Wall clock time and date at job start Mon Mar 30 2020 01:33:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 N 1.28516 * 124.43651 * 2 1 4 4 C 1.31134 * 109.05903 * 179.97438 * 3 2 1 5 5 C 1.40937 * 105.77436 * 0.02562 * 4 3 2 6 6 C 1.47767 * 127.24037 * 179.97438 * 5 4 3 7 7 O 1.21575 * 119.99824 * 359.97438 * 6 5 4 8 8 N 1.34780 * 120.00362 * 179.97438 * 6 5 4 9 9 C 1.39868 * 119.99874 * 185.09063 * 8 6 5 10 10 C 1.39308 * 119.94928 * 33.31592 * 9 8 6 11 11 C 1.38483 * 120.42399 * 180.27557 * 10 9 8 12 12 C 1.37688 * 120.32346 * 359.44611 * 11 10 9 13 13 C 1.40749 * 119.89054 * 0.27652 * 12 11 10 14 14 C 1.41398 * 120.21145 * 179.97438 * 13 12 11 15 15 H 1.08006 * 120.00577 * 29.19473 * 14 13 12 16 16 C 1.39938 * 119.99885 * 209.20174 * 14 13 12 17 17 N 1.30828 * 120.00025 * 15.61221 * 16 14 13 18 18 Si 1.86797 * 119.99726 * 195.61375 * 16 14 13 19 19 H 1.48509 * 109.47135 * 90.00104 * 18 16 14 20 20 H 1.48501 * 109.46994 * 209.99719 * 18 16 14 21 21 H 1.48500 * 109.47377 * 329.99883 * 18 16 14 22 22 C 1.38259 * 119.94683 * 213.03624 * 9 8 6 23 23 N 1.28591 * 124.44358 * 180.22960 * 2 1 3 24 24 H 1.09003 * 109.47124 * 90.02863 * 1 2 3 25 25 H 1.08999 * 109.46849 * 210.02376 * 1 2 3 26 26 H 1.08996 * 109.47305 * 330.02107 * 1 2 3 27 27 H 1.07999 * 127.11245 * 179.97438 * 4 3 2 28 28 H 0.96997 * 119.99473 * 5.08829 * 8 6 5 29 29 H 1.08000 * 119.79064 * 0.02562 * 10 9 8 30 30 H 1.07997 * 119.84091 * 179.72429 * 11 10 9 31 31 H 1.08004 * 120.05767 * 180.25140 * 12 11 10 32 32 H 0.96998 * 119.99413 * 180.02562 * 17 16 14 33 33 H 1.08006 * 120.16041 * 0.03277 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.1918 1.0599 0.0000 4 6 3.4562 0.7122 0.0006 5 6 3.4660 -0.6971 0.0003 6 6 4.6485 -1.5832 0.0002 7 8 5.7663 -1.1051 -0.0001 8 7 4.4880 -2.9214 0.0005 9 6 5.6027 -3.7594 0.1079 10 6 6.7015 -3.3615 0.8661 11 6 7.8126 -4.1809 0.9745 12 6 7.8386 -5.4040 0.3426 13 6 6.7335 -5.8220 -0.4222 14 6 6.7532 -7.0764 -1.0744 15 1 7.3270 -7.8920 -0.6595 16 6 6.0293 -7.2612 -2.2577 17 7 5.5901 -6.2249 -2.9245 18 14 5.6900 -8.9877 -2.8849 19 1 4.4083 -9.4778 -2.3170 20 1 5.5988 -8.9669 -4.3670 21 1 6.7930 -9.8910 -2.4695 22 6 5.6099 -4.9840 -0.5340 23 7 2.1924 -1.0605 -0.0042 24 1 -0.3633 -0.0005 -1.0277 25 1 -0.3633 -0.8898 0.5142 26 1 -0.3634 0.8901 0.5135 27 1 4.3129 1.3698 0.0003 28 1 3.5994 -3.3032 -0.0738 29 1 6.6884 -2.4060 1.3694 30 1 8.6610 -3.8611 1.5611 31 1 8.7057 -6.0414 0.4334 32 1 5.0880 -6.3531 -3.7445 33 1 4.7569 -5.2952 -1.1188 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000313494505.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:33:40 Heat of formation + Delta-G solvation = 98.821959 kcal Electronic energy + Delta-G solvation = -19561.983167 eV Core-core repulsion = 16397.451343 eV Total energy + Delta-G solvation = -3164.531824 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 272.101 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -43.69291 -39.51350 -37.15791 -34.31824 -33.91923 -33.30969 -32.61106 -29.57164 -28.85906 -27.76448 -25.23319 -24.21238 -22.14517 -21.36672 -21.00457 -19.57248 -17.85509 -17.33253 -17.08166 -16.86224 -15.63214 -15.00372 -14.80838 -14.80285 -14.35273 -14.01821 -13.34729 -13.19699 -12.99373 -12.78266 -12.35002 -11.97086 -11.72855 -11.25188 -11.10774 -11.08229 -10.78854 -10.51640 -10.46730 -10.11403 -9.90637 -9.54164 -9.47567 -9.27036 -8.94351 -7.34868 -6.96042 -6.69628 -4.36131 1.30521 1.90341 2.05360 2.76482 2.90562 3.09244 3.12714 3.22817 3.48843 3.66857 3.93040 3.96376 4.67239 4.70160 4.72557 4.92284 4.96558 5.18392 5.61284 5.66981 5.92493 6.26741 6.40812 6.62812 6.67689 6.87756 7.04014 7.07441 7.24873 7.58545 7.66784 7.91384 7.99799 8.03481 8.16887 8.31918 8.52702 8.71654 8.90455 8.95854 10.24922 Molecular weight = 272.10amu Principal moments of inertia in cm(-1) A = 0.021798 B = 0.004544 C = 0.003901 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1284.196862 B = 6160.796609 C = 7175.803575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.105 3.895 2 N -0.148 5.148 3 N -0.295 5.295 4 C 0.034 3.966 5 C -0.036 4.036 6 C 0.600 3.400 7 O -0.511 6.511 8 N -0.645 5.645 9 C 0.143 3.857 10 C -0.224 4.224 11 C -0.086 4.086 12 C -0.223 4.223 13 C 0.123 3.877 14 C -0.469 4.469 15 H 0.079 0.921 16 C 0.077 3.923 17 N -0.800 5.800 18 Si 0.907 3.093 19 H -0.269 1.269 20 H -0.279 1.279 21 H -0.263 1.263 22 C -0.175 4.175 23 N -0.251 5.251 24 H 0.092 0.908 25 H 0.105 0.895 26 H 0.104 0.896 27 H 0.209 0.791 28 H 0.407 0.593 29 H 0.104 0.896 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.279 0.721 33 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.141 8.692 3.606 14.583 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.035 4.035 2 N -0.051 5.051 3 N -0.135 5.135 4 C -0.149 4.149 5 C -0.199 4.199 6 C 0.383 3.617 7 O -0.384 6.384 8 N -0.288 5.288 9 C 0.051 3.949 10 C -0.245 4.245 11 C -0.105 4.105 12 C -0.243 4.243 13 C 0.120 3.880 14 C -0.499 4.499 15 H 0.097 0.903 16 C -0.140 4.140 17 N -0.426 5.426 18 Si 0.732 3.268 19 H -0.194 1.194 20 H -0.204 1.204 21 H -0.187 1.187 22 C -0.196 4.196 23 N -0.100 5.100 24 H 0.111 0.889 25 H 0.124 0.876 26 H 0.123 0.877 27 H 0.226 0.774 28 H 0.242 0.758 29 H 0.122 0.878 30 H 0.111 0.889 31 H 0.113 0.887 32 H 0.090 0.910 33 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -11.852 9.121 3.389 15.335 hybrid contribution 0.145 -0.842 -0.585 1.035 sum -11.707 8.280 2.804 14.610 Atomic orbital electron populations 1.22217 0.69866 1.06098 1.05270 1.48021 1.09155 0.99326 1.48598 1.73981 1.03907 1.15514 1.20067 1.24846 0.94191 0.93737 1.02143 1.23246 0.91278 0.94965 1.10432 1.16625 0.85865 0.81693 0.77530 1.90827 1.23373 1.75096 1.49082 1.43251 1.10281 1.04750 1.70544 1.17601 0.87361 0.91226 0.98719 1.20342 0.95686 1.01345 1.07144 1.20432 0.96357 0.94587 0.99132 1.21093 0.98652 0.97192 1.07364 1.17345 0.89124 0.92244 0.89258 1.19509 1.26575 0.97347 1.06453 0.90306 1.25863 0.93528 0.98444 0.96189 1.69828 1.27931 1.31338 1.13460 0.86332 0.79792 0.82703 0.77969 1.19397 1.20443 1.18658 1.20984 1.00396 0.94737 1.03529 1.74412 1.03177 1.15550 1.16859 0.88929 0.87613 0.87706 0.77442 0.75819 0.87811 0.88856 0.88724 0.91034 0.86375 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 0.64 11.55 59.85 0.69 1.33 16 2 N -0.15 -1.78 4.35 -16.63 -0.07 -1.85 16 3 N -0.29 -3.85 12.01 30.90 0.37 -3.48 16 4 C 0.03 0.48 12.04 -16.83 -0.20 0.28 16 5 C -0.04 -0.58 7.21 -82.69 -0.60 -1.18 16 6 C 0.60 11.71 7.56 -12.36 -0.09 11.61 16 7 O -0.51 -11.32 14.62 5.30 0.08 -11.24 16 8 N -0.65 -13.03 5.33 -10.78 -0.06 -13.08 16 9 C 0.14 3.40 6.27 -83.79 -0.53 2.87 16 10 C -0.22 -5.35 8.66 -39.09 -0.34 -5.69 16 11 C -0.09 -2.01 10.02 -39.69 -0.40 -2.41 16 12 C -0.22 -5.54 9.79 -38.83 -0.38 -5.92 16 13 C 0.12 3.28 5.52 -106.85 -0.59 2.69 16 14 C -0.47 -12.38 9.04 -37.74 -0.34 -12.72 16 15 H 0.08 2.00 7.89 -52.48 -0.41 1.58 16 16 C 0.08 1.92 5.15 -17.34 -0.09 1.83 16 17 N -0.80 -20.83 11.15 55.55 0.62 -20.21 16 18 Si 0.91 18.65 29.59 -169.99 -5.03 13.63 16 19 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 20 H -0.28 -5.65 7.11 56.52 0.40 -5.25 16 21 H -0.26 -5.34 7.11 56.52 0.40 -4.94 16 22 C -0.17 -4.50 8.57 -38.68 -0.33 -4.83 16 23 N -0.25 -3.65 11.85 33.42 0.40 -3.26 16 24 H 0.09 0.42 8.14 -51.93 -0.42 0.00 16 25 H 0.11 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.10 0.42 8.14 -51.93 -0.42 0.00 16 27 H 0.21 2.39 8.06 -52.49 -0.42 1.96 16 28 H 0.41 7.25 8.59 -40.82 -0.35 6.90 16 29 H 0.10 2.42 6.39 -52.49 -0.34 2.08 16 30 H 0.09 1.90 8.06 -52.49 -0.42 1.48 16 31 H 0.09 2.19 8.06 -52.48 -0.42 1.77 16 32 H 0.28 6.65 8.30 -40.82 -0.34 6.31 16 33 H 0.12 3.08 6.44 -52.48 -0.34 2.75 16 LS Contribution 297.78 15.07 4.49 4.49 Total: -1.00 -31.96 297.78 -5.51 -37.47 By element: Atomic # 1 Polarization: 12.78 SS G_CDS: -3.11 Total: 9.67 kcal Atomic # 6 Polarization: -8.93 SS G_CDS: -3.19 Total: -12.13 kcal Atomic # 7 Polarization: -43.14 SS G_CDS: 1.26 Total: -41.89 kcal Atomic # 8 Polarization: -11.32 SS G_CDS: 0.08 Total: -11.24 kcal Atomic # 14 Polarization: 18.65 SS G_CDS: -5.03 Total: 13.63 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -31.96 -5.51 -37.47 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000313494505.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.290 kcal (2) G-P(sol) polarization free energy of solvation -31.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.332 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.468 kcal (6) G-S(sol) free energy of system = (1) + (5) 98.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds