4399 -1.2243 20 6 2.3243 -1.1339 -0.0021 21 17 1.7836 -2.7836 -0.0098 22 1 -0.3632 -0.0006 1.0277 23 1 -0.3633 0.8902 -0.5134 24 1 -0.3633 -0.8897 -0.5143 25 1 5.0145 1.8181 -1.0223 26 1 4.5825 2.4003 0.6033 27 1 5.6366 0.9780 0.4183 28 1 4.8433 -2.2345 0.6595 29 1 6.7971 -2.9632 -0.3990 30 1 7.3579 -2.0258 -3.0034 31 1 8.2751 -1.0370 -1.8419 32 1 10.8230 -2.1913 -4.2379 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000888640327.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:47:35 Heat of formation + Delta-G solvation = 38.155942 kcal Electronic energy + Delta-G solvation = -18413.069507 eV Core-core repulsion = 15243.474157 eV Total energy + Delta-G solvation = -3169.595350 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 272.078 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.51482 -39.34207 -36.38805 -34.99240 -34.28547 -33.49010 -32.37428 -29.82383 -28.91758 -27.09805 -25.35735 -23.19988 -21.28070 -20.80448 -19.66129 -18.42686 -17.58600 -16.22978 -15.82608 -15.59771 -15.10312 -14.84381 -14.28866 -14.08910 -13.58697 -13.39806 -13.22482 -12.65454 -12.46287 -12.33421 -12.07956 -12.05786 -11.51494 -11.39143 -11.06459 -10.96183 -10.66847 -10.40865 -10.07058 -9.76221 -9.50414 -8.94264 -8.80890 -8.24586 -7.98637 -6.24246 -4.31926 1.64142 1.94300 2.45116 2.59952 3.05262 3.20972 3.26523 3.27907 3.57782 4.24813 4.45099 4.75471 4.90060 5.12309 5.21461 5.31577 5.38097 5.50925 5.68029 5.78694 5.83478 6.02613 6.41503 6.71810 7.02680 7.22446 7.34015 7.40613 7.55828 7.70271 7.88340 8.52322 8.70157 8.98126 9.34861 10.85756 Molecular weight = 272.08amu Principal moments of inertia in cm(-1) A = 0.032200 B = 0.004112 C = 0.003765 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 869.368483 B = 6808.147681 C = 7435.575768 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.097 3.903 3 N -0.280 5.280 4 N -0.352 5.352 5 C 0.115 3.885 6 C 0.363 3.637 7 N -0.677 5.677 8 C 0.692 3.308 9 O -0.581 6.581 10 N -0.715 5.715 11 C 0.267 3.733 12 C -0.546 4.546 13 H 0.064 0.936 14 C 0.066 3.934 15 N -0.884 5.884 16 Si 0.906 3.094 17 H -0.275 1.275 18 H -0.285 1.285 19 H -0.275 1.275 20 C -0.207 4.207 21 Cl -0.041 7.041 22 H 0.079 0.921 23 H 0.076 0.924 24 H 0.080 0.920 25 H 0.090 0.910 26 H 0.082 0.918 27 H 0.084 0.916 28 H 0.416 0.584 29 H 0.391 0.609 30 H 0.028 0.972 31 H 0.028 0.972 32 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.820 1.744 10.358 18.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.069 4.069 3 N -0.104 5.104 4 N -0.137 5.137 5 C -0.025 4.025 6 C 0.139 3.861 7 N -0.334 5.334 8 C 0.392 3.608 9 O -0.458 6.458 10 N -0.366 5.366 11 C 0.146 3.854 12 C -0.585 4.585 13 H 0.082 0.918 14 C -0.139 4.139 15 N -0.521 5.521 16 Si 0.733 3.267 17 H -0.200 1.200 18 H -0.210 1.210 19 H -0.200 1.200 20 C -0.248 4.248 21 Cl -0.013 7.013 22 H 0.098 0.902 23 H 0.095 0.905 24 H 0.099 0.901 25 H 0.108 0.892 26 H 0.101 0.899 27 H 0.103 0.897 28 H 0.254 0.746 29 H 0.224 0.776 30 H 0.046 0.954 31 H 0.046 0.954 32 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -14.478 3.878 9.419 17.702 hybrid contribution 1.013 -2.449 0.558 2.709 sum -13.464 1.429 9.977 16.819 Atomic orbital electron populations 1.20212 0.85962 1.03716 1.03222 1.21944 0.97169 0.88513 0.99314 1.77455 0.85338 1.21144 1.26486 1.48586 1.06044 1.03239 1.55783 1.21918 0.82796 0.93186 1.04649 1.17026 0.86656 0.82608 0.99850 1.42211 1.19123 1.36426 1.35654 1.16174 0.79831 0.84010 0.80753 1.90929 1.78168 1.31989 1.44749 1.45773 1.23693 1.27673 1.39466 1.19099 0.82956 0.97443 0.85880 1.21147 1.07221 1.11044 1.19056 0.91835 1.24931 0.97923 0.96286 0.94727 1.69958 1.29973 1.32936 1.19276 0.86444 0.80612 0.81712 0.77970 1.20003 1.21020 1.20034 1.19964 0.90996 0.87334 1.26528 1.98299 1.89538 1.15551 1.97949 0.90206 0.90466 0.90105 0.89185 0.89932 0.89734 0.74638 0.77614 0.95360 0.95410 0.92272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.69 10.30 36.01 0.37 -0.32 16 2 C 0.10 1.33 7.20 -82.43 -0.59 0.74 16 3 N -0.28 -4.33 12.56 33.66 0.42 -3.91 16 4 N -0.35 -5.61 3.96 -66.99 -0.27 -5.88 16 5 C 0.12 1.63 9.63 59.85 0.58 2.21 16 6 C 0.36 5.73 6.88 -152.51 -1.05 4.68 16 7 N -0.68 -10.20 5.31 -15.68 -0.08 -10.28 16 8 C 0.69 13.28 7.79 -86.92 -0.68 12.60 16 9 O -0.58 -13.24 13.68 5.29 0.07 -13.16 16 10 N -0.71 -14.13 5.55 -66.41 -0.37 -14.50 16 11 C 0.27 6.73 5.43 -5.19 -0.03 6.71 16 12 C -0.55 -14.23 9.28 -34.44 -0.32 -14.55 16 13 H 0.06 1.54 7.60 -52.49 -0.40 1.14 16 14 C 0.07 1.76 5.46 -17.82 -0.10 1.66 16 15 N -0.88 -25.33 13.29 55.43 0.74 -24.59 16 16 Si 0.91 20.29 29.54 -169.99 -5.02 15.26 16 17 H -0.27 -6.05 7.11 56.52 0.40 -5.64 16 18 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 19 H -0.27 -6.01 7.11 56.52 0.40 -5.61 16 20 C -0.21 -3.00 6.66 -39.76 -0.26 -3.27 16 21 Cl -0.04 -0.52 28.98 -51.86 -1.50 -2.02 16 22 H 0.08 0.62 8.14 -51.93 -0.42 0.20 16 23 H 0.08 0.67 8.14 -51.93 -0.42 0.24 16 24 H 0.08 0.69 7.99 -51.93 -0.41 0.28 16 25 H 0.09 1.42 7.53 -51.93 -0.39 1.02 16 26 H 0.08 0.93 8.14 -51.93 -0.42 0.50 16 27 H 0.08 1.20 7.28 -51.93 -0.38 0.82 16 28 H 0.42 4.88 8.84 -40.82 -0.36 4.52 16 29 H 0.39 6.51 8.34 -40.82 -0.34 6.17 16 30 H 0.03 0.80 8.14 -51.93 -0.42 0.38 16 31 H 0.03 0.77 8.14 -51.93 -0.42 0.35 16 32 H 0.27 7.22 8.31 -40.82 -0.34 6.88 16 LS Contribution 299.43 15.07 4.51 4.51 Total: -1.00 -31.72 299.43 -7.11 -38.83 By element: Atomic # 1 Polarization: 8.81 SS G_CDS: -3.53 Total: 5.28 kcal Atomic # 6 Polarization: 12.55 SS G_CDS: -2.08 Total: 10.46 kcal Atomic # 7 Polarization: -59.61 SS G_CDS: 0.44 Total: -59.16 kcal Atomic # 8 Polarization: -13.24 SS G_CDS: 0.07 Total: -13.16 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -5.02 Total: 15.26 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.50 Total: -2.02 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -31.72 -7.11 -38.83 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000888640327.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.989 kcal (2) G-P(sol) polarization free energy of solvation -31.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.269 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.833 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds