Wall clock time and date at job start Mon Mar 30 2020 00:53:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 C 1.52998 * 109.47021 * 147.85122 * 3 2 1 5 5 N 1.46500 * 109.46865 * 180.02562 * 4 3 2 6 6 C 1.46500 * 119.99887 * 262.50287 * 5 4 3 7 7 C 1.50706 * 109.47480 * 270.00188 * 6 5 4 8 8 H 1.07997 * 119.99432 * 0.02562 * 7 6 5 9 9 C 1.37869 * 120.00029 * 179.97438 * 7 6 5 10 10 N 1.31517 * 120.00202 * 0.02562 * 9 7 6 11 11 Si 1.86804 * 119.99748 * 180.02562 * 9 7 6 12 12 H 1.48498 * 109.46965 * 359.97438 * 11 9 7 13 13 H 1.48503 * 109.47158 * 120.00201 * 11 9 7 14 14 H 1.48496 * 109.47154 * 240.00179 * 11 9 7 15 15 C 1.34777 * 120.00052 * 82.50698 * 5 4 3 16 16 O 1.21680 * 119.99755 * 182.44344 * 15 5 4 17 17 C 1.46789 * 120.00095 * 2.44444 * 15 5 4 18 18 C 1.36405 * 125.85212 * 169.20760 * 17 15 5 19 19 C 1.41273 * 107.03622 * 180.13155 * 18 17 15 20 20 C 1.43204 * 126.45359 * 179.83372 * 19 18 17 21 21 N 7.86428 * 113.03662 * 66.42567 * 2 1 3 22 22 C 1.38181 * 107.08992 * 359.56834 * 19 18 17 23 23 N 1.34430 * 108.38252 * 0.26823 * 22 19 18 24 24 H 0.97005 * 125.40053 * 180.02562 * 23 22 19 25 25 H 1.09004 * 109.46741 * 27.84984 * 3 2 1 26 26 H 1.08996 * 109.46827 * 267.85753 * 3 2 1 27 27 H 1.09001 * 109.46849 * 59.99933 * 4 3 2 28 28 H 1.08997 * 109.47126 * 300.00240 * 4 3 2 29 29 H 1.08999 * 109.47309 * 30.00164 * 6 5 4 30 30 H 1.09002 * 109.47270 * 150.00435 * 6 5 4 31 31 H 0.97001 * 119.99526 * 179.97438 * 10 9 7 32 32 H 1.08004 * 126.48376 * 359.96080 * 18 17 15 33 33 H 1.07998 * 125.80816 * 180.28595 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1174 1.2222 -0.7676 5 7 4.5824 1.2225 -0.7681 6 6 5.3151 2.0320 0.2087 7 6 5.5658 3.4038 -0.3626 8 1 5.2141 3.6483 -1.3541 9 6 6.2431 4.3469 0.3807 10 7 6.6709 4.0493 1.5882 11 14 6.5532 6.0476 -0.3273 12 1 5.9758 6.1279 -1.6931 13 1 5.9152 7.0693 0.5413 14 1 8.0155 6.2972 -0.3932 15 6 5.2561 0.4781 -1.6672 16 8 6.4721 0.4435 -1.6393 17 6 4.5230 -0.2908 -2.6801 18 6 5.0717 -0.9114 -3.7639 19 6 4.0129 -1.5260 -4.4689 20 6 4.1238 -2.2879 -5.6764 21 7 4.2134 -2.8944 -6.6331 22 6 2.8509 -1.2586 -3.7706 23 7 3.1640 -0.5150 -2.6954 24 1 2.5331 -0.1886 -2.0348 25 1 2.9717 -0.9079 -0.4801 26 1 2.9712 0.0392 1.0269 27 1 2.7536 2.1306 -0.2874 28 1 2.7541 1.1835 -1.7945 29 1 4.7263 2.1208 1.1217 30 1 6.2677 1.5534 0.4358 31 1 7.1477 4.7128 2.1110 32 1 6.1174 -0.9273 -4.0337 33 1 1.8598 -1.5907 -4.0423 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000177754489.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:53:54 Heat of formation + Delta-G solvation = 94.311601 kcal Electronic energy + Delta-G solvation = -19797.134917 eV Core-core repulsion = 16632.407509 eV Total energy + Delta-G solvation = -3164.727408 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 272.101 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.92915 -38.90087 -37.37475 -36.39673 -35.66961 -33.18107 -31.77800 -30.97172 -29.86922 -27.36874 -24.59443 -23.85372 -22.90154 -21.29224 -20.27577 -18.22600 -17.68713 -17.14575 -16.59279 -15.70585 -15.45871 -15.20332 -14.94962 -14.41917 -14.21592 -13.86317 -13.76702 -13.35488 -13.30739 -13.06830 -12.88179 -12.68064 -12.54597 -12.32190 -12.13041 -11.94938 -11.49875 -11.29824 -11.00786 -10.74888 -10.30714 -9.84455 -9.49601 -9.21427 -8.57378 -8.50455 -8.07921 -6.19195 -4.24703 1.37958 1.77358 2.36123 2.41398 2.66234 2.86516 3.22590 3.24464 3.31805 3.36026 3.46341 3.64842 3.85243 4.15364 4.33693 4.46138 4.63006 4.71032 4.73349 4.93121 5.11238 5.17289 5.41183 5.51477 5.69602 5.84206 6.30941 6.48928 6.76639 6.97208 7.13573 7.19020 7.25817 7.59738 7.76397 7.96413 8.03626 8.59074 8.81017 9.41820 10.88932 Molecular weight = 272.10amu Principal moments of inertia in cm(-1) A = 0.015900 B = 0.005447 C = 0.004417 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1760.586929 B = 5139.049681 C = 6337.962274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.421 5.421 2 C 0.201 3.799 3 C -0.073 4.073 4 C 0.097 3.903 5 N -0.592 5.592 6 C 0.244 3.756 7 C -0.534 4.534 8 H 0.060 0.940 9 C 0.065 3.935 10 N -0.891 5.891 11 Si 0.898 3.102 12 H -0.273 1.273 13 H -0.283 1.283 14 H -0.282 1.282 15 C 0.579 3.421 16 O -0.510 6.510 17 C -0.033 4.033 18 C -0.065 4.065 19 C -0.134 4.134 20 C 0.295 3.705 21 N -0.445 5.445 22 C 0.077 3.923 23 N -0.537 5.537 24 H 0.428 0.572 25 H 0.110 0.890 26 H 0.134 0.866 27 H 0.112 0.888 28 H 0.076 0.924 29 H 0.039 0.961 30 H 0.052 0.948 31 H 0.265 0.735 32 H 0.160 0.840 33 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.986 -8.291 -3.873 12.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.098 5.098 2 C -0.118 4.118 3 C -0.115 4.115 4 C -0.030 4.030 5 N -0.323 5.323 6 C 0.126 3.874 7 C -0.573 4.573 8 H 0.079 0.921 9 C -0.138 4.138 10 N -0.530 5.530 11 Si 0.725 3.275 12 H -0.197 1.197 13 H -0.210 1.210 14 H -0.208 1.208 15 C 0.365 3.635 16 O -0.385 6.385 17 C -0.144 4.144 18 C -0.092 4.092 19 C -0.145 4.145 20 C -0.019 4.019 21 N -0.121 5.121 22 C -0.067 4.067 23 N -0.143 5.143 24 H 0.278 0.722 25 H 0.128 0.872 26 H 0.152 0.848 27 H 0.130 0.870 28 H 0.093 0.907 29 H 0.057 0.943 30 H 0.070 0.930 31 H 0.074 0.926 32 H 0.178 0.822 33 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges -9.822 -9.032 -4.955 14.233 hybrid contribution 0.196 1.388 0.372 1.450 sum -9.625 -7.644 -4.583 13.118 Atomic orbital electron populations 1.81277 1.12615 1.07973 1.07962 1.28997 0.94971 0.93764 0.94036 1.20253 0.81855 1.01924 1.07452 1.21707 0.83439 0.98216 0.99652 1.48178 1.04196 1.45370 1.34553 1.19486 0.92798 0.89393 0.85724 1.21432 1.37200 0.96521 1.02113 0.92130 1.24907 0.95108 0.99017 0.94791 1.69922 1.37977 1.35055 1.10039 0.86444 0.78238 0.83638 0.79136 1.19724 1.20958 1.20770 1.16989 0.86927 0.79236 0.80348 1.90866 1.12230 1.63966 1.71395 1.20579 0.82076 1.09423 1.02348 1.21041 0.99199 0.96386 0.92560 1.15418 0.94466 1.09683 0.94951 1.24719 0.93350 0.92106 0.91764 1.81265 1.07656 1.11473 1.11719 1.22293 0.99057 0.96692 0.88673 1.43449 1.08668 1.40047 1.22093 0.72243 0.87226 0.84830 0.86959 0.90657 0.94341 0.92956 0.92577 0.82231 0.79962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -4.93 18.54 42.15 0.78 -4.15 16 2 C 0.20 1.83 14.89 -20.76 -0.31 1.52 16 3 C -0.07 -0.58 5.00 -29.52 -0.15 -0.73 16 4 C 0.10 1.08 4.90 -4.04 -0.02 1.06 16 5 N -0.59 -9.73 2.48 -176.56 -0.44 -10.17 16 6 C 0.24 5.32 5.15 -5.19 -0.03 5.29 16 7 C -0.53 -13.39 9.39 -34.44 -0.32 -13.72 16 8 H 0.06 1.53 7.81 -52.49 -0.41 1.12 16 9 C 0.06 1.68 5.46 -17.82 -0.10 1.59 16 10 N -0.89 -24.25 13.29 55.43 0.74 -23.52 16 11 Si 0.90 20.33 29.54 -169.99 -5.02 15.31 16 12 H -0.27 -6.12 7.11 56.52 0.40 -5.71 16 13 H -0.28 -6.32 7.11 56.52 0.40 -5.91 16 14 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 15 C 0.58 9.93 7.58 -12.80 -0.10 9.83 16 16 O -0.51 -11.04 16.44 5.21 0.09 -10.96 16 17 C -0.03 -0.42 6.42 -82.41 -0.53 -0.95 16 18 C -0.07 -0.81 10.55 -39.09 -0.41 -1.22 16 19 C -0.13 -1.42 5.97 -106.84 -0.64 -2.06 16 20 C 0.30 3.57 15.83 -22.46 -0.36 3.22 16 21 N -0.44 -6.32 18.54 41.85 0.78 -5.54 16 22 C 0.08 0.61 11.90 -16.43 -0.20 0.41 16 23 N -0.54 -4.86 4.11 -9.28 -0.04 -4.89 16 24 H 0.43 3.25 2.99 -40.82 -0.12 3.12 16 25 H 0.11 0.74 6.46 -51.93 -0.34 0.41 16 26 H 0.13 1.00 8.14 -51.93 -0.42 0.58 16 27 H 0.11 1.29 8.02 -51.93 -0.42 0.88 16 28 H 0.08 0.72 5.11 -51.93 -0.27 0.45 16 29 H 0.04 0.82 8.07 -51.93 -0.42 0.40 16 30 H 0.05 1.31 7.39 -51.93 -0.38 0.93 16 31 H 0.26 6.85 8.31 -40.82 -0.34 6.51 16 32 H 0.16 1.97 8.06 -52.48 -0.42 1.55 16 33 H 0.18 0.79 8.06 -52.49 -0.42 0.36 16 LS Contribution 305.70 15.07 4.61 4.61 Total: -1.00 -32.03 305.70 -4.42 -36.44 By element: Atomic # 1 Polarization: 1.38 SS G_CDS: -2.75 Total: -1.37 kcal Atomic # 6 Polarization: 7.39 SS G_CDS: -3.15 Total: 4.24 kcal Atomic # 7 Polarization: -50.09 SS G_CDS: 1.82 Total: -48.28 kcal Atomic # 8 Polarization: -11.04 SS G_CDS: 0.09 Total: -10.96 kcal Atomic # 14 Polarization: 20.33 SS G_CDS: -5.02 Total: 15.31 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -32.03 -4.42 -36.44 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000177754489.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.755 kcal (2) G-P(sol) polarization free energy of solvation -32.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.417 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.444 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.312 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds