Wall clock time and date at job start Mon Mar 30 2020 00:53:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13609 * 1 3 3 C 1.47191 * 179.97438 * 2 1 4 4 C 1.53001 * 109.47170 * 221.70589 * 3 2 1 5 5 N 1.46497 * 109.47360 * 179.97438 * 4 3 2 6 6 C 1.46501 * 120.00488 * 274.96449 * 5 4 3 7 7 C 1.50701 * 109.47110 * 262.72011 * 6 5 4 8 8 H 1.08004 * 119.99895 * 359.97438 * 7 6 5 9 9 C 1.37875 * 120.00320 * 179.97438 * 7 6 5 10 10 N 1.31511 * 119.99701 * 359.97438 * 9 7 6 11 11 Si 1.86797 * 120.00269 * 180.02562 * 9 7 6 12 12 H 1.48501 * 109.47077 * 359.97438 * 11 9 7 13 13 H 1.48498 * 109.47324 * 119.99590 * 11 9 7 14 14 H 1.48506 * 109.47103 * 239.99919 * 11 9 7 15 15 C 1.34775 * 119.99645 * 94.96036 * 5 4 3 16 16 O 1.21649 * 120.00413 * 0.57881 * 15 5 4 17 17 C 1.47068 * 120.00073 * 180.57721 * 15 5 4 18 18 C 1.38001 * 125.92030 * 170.06085 * 17 15 5 19 19 C 1.39356 * 107.48485 * 180.02562 * 18 17 15 20 20 C 1.38076 * 107.51546 * 359.97438 * 19 18 17 21 21 C 1.43204 * 125.89598 * 180.02562 * 20 19 18 22 22 N 9.96004 * 168.49565 * 254.23669 * 2 1 3 23 23 N 1.36727 * 108.21057 * 0.26695 * 20 19 18 24 24 H 0.96994 * 125.68583 * 179.73357 * 23 20 19 25 25 H 1.09004 * 109.47281 * 101.70727 * 3 2 1 26 26 H 1.09002 * 109.47660 * 341.70859 * 3 2 1 27 27 H 1.09003 * 109.47034 * 60.00448 * 4 3 2 28 28 H 1.08996 * 109.47288 * 300.00308 * 4 3 2 29 29 H 1.09001 * 109.46986 * 22.71478 * 6 5 4 30 30 H 1.08991 * 109.47402 * 142.71830 * 6 5 4 31 31 H 0.97009 * 119.99934 * 180.02562 * 10 9 7 32 32 H 1.08001 * 126.25633 * 0.02562 * 18 17 15 33 33 H 1.07995 * 126.24276 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1175 1.0778 0.9597 5 7 4.5825 1.0781 0.9602 6 6 5.3150 0.1555 1.8311 7 6 5.7216 0.8719 3.0931 8 1 5.4608 1.9107 3.2322 9 6 6.4264 0.2013 4.0700 10 7 6.7435 -1.0637 3.9008 11 14 6.9297 1.0892 5.6346 12 1 6.4549 2.4952 5.5804 13 1 6.3255 0.4071 6.8071 14 1 8.4094 1.0713 5.7597 15 6 5.2564 1.9271 0.1593 16 8 4.6483 2.7005 -0.5562 17 6 6.7270 1.9187 0.1504 18 6 7.5350 2.5867 -0.7470 19 6 8.8577 2.3134 -0.4035 20 6 8.8374 1.4828 0.6993 21 6 9.9850 0.9597 1.3776 22 7 10.8960 0.5396 1.9117 23 7 7.5325 1.2414 1.0285 24 1 7.2277 0.6854 1.7625 25 1 2.9713 0.2094 -1.0063 26 1 2.9719 -0.9749 0.3225 27 1 2.7544 0.8691 1.9660 28 1 2.7538 2.0533 0.6372 29 1 4.6758 -0.6906 2.0836 30 1 6.2050 -0.2030 1.3141 31 1 7.2391 -1.5357 4.5883 32 1 7.2030 3.2078 -1.5658 33 1 9.7379 2.6838 -0.9078 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000160560547.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:53:51 Heat of formation + Delta-G solvation = 76.996989 kcal Electronic energy + Delta-G solvation = -20141.137826 eV Core-core repulsion = 16975.659600 eV Total energy + Delta-G solvation = -3165.478226 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 272.101 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.14190 -38.90109 -36.75926 -36.07874 -35.66442 -33.46273 -31.70871 -30.49804 -29.25950 -27.72448 -24.80421 -23.68891 -22.28537 -20.49874 -19.90678 -18.09519 -17.65975 -16.97129 -16.62110 -15.64391 -14.96583 -14.85848 -14.78332 -14.31493 -14.10779 -13.58779 -13.31784 -13.17088 -12.80964 -12.76635 -12.60733 -12.37709 -12.34520 -12.25419 -11.93192 -11.79743 -11.47426 -11.30617 -11.03330 -10.83650 -10.52533 -10.17936 -9.65079 -9.07995 -8.69425 -8.29635 -7.86626 -6.68421 -4.83191 1.48104 2.50004 2.67248 2.77432 2.86237 2.98193 3.10211 3.12355 3.39861 3.67252 3.76718 3.82192 3.98794 4.24108 4.51026 4.66620 4.98625 5.18408 5.25319 5.52324 5.54300 5.70360 5.89671 6.07398 6.15508 6.25121 6.30752 6.57761 6.90506 7.01773 7.20421 7.30147 7.44002 7.62018 7.68225 7.80876 7.94010 8.32084 8.57892 8.90109 10.34043 Molecular weight = 272.10amu Principal moments of inertia in cm(-1) A = 0.013934 B = 0.007328 C = 0.005309 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2009.018980 B = 3819.835605 C = 5273.184329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.447 5.447 2 C 0.220 3.780 3 C -0.046 4.046 4 C 0.125 3.875 5 N -0.595 5.595 6 C 0.214 3.786 7 C -0.569 4.569 8 H 0.075 0.925 9 C 0.068 3.932 10 N -0.876 5.876 11 Si 0.895 3.105 12 H -0.265 1.265 13 H -0.275 1.275 14 H -0.277 1.277 15 C 0.589 3.411 16 O -0.548 6.548 17 C 0.007 3.993 18 C -0.137 4.137 19 C -0.142 4.142 20 C 0.067 3.933 21 C 0.286 3.714 22 N -0.416 5.416 23 N -0.482 5.482 24 H 0.455 0.545 25 H 0.111 0.889 26 H 0.113 0.887 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.056 0.944 30 H 0.038 0.962 31 H 0.275 0.725 32 H 0.152 0.848 33 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.396 2.260 -6.437 6.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.124 5.124 2 C -0.098 4.098 3 C -0.087 4.087 4 C 0.000 4.000 5 N -0.325 5.325 6 C 0.093 3.907 7 C -0.607 4.607 8 H 0.093 0.907 9 C -0.139 4.139 10 N -0.512 5.512 11 Si 0.720 3.280 12 H -0.189 1.189 13 H -0.200 1.200 14 H -0.202 1.202 15 C 0.378 3.622 16 O -0.427 6.427 17 C -0.115 4.115 18 C -0.163 4.163 19 C -0.170 4.170 20 C -0.054 4.054 21 C -0.029 4.029 22 N -0.093 5.093 23 N -0.093 5.093 24 H 0.316 0.684 25 H 0.129 0.871 26 H 0.131 0.869 27 H 0.108 0.892 28 H 0.109 0.891 29 H 0.074 0.926 30 H 0.056 0.944 31 H 0.085 0.915 32 H 0.170 0.830 33 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.256 1.656 -5.660 5.903 hybrid contribution 0.360 0.083 1.256 1.310 sum 0.104 1.738 -4.404 4.736 Atomic orbital electron populations 1.81198 1.13043 1.09075 1.09126 1.29051 0.95066 0.92854 0.92843 1.19771 0.81458 1.03476 1.04039 1.21189 0.80590 0.98758 0.99442 1.48036 1.05761 1.38005 1.40703 1.19888 0.92738 0.89470 0.88589 1.21694 1.37637 0.99081 1.02316 0.90659 1.25088 0.95119 0.94890 0.98823 1.69900 1.37105 1.08722 1.35430 0.86427 0.78861 0.80362 0.82306 1.18914 1.20033 1.20236 1.17158 0.84999 0.80260 0.79737 1.90764 1.68488 1.40415 1.43002 1.20481 0.90892 1.03492 0.96641 1.21070 0.91097 1.03088 1.00998 1.21064 0.97826 1.01343 0.96786 1.15836 0.81259 1.07745 1.00545 1.24445 0.92657 0.92960 0.92851 1.81235 1.10960 1.09036 1.08076 1.44434 1.03422 1.35570 1.25846 0.68397 0.87078 0.86930 0.89229 0.89140 0.92627 0.94422 0.91461 0.83024 0.83437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -6.91 18.54 42.16 0.78 -6.13 16 2 C 0.22 2.84 15.43 -20.76 -0.32 2.52 16 3 C -0.05 -0.51 6.02 -29.52 -0.18 -0.69 16 4 C 0.13 1.73 5.39 -4.04 -0.02 1.71 16 5 N -0.59 -9.91 2.48 -176.47 -0.44 -10.35 16 6 C 0.21 4.05 4.74 -5.19 -0.02 4.02 16 7 C -0.57 -12.30 7.26 -34.44 -0.25 -12.55 16 8 H 0.08 1.70 7.81 -52.48 -0.41 1.29 16 9 C 0.07 1.54 5.06 -17.82 -0.09 1.45 16 10 N -0.88 -20.68 13.29 55.43 0.74 -19.94 16 11 Si 0.89 18.66 29.54 -169.99 -5.02 13.64 16 12 H -0.27 -5.54 7.11 56.52 0.40 -5.13 16 13 H -0.27 -5.74 7.11 56.52 0.40 -5.33 16 14 H -0.28 -5.95 7.11 56.52 0.40 -5.55 16 15 C 0.59 10.43 7.59 -12.68 -0.10 10.33 16 16 O -0.55 -10.33 16.39 5.23 0.09 -10.24 16 17 C 0.01 0.12 6.61 -82.03 -0.54 -0.43 16 18 C -0.14 -2.01 10.61 -39.25 -0.42 -2.42 16 19 C -0.14 -1.95 10.80 -39.23 -0.42 -2.37 16 20 C 0.07 1.11 6.93 -83.82 -0.58 0.53 16 21 C 0.29 5.01 15.89 -22.45 -0.36 4.66 16 22 N -0.42 -7.83 18.54 41.86 0.78 -7.05 16 23 N -0.48 -8.72 4.80 -6.96 -0.03 -8.75 16 24 H 0.45 9.06 3.22 -40.82 -0.13 8.93 16 25 H 0.11 1.15 8.14 -51.93 -0.42 0.72 16 26 H 0.11 1.12 8.14 -51.93 -0.42 0.69 16 27 H 0.09 1.22 8.11 -51.93 -0.42 0.79 16 28 H 0.09 1.28 7.27 -51.93 -0.38 0.90 16 29 H 0.06 1.06 8.02 -51.93 -0.42 0.65 16 30 H 0.04 0.75 5.21 -51.93 -0.27 0.48 16 31 H 0.28 6.34 8.31 -40.82 -0.34 6.00 16 32 H 0.15 1.94 8.06 -52.49 -0.42 1.51 16 33 H 0.15 1.55 8.06 -52.49 -0.42 1.13 16 LS Contribution 307.59 15.07 4.64 4.64 Total: -1.00 -25.71 307.59 -4.63 -30.35 By element: Atomic # 1 Polarization: 9.94 SS G_CDS: -2.85 Total: 7.09 kcal Atomic # 6 Polarization: 10.06 SS G_CDS: -3.30 Total: 6.76 kcal Atomic # 7 Polarization: -54.05 SS G_CDS: 1.82 Total: -52.23 kcal Atomic # 8 Polarization: -10.33 SS G_CDS: 0.09 Total: -10.24 kcal Atomic # 14 Polarization: 18.66 SS G_CDS: -5.02 Total: 13.64 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -25.71 -4.63 -30.35 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000160560547.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.343 kcal (2) G-P(sol) polarization free energy of solvation -25.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.346 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.997 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds