Wall clock time and date at job start Mon Mar 30 2020 01:49:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 N 1.46506 * 109.46865 * 259.13395 * 3 2 1 5 5 C 1.36787 * 120.00105 * 129.05329 * 4 3 2 6 6 H 1.07993 * 120.00630 * 119.72884 * 5 4 3 7 7 C 1.39106 * 119.99409 * 300.00532 * 5 4 3 8 8 N 1.31323 * 120.00495 * 40.12313 * 7 5 4 9 9 Si 1.86806 * 119.99639 * 220.12286 * 7 5 4 10 10 H 1.48496 * 109.46898 * 90.00235 * 9 7 5 11 11 H 1.48510 * 109.46925 * 210.00023 * 9 7 5 12 12 H 1.48491 * 109.47171 * 329.99634 * 9 7 5 13 13 C 1.34777 * 120.00087 * 309.04422 * 4 3 2 14 14 O 1.21609 * 120.00144 * 185.61664 * 13 4 3 15 15 C 1.47605 * 119.99805 * 5.62340 * 13 4 3 16 16 C 1.39803 * 120.02072 * 338.41861 * 15 13 4 17 17 C 1.37584 * 120.02428 * 179.72004 * 16 15 13 18 18 C 1.39788 * 120.07638 * 0.55724 * 17 16 15 19 19 C 1.43201 * 119.98168 * 179.69586 * 18 17 16 20 20 N 6.24948 * 55.30214 * 174.17408 * 2 1 3 21 21 C 1.39596 * 120.04434 * 359.72080 * 18 17 16 22 22 C 1.38042 * 119.96741 * 0.02562 * 21 18 17 23 23 F 1.35098 * 120.03552 * 179.97438 * 22 21 18 24 24 H 4.40642 * 5.51418 * 179.97438 * 4 1 2 25 25 H 1.09004 * 109.47287 * 139.13620 * 3 2 1 26 26 H 1.08998 * 109.47621 * 19.13257 * 3 2 1 27 27 H 0.97000 * 120.00313 * 180.02562 * 8 7 5 28 28 H 1.07995 * 119.98249 * 359.97438 * 16 15 13 29 29 H 1.08002 * 119.95901 * 180.25314 * 17 16 15 30 30 H 1.08001 * 120.01354 * 180.02562 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1342 0.2613 1.3565 5 6 4.0662 -0.5671 1.9189 6 1 5.0245 -0.1736 2.2239 7 6 3.7816 -1.9175 2.0928 8 7 3.1342 -2.5776 1.1603 9 14 4.3205 -2.7922 3.6530 10 1 3.2470 -2.6895 4.6740 11 1 4.5831 -4.2228 3.3530 12 1 5.5597 -2.1598 4.1722 13 6 2.6651 1.3173 2.0503 14 8 3.1428 1.5936 3.1339 15 6 1.5715 2.1383 1.4948 16 6 1.3229 2.1338 0.1190 17 6 0.2998 2.8946 -0.3982 18 6 -0.4851 3.6821 0.4491 19 6 -1.5452 4.4782 -0.0921 20 7 -2.3834 5.1116 -0.5216 21 6 -0.2359 3.6933 1.8226 22 6 0.7868 2.9266 2.3441 23 9 1.0295 2.9369 3.6731 24 1 -1.0501 0.0002 -0.0001 25 1 3.0090 0.7780 -0.6724 26 1 3.0099 -0.9700 -0.3368 27 1 2.9354 -3.5193 1.2817 28 1 1.9315 1.5298 -0.5374 29 1 0.1061 2.8872 -1.4607 30 1 -0.8429 4.3015 2.4769 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001459387883.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:49:25 Heat of formation + Delta-G solvation = 99.084468 kcal Electronic energy + Delta-G solvation = -20126.656888 eV Core-core repulsion = 16806.383390 eV Total energy + Delta-G solvation = -3320.273497 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 272.070 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.48752 -40.20552 -38.08886 -36.38952 -35.59061 -33.51511 -31.60838 -30.90041 -30.18574 -27.00781 -25.71777 -23.80866 -22.60834 -20.10600 -19.24725 -17.95060 -17.42496 -16.50825 -16.24852 -15.77134 -15.36247 -15.20443 -14.62615 -14.40030 -14.01675 -13.90678 -13.86527 -13.39447 -13.00440 -12.77609 -12.57183 -12.22820 -12.08692 -11.98241 -11.59574 -11.40641 -10.83250 -10.41048 -10.39428 -10.08706 -9.91653 -8.81302 -8.68115 -8.57284 -8.24895 -7.65458 -6.76096 -4.25847 0.52667 1.26343 2.55442 2.68842 3.14039 3.15980 3.26781 3.35122 3.38538 3.63716 3.70592 4.00372 4.24913 4.43069 4.53292 4.77069 4.80761 4.87042 4.98162 5.30655 5.35185 5.62606 5.94492 6.04096 6.05867 6.23024 6.25795 6.40302 6.72931 6.83426 7.34210 7.36034 8.06716 8.23189 8.31723 8.93979 9.01741 9.75188 10.29735 Molecular weight = 272.07amu Principal moments of inertia in cm(-1) A = 0.028052 B = 0.006191 C = 0.005461 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 997.895494 B = 4521.454375 C = 5126.187907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C -0.152 4.152 3 C 0.182 3.818 4 N -0.430 5.430 5 C -0.358 4.358 6 H 0.093 0.907 7 C 0.085 3.915 8 N -0.824 5.824 9 Si 0.892 3.108 10 H -0.273 1.273 11 H -0.287 1.287 12 H -0.264 1.264 13 C 0.509 3.491 14 O -0.545 6.545 15 C -0.129 4.129 16 C -0.072 4.072 17 C -0.104 4.104 18 C 0.004 3.996 19 C 0.264 3.736 20 N -0.424 5.424 21 C -0.135 4.135 22 C 0.151 3.849 23 F -0.115 7.115 24 H 0.209 0.791 25 H 0.072 0.928 26 H 0.138 0.862 27 H 0.276 0.724 28 H 0.183 0.817 29 H 0.137 0.863 30 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.703 5.098 -5.080 8.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.245 4.245 2 C -0.153 4.153 3 C 0.061 3.939 4 N -0.150 5.150 5 C -0.484 4.484 6 H 0.111 0.889 7 C -0.128 4.128 8 N -0.454 5.454 9 Si 0.717 3.283 10 H -0.199 1.199 11 H -0.213 1.213 12 H -0.188 1.188 13 C 0.297 3.703 14 O -0.426 6.426 15 C -0.134 4.134 16 C -0.089 4.089 17 C -0.125 4.125 18 C 0.000 4.000 19 C -0.051 4.051 20 N -0.099 5.099 21 C -0.157 4.157 22 C 0.130 3.870 23 F -0.093 7.093 24 H 0.226 0.774 25 H 0.089 0.911 26 H 0.156 0.844 27 H 0.086 0.914 28 H 0.199 0.801 29 H 0.155 0.845 30 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -5.765 5.995 -5.219 9.819 hybrid contribution 0.064 -0.891 1.107 1.422 sum -5.701 5.104 -4.112 8.687 Atomic orbital electron populations 1.24732 0.95744 1.04290 0.99699 1.23215 0.95150 0.96071 1.00813 1.19612 0.82614 1.04260 0.87434 1.43145 1.36764 1.24449 1.10613 1.18905 0.97820 0.89165 1.42473 0.88916 1.25646 0.94190 0.96963 0.95980 1.69939 1.36303 1.10007 1.29191 0.86546 0.80143 0.77333 0.84310 1.19899 1.21289 1.18763 1.18167 0.83182 0.83639 0.85306 1.90695 1.59955 1.70683 1.21290 1.20716 0.99452 0.99362 0.93918 1.22709 0.96899 0.94176 0.95130 1.20976 0.95332 0.96482 0.99719 1.15687 0.93594 0.98175 0.92502 1.25598 0.92952 0.93160 0.93363 1.81188 1.10611 1.09751 1.08334 1.20828 0.98871 1.01750 0.94234 1.17341 0.94952 0.96461 0.78256 1.91586 1.93353 1.94687 1.29675 0.77380 0.91096 0.84429 0.91364 0.80072 0.84533 0.84043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -3.50 16.73 29.55 0.49 -3.00 16 2 C -0.15 -2.64 8.86 -37.12 -0.33 -2.97 16 3 C 0.18 3.43 5.21 -6.83 -0.04 3.40 16 4 N -0.43 -9.96 2.76 -121.73 -0.34 -10.29 16 5 C -0.36 -9.16 8.40 -15.02 -0.13 -9.29 16 6 H 0.09 2.46 8.06 -52.49 -0.42 2.04 16 7 C 0.08 2.10 5.42 -17.45 -0.09 2.01 16 8 N -0.82 -19.91 11.59 55.50 0.64 -19.27 16 9 Si 0.89 19.83 29.69 -169.99 -5.05 14.78 16 10 H -0.27 -6.34 7.11 56.52 0.40 -5.94 16 11 H -0.29 -6.13 7.11 56.52 0.40 -5.73 16 12 H -0.26 -5.89 7.11 56.52 0.40 -5.49 16 13 C 0.51 11.89 7.28 -12.44 -0.09 11.80 16 14 O -0.55 -14.74 15.58 5.27 0.08 -14.66 16 15 C -0.13 -2.38 4.99 -104.85 -0.52 -2.91 16 16 C -0.07 -1.05 5.44 -39.23 -0.21 -1.26 16 17 C -0.10 -1.24 8.81 -39.24 -0.35 -1.59 16 18 C 0.00 0.05 5.73 -106.88 -0.61 -0.56 16 19 C 0.26 3.32 15.31 -22.51 -0.34 2.98 16 20 N -0.42 -6.03 18.53 41.80 0.77 -5.25 16 21 C -0.14 -1.81 9.71 -39.15 -0.38 -2.19 16 22 C 0.15 2.60 7.24 -39.01 -0.28 2.32 16 23 F -0.11 -2.26 15.76 2.25 0.04 -2.23 16 24 H 0.21 2.55 7.80 -54.09 -0.42 2.13 16 25 H 0.07 1.08 6.22 -51.93 -0.32 0.76 16 26 H 0.14 2.85 6.13 -51.93 -0.32 2.53 16 27 H 0.28 6.33 8.31 -40.82 -0.34 5.99 16 28 H 0.18 2.54 2.74 -57.16 -0.16 2.39 16 29 H 0.14 1.26 8.06 -52.49 -0.42 0.83 16 30 H 0.14 1.57 8.06 -52.49 -0.42 1.15 16 LS Contribution 279.75 15.07 4.22 4.22 Total: -1.00 -29.16 279.75 -4.14 -33.30 By element: Atomic # 1 Polarization: 2.29 SS G_CDS: -1.62 Total: 0.66 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -2.88 Total: -1.27 kcal Atomic # 7 Polarization: -35.90 SS G_CDS: 1.08 Total: -34.82 kcal Atomic # 8 Polarization: -14.74 SS G_CDS: 0.08 Total: -14.66 kcal Atomic # 9 Polarization: -2.26 SS G_CDS: 0.04 Total: -2.23 kcal Atomic # 14 Polarization: 19.83 SS G_CDS: -5.05 Total: 14.78 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -29.16 -4.14 -33.30 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001459387883.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.386 kcal (2) G-P(sol) polarization free energy of solvation -29.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.301 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.084 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds