Wall clock time and date at job start Mon Mar 30 2020 01:32:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.46495 * 120.00453 * 2 1 4 4 C 1.52992 * 109.47526 * 270.00615 * 3 2 1 5 5 N 1.46503 * 109.47420 * 179.97438 * 4 3 2 6 6 C 1.36935 * 120.00214 * 179.97438 * 5 4 3 7 7 H 1.08000 * 119.99847 * 0.02562 * 6 5 4 8 8 C 1.38819 * 119.99816 * 179.97438 * 6 5 4 9 9 N 1.31614 * 119.99562 * 180.02562 * 8 6 5 10 10 Si 1.86797 * 120.00141 * 0.02562 * 8 6 5 11 11 H 1.48491 * 109.47216 * 89.99659 * 10 8 6 12 12 H 1.48492 * 109.47090 * 210.00126 * 10 8 6 13 13 H 1.48502 * 109.47019 * 329.99646 * 10 8 6 14 14 C 1.34781 * 119.99419 * 180.02562 * 2 1 3 15 15 O 1.21720 * 119.99269 * 183.36858 * 14 2 1 16 16 C 1.46494 * 120.00460 * 3.36939 * 14 2 1 17 17 O 1.34987 * 126.00451 * 353.21748 * 16 14 2 18 18 C 1.33944 * 109.40413 * 179.73577 * 17 16 14 19 19 C 1.35075 * 108.81671 * 359.97438 * 18 17 16 20 20 C 1.36709 * 126.00889 * 172.90234 * 16 14 2 21 21 Cl 1.73599 * 126.66702 * 0.29075 * 20 16 14 22 22 H 1.08996 * 109.46902 * 263.98737 * 1 2 3 23 23 H 1.09003 * 109.46748 * 23.98404 * 1 2 3 24 24 H 1.09001 * 109.47091 * 143.97812 * 1 2 3 25 25 H 1.09006 * 109.46871 * 30.00557 * 3 2 1 26 26 H 1.08997 * 109.47317 * 149.99997 * 3 2 1 27 27 H 1.08997 * 109.47159 * 299.99621 * 4 3 2 28 28 H 1.09002 * 109.47776 * 59.99934 * 4 3 2 29 29 H 0.97000 * 119.99374 * 0.02562 * 5 4 3 30 30 H 0.96998 * 119.99724 * 180.02562 * 9 8 6 31 31 H 1.07996 * 125.59092 * 180.02562 * 18 17 16 32 32 H 1.08001 * 126.43466 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1976 1.2686 0.0000 4 6 2.4526 1.7104 -1.4424 5 7 3.1847 2.9794 -1.4424 6 6 3.5273 3.5723 -2.6282 7 1 3.2575 3.1045 -3.5635 8 6 4.2205 4.7750 -2.6281 9 7 4.5494 5.3450 -3.7679 10 14 4.6865 5.5843 -1.0103 11 1 6.0229 5.0996 -0.5812 12 1 4.7280 7.0580 -1.1880 13 1 3.6789 5.2387 0.0243 14 6 2.1388 -1.1673 -0.0005 15 8 3.3545 -1.1682 0.0614 16 6 1.4083 -2.4348 -0.0756 17 8 0.0677 -2.5826 -0.0192 18 6 -0.2417 -3.8815 -0.1249 19 6 0.8999 -4.5923 -0.2520 20 6 1.9639 -3.6754 -0.2213 21 17 3.6555 -4.0457 -0.3442 22 1 -0.3633 -0.1076 1.0220 23 1 -0.3633 0.9390 -0.4177 24 1 -0.3633 -0.8312 -0.6044 25 1 1.6086 2.0283 0.5140 26 1 3.1500 1.1383 0.5138 27 1 3.0416 0.9508 -1.9563 28 1 1.5002 1.8409 -1.9563 29 1 3.4272 3.3993 -0.6023 30 1 5.0341 6.1852 -3.7678 31 1 -1.2401 -4.2929 -0.1115 32 1 0.9797 -5.6642 -0.3573 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001731950397.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:32:19 Heat of formation + Delta-G solvation = 6.686320 kcal Electronic energy + Delta-G solvation = -18390.821403 eV Core-core repulsion = 15187.568677 eV Total energy + Delta-G solvation = -3203.252726 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 272.071 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -43.12298 -39.63881 -36.86890 -36.11854 -34.56149 -33.18329 -31.66432 -30.41775 -28.55562 -26.68061 -24.35851 -22.58383 -22.15729 -21.32774 -20.13222 -18.00994 -17.59242 -16.96244 -16.77220 -16.06295 -15.12028 -14.56240 -14.36971 -14.08390 -13.75106 -13.65155 -13.57597 -13.38313 -13.11976 -12.64156 -12.47906 -12.12173 -11.60469 -11.17280 -11.16362 -11.07735 -10.74485 -10.17296 -10.12099 -9.99200 -9.58678 -9.05446 -8.88668 -8.62651 -7.23913 -5.75001 -3.11515 0.66846 1.77031 1.86294 2.43868 2.89470 3.04218 3.39133 3.43151 3.47568 4.17515 4.38167 4.61130 4.79376 4.98872 5.12747 5.23262 5.31400 5.38715 5.55876 5.57943 5.64350 5.71008 5.77685 5.91060 6.27652 6.41325 6.61154 6.76838 7.23778 7.95743 8.01395 8.43123 9.21459 9.93502 10.12580 11.43322 Molecular weight = 272.07amu Principal moments of inertia in cm(-1) A = 0.029527 B = 0.004127 C = 0.003870 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 948.062996 B = 6782.505776 C = 7233.556208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.073 3.927 2 N -0.600 5.600 3 C 0.104 3.896 4 C 0.145 3.855 5 N -0.753 5.753 6 C -0.244 4.244 7 H 0.090 0.910 8 C 0.005 3.995 9 N -0.934 5.934 10 Si 0.886 3.114 11 H -0.283 1.283 12 H -0.290 1.290 13 H -0.277 1.277 14 C 0.591 3.409 15 O -0.496 6.496 16 C -0.052 4.052 17 O -0.146 6.146 18 C -0.004 4.004 19 C -0.212 4.212 20 C -0.055 4.055 21 Cl -0.004 7.004 22 H 0.059 0.941 23 H 0.082 0.918 24 H 0.080 0.920 25 H 0.082 0.918 26 H 0.089 0.911 27 H 0.032 0.968 28 H 0.028 0.972 29 H 0.361 0.639 30 H 0.260 0.740 31 H 0.217 0.783 32 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.160 -20.801 10.730 26.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.332 5.332 3 C -0.018 4.018 4 C 0.017 3.983 5 N -0.399 5.399 6 C -0.374 4.374 7 H 0.108 0.892 8 C -0.191 4.191 9 N -0.582 5.582 10 Si 0.716 3.284 11 H -0.209 1.209 12 H -0.217 1.217 13 H -0.203 1.203 14 C 0.378 3.622 15 O -0.371 6.371 16 C -0.105 4.105 17 O -0.041 6.041 18 C -0.074 4.074 19 C -0.232 4.232 20 C -0.085 4.085 21 Cl 0.025 6.975 22 H 0.077 0.923 23 H 0.101 0.899 24 H 0.098 0.902 25 H 0.100 0.900 26 H 0.107 0.893 27 H 0.050 0.950 28 H 0.046 0.954 29 H 0.194 0.806 30 H 0.070 0.930 31 H 0.233 0.767 32 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -12.528 -20.502 10.540 26.237 hybrid contribution 0.396 0.341 0.947 1.081 sum -12.132 -20.161 11.487 26.184 Atomic orbital electron populations 1.22046 0.78807 1.03912 1.02186 1.47644 1.07469 1.05812 1.72323 1.21834 0.97686 0.82799 0.99455 1.20903 0.95593 0.88771 0.93007 1.42544 1.68797 1.23068 1.05524 1.19030 1.29851 1.02886 0.85630 0.89220 1.24668 1.00401 0.97570 0.96426 1.69702 1.44846 1.19674 1.23945 0.86523 0.78634 0.78940 0.84294 1.20927 1.21679 1.20331 1.16567 0.86343 0.81123 0.78216 1.90971 1.11462 1.85466 1.49211 1.21989 0.80561 0.95543 1.12411 1.84438 1.22378 1.27275 1.70032 1.24410 1.00532 0.80446 1.01969 1.21662 0.90437 1.01387 1.09715 1.21301 0.88782 0.92731 1.05648 1.98403 1.08943 1.94095 1.96030 0.92284 0.89928 0.90169 0.90003 0.89282 0.94973 0.95423 0.80613 0.93019 0.76668 0.81805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.74 9.63 59.85 0.58 1.31 16 2 N -0.60 -8.49 2.87 -183.19 -0.53 -9.02 16 3 C 0.10 1.69 5.52 -4.05 -0.02 1.67 16 4 C 0.15 2.96 6.58 -4.04 -0.03 2.94 16 5 N -0.75 -18.55 5.41 -59.91 -0.32 -18.88 16 6 C -0.24 -7.14 10.47 -15.06 -0.16 -7.30 16 7 H 0.09 2.81 8.06 -52.49 -0.42 2.39 16 8 C 0.01 0.15 5.50 -17.43 -0.10 0.06 16 9 N -0.93 -29.86 13.97 55.49 0.78 -29.09 16 10 Si 0.89 22.44 27.74 -169.99 -4.71 17.73 16 11 H -0.28 -7.16 7.11 56.52 0.40 -6.76 16 12 H -0.29 -7.39 7.11 56.52 0.40 -6.99 16 13 H -0.28 -6.51 6.52 56.52 0.37 -6.14 16 14 C 0.59 9.26 7.64 -12.93 -0.10 9.16 16 15 O -0.50 -9.40 15.13 5.17 0.08 -9.32 16 16 C -0.05 -0.66 6.77 -36.81 -0.25 -0.91 16 17 O -0.15 -1.39 7.29 4.75 0.03 -1.35 16 18 C 0.00 -0.03 12.07 29.61 0.36 0.33 16 19 C -0.21 -1.75 10.88 -39.86 -0.43 -2.19 16 20 C -0.05 -0.66 6.75 -39.28 -0.27 -0.93 16 21 Cl 0.00 -0.05 27.87 -51.86 -1.45 -1.50 16 22 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 23 H 0.08 0.78 8.03 -51.93 -0.42 0.36 16 24 H 0.08 0.75 5.40 -51.93 -0.28 0.47 16 25 H 0.08 1.16 8.07 -51.93 -0.42 0.74 16 26 H 0.09 1.55 7.38 -51.93 -0.38 1.17 16 27 H 0.03 0.72 8.14 -51.93 -0.42 0.30 16 28 H 0.03 0.55 8.14 -51.93 -0.42 0.13 16 29 H 0.36 8.54 5.53 -40.82 -0.23 8.31 16 30 H 0.26 7.87 8.31 -40.82 -0.34 7.54 16 31 H 0.22 0.37 8.06 -52.49 -0.42 -0.06 16 32 H 0.16 0.94 8.06 -52.49 -0.42 0.51 16 LS Contribution 294.12 15.07 4.43 4.43 Total: -1.00 -35.27 294.12 -5.54 -40.81 By element: Atomic # 1 Polarization: 5.47 SS G_CDS: -3.43 Total: 2.04 kcal Atomic # 6 Polarization: 4.55 SS G_CDS: -0.42 Total: 4.14 kcal Atomic # 7 Polarization: -56.91 SS G_CDS: -0.08 Total: -56.98 kcal Atomic # 8 Polarization: -10.78 SS G_CDS: 0.11 Total: -10.67 kcal Atomic # 14 Polarization: 22.44 SS G_CDS: -4.71 Total: 17.73 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.45 Total: -1.50 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -35.27 -5.54 -40.81 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001731950397.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.494 kcal (2) G-P(sol) polarization free energy of solvation -35.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.222 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.808 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.686 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds