Wall clock time and date at job start Mon Mar 30 2020 01:01:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38491 * 120.09711 * 2 1 4 4 N 1.39831 * 120.01094 * 359.97438 * 3 2 1 5 5 C 1.39288 * 119.98150 * 180.30130 * 3 2 1 6 6 F 1.35101 * 119.91036 * 179.67776 * 5 3 2 7 7 C 1.38489 * 120.17977 * 359.70579 * 5 3 2 8 8 C 1.37935 * 120.19362 * 0.02562 * 7 5 3 9 9 C 1.39575 * 120.09672 * 179.75233 * 2 1 3 10 10 C 1.47917 * 120.09018 * 359.97438 * 9 2 1 11 11 C 1.40296 * 120.35233 * 129.70403 * 10 9 2 12 12 C 1.36652 * 118.60542 * 180.02562 * 11 10 9 13 13 C 1.40892 * 119.25996 * 359.97438 * 12 11 10 14 14 C 1.40955 * 119.67951 * 180.02562 * 13 12 11 15 15 H 1.08000 * 119.99941 * 359.97438 * 14 13 12 16 16 C 1.40083 * 120.00284 * 180.02562 * 14 13 12 17 17 N 1.30724 * 119.99612 * 359.97438 * 16 14 13 18 18 Si 1.86802 * 120.00443 * 179.97438 * 16 14 13 19 19 H 1.48496 * 109.46713 * 0.02562 * 18 16 14 20 20 H 1.48496 * 109.46872 * 119.99832 * 18 16 14 21 21 H 1.48494 * 109.47119 * 239.99903 * 18 16 14 22 22 N 1.33787 * 120.63793 * 0.02562 * 13 12 11 23 23 C 1.31179 * 121.51052 * 359.97438 * 22 13 12 24 24 H 1.09006 * 109.46693 * 270.25253 * 1 2 3 25 25 H 1.09004 * 109.47363 * 30.24671 * 1 2 3 26 26 H 1.08998 * 109.47312 * 150.25195 * 1 2 3 27 27 H 0.97002 * 120.00544 * 180.29709 * 4 3 2 28 28 H 0.97000 * 120.00354 * 0.30198 * 4 3 2 29 29 H 1.07998 * 119.90134 * 179.97438 * 7 5 3 30 30 H 1.08004 * 119.99046 * 179.97438 * 8 7 5 31 31 H 1.07999 * 120.69555 * 0.04093 * 11 10 9 32 32 H 1.08004 * 120.36678 * 179.97438 * 12 11 10 33 33 H 0.97002 * 120.00174 * 180.02562 * 17 16 14 34 34 H 1.08003 * 119.65813 * 180.27945 * 23 22 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2015 1.1982 0.0000 4 7 1.5046 2.4105 -0.0005 5 6 3.5944 1.1954 -0.0063 6 9 4.2704 2.3651 -0.0129 7 6 4.2882 -0.0032 -0.0065 8 6 3.6039 -1.2008 -0.0009 9 6 2.2069 -1.2076 0.0052 10 6 1.4715 -2.4910 0.0113 11 6 1.7898 -3.4948 -0.9157 12 6 1.0872 -4.6663 -0.8784 13 6 0.0714 -4.8298 0.0842 14 6 -0.6584 -6.0348 0.1309 15 1 -0.4381 -6.8271 -0.5692 16 6 -1.6702 -6.2044 1.0848 17 7 -1.9372 -5.2452 1.9319 18 14 -2.6379 -7.8010 1.1463 19 1 -2.1449 -8.7196 0.0888 20 1 -2.4594 -8.4370 2.4763 21 1 -4.0780 -7.5159 0.9232 22 7 -0.2071 -3.8524 0.9542 23 6 0.4497 -2.7169 0.9431 24 1 -0.3633 0.0045 1.0277 25 1 -0.3634 0.8878 -0.5177 26 1 -0.3634 -0.8922 -0.5099 27 1 1.9911 3.2497 -0.0049 28 1 0.5346 2.4124 0.0035 29 1 5.3681 -0.0001 -0.0119 30 1 4.1483 -2.1336 -0.0015 31 1 2.5736 -3.3449 -1.6433 32 1 1.3083 -5.4581 -1.5789 33 1 -2.6375 -5.3627 2.5927 34 1 0.2030 -1.9498 1.6623 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245462095.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:01:29 Heat of formation + Delta-G solvation = 1.512294 kcal Electronic energy + Delta-G solvation = -19718.099718 eV Core-core repulsion = 16529.428269 eV Total energy + Delta-G solvation = -3188.671450 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 272.102 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.44097 -39.31610 -37.85900 -34.61345 -33.76563 -32.20087 -30.83429 -29.83625 -28.04083 -26.64212 -25.41992 -22.26736 -21.83869 -21.04587 -20.28801 -17.61805 -17.32446 -16.85042 -16.16567 -15.66717 -15.26844 -14.83221 -14.47765 -14.37903 -13.98509 -13.39278 -13.09348 -12.97935 -12.67050 -12.37912 -12.15146 -11.88527 -11.62117 -11.52594 -11.27077 -11.09697 -10.85374 -10.67908 -10.46519 -10.37385 -9.98511 -9.49438 -8.49861 -8.19756 -7.65792 -7.47247 -7.14548 -6.54503 -4.63410 1.53509 1.84750 2.65819 3.01380 3.02349 3.05532 3.09760 3.83060 3.97381 4.11952 4.62633 4.65187 5.15360 5.40103 5.54521 5.63919 5.78078 5.91468 5.96675 6.06076 6.10197 6.12489 6.41437 6.49128 6.60633 6.65961 6.73079 6.78671 6.97924 7.07626 7.17316 7.30434 7.53123 7.62019 7.72655 7.85151 7.93031 8.09338 8.50197 8.79194 9.98729 10.15287 Molecular weight = 272.10amu Principal moments of inertia in cm(-1) A = 0.040156 B = 0.004143 C = 0.003883 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 697.106997 B = 6756.311166 C = 7209.072153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.148 4.148 3 C 0.192 3.808 4 N -0.879 5.879 5 C -0.016 4.016 6 F -0.156 7.156 7 C -0.108 4.108 8 C -0.154 4.154 9 C 0.060 3.940 10 C -0.278 4.278 11 C -0.032 4.032 12 C -0.274 4.274 13 C 0.253 3.747 14 C -0.415 4.415 15 H 0.087 0.913 16 C 0.065 3.935 17 N -0.703 5.703 18 Si 0.909 3.091 19 H -0.259 1.259 20 H -0.271 1.271 21 H -0.271 1.271 22 N -0.488 5.488 23 C 0.159 3.841 24 H 0.065 0.935 25 H 0.048 0.952 26 H 0.079 0.921 27 H 0.396 0.604 28 H 0.399 0.601 29 H 0.124 0.876 30 H 0.124 0.876 31 H 0.097 0.903 32 H 0.100 0.900 33 H 0.275 0.725 34 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.810 8.316 -2.030 9.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.153 4.153 3 C 0.088 3.912 4 N -0.420 5.420 5 C -0.039 4.039 6 F -0.135 7.135 7 C -0.127 4.127 8 C -0.174 4.174 9 C 0.058 3.942 10 C -0.283 4.283 11 C -0.056 4.056 12 C -0.297 4.297 13 C 0.130 3.870 14 C -0.445 4.445 15 H 0.105 0.895 16 C -0.161 4.161 17 N -0.323 5.323 18 Si 0.733 3.267 19 H -0.182 1.182 20 H -0.197 1.197 21 H -0.197 1.197 22 N -0.200 5.200 23 C -0.010 4.010 24 H 0.083 0.917 25 H 0.067 0.933 26 H 0.098 0.902 27 H 0.223 0.777 28 H 0.229 0.771 29 H 0.142 0.858 30 H 0.142 0.858 31 H 0.115 0.885 32 H 0.118 0.882 33 H 0.087 0.913 34 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 3.010 8.150 -1.257 8.779 hybrid contribution 0.344 0.090 -0.579 0.680 sum 3.354 8.240 -1.836 9.084 Atomic orbital electron populations 1.20623 0.90886 1.02273 1.01862 1.19352 0.95961 0.90141 1.09828 1.17414 0.89221 0.87203 0.97377 1.42363 1.08950 1.04745 1.85983 1.17062 0.87916 0.81497 1.17464 1.91360 1.80154 1.46564 1.95405 1.20727 0.99670 0.90928 1.01357 1.20940 0.93603 0.96794 1.06087 1.18599 0.91882 0.91887 0.91847 1.18945 1.07187 0.95047 1.07156 1.20580 0.96573 0.92626 0.95809 1.21403 1.04112 0.98650 1.05492 1.18649 0.89099 0.92117 0.87110 1.19762 1.12650 0.99231 1.12819 0.89528 1.26160 0.97231 0.98035 0.94723 1.70133 1.21807 1.30360 1.10025 0.86234 0.79545 0.81559 0.79363 1.18249 1.19654 1.19659 1.68811 1.26757 0.99970 1.24461 1.22739 0.89507 0.94902 0.93832 0.91666 0.93285 0.90212 0.77659 0.77058 0.85755 0.85815 0.88528 0.88227 0.91346 0.86263 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.55 8.01 36.01 0.29 -1.27 16 2 C -0.15 -2.51 5.90 -104.03 -0.61 -3.12 16 3 C 0.19 2.99 6.74 -83.72 -0.56 2.43 16 4 N -0.88 -10.69 8.99 32.44 0.29 -10.40 16 5 C -0.02 -0.25 7.32 -39.10 -0.29 -0.54 16 6 F -0.16 -2.38 16.63 2.25 0.04 -2.35 16 7 C -0.11 -1.66 10.00 -39.60 -0.40 -2.06 16 8 C -0.15 -2.60 9.53 -39.15 -0.37 -2.97 16 9 C 0.06 1.11 5.49 -104.89 -0.58 0.53 16 10 C -0.28 -5.90 4.74 -104.45 -0.50 -6.39 16 11 C -0.03 -0.70 9.59 -39.38 -0.38 -1.08 16 12 C -0.27 -6.42 9.76 -39.15 -0.38 -6.81 16 13 C 0.25 6.62 6.55 -84.98 -0.56 6.06 16 14 C -0.41 -10.57 9.12 -37.86 -0.35 -10.91 16 15 H 0.09 2.06 7.85 -52.49 -0.41 1.65 16 16 C 0.07 1.58 5.50 -17.33 -0.10 1.49 16 17 N -0.70 -17.86 11.44 55.55 0.64 -17.23 16 18 Si 0.91 17.65 29.56 -169.99 -5.03 12.62 16 19 H -0.26 -4.93 7.11 56.52 0.40 -4.53 16 20 H -0.27 -5.21 7.11 56.52 0.40 -4.81 16 21 H -0.27 -5.20 7.11 56.52 0.40 -4.79 16 22 N -0.49 -12.83 7.83 -10.84 -0.08 -12.92 16 23 C 0.16 3.66 9.09 -17.12 -0.16 3.50 16 24 H 0.06 0.98 7.52 -51.93 -0.39 0.59 16 25 H 0.05 0.63 6.56 -51.93 -0.34 0.29 16 26 H 0.08 1.43 6.47 -51.93 -0.34 1.10 16 27 H 0.40 4.22 8.31 -40.82 -0.34 3.88 16 28 H 0.40 4.19 6.82 -40.82 -0.28 3.91 16 29 H 0.12 1.61 8.06 -52.49 -0.42 1.19 16 30 H 0.12 1.98 8.05 -52.48 -0.42 1.56 16 31 H 0.10 1.83 8.06 -52.49 -0.42 1.41 16 32 H 0.10 2.15 8.06 -52.48 -0.42 1.73 16 33 H 0.28 6.29 8.29 -40.82 -0.34 5.95 16 34 H 0.12 2.55 6.90 -52.48 -0.36 2.19 16 LS Contribution 294.06 15.07 4.43 4.43 Total: -1.00 -27.73 294.06 -7.93 -35.65 By element: Atomic # 1 Polarization: 14.59 SS G_CDS: -3.28 Total: 11.30 kcal Atomic # 6 Polarization: -16.20 SS G_CDS: -4.93 Total: -21.13 kcal Atomic # 7 Polarization: -41.38 SS G_CDS: 0.84 Total: -40.54 kcal Atomic # 9 Polarization: -2.38 SS G_CDS: 0.04 Total: -2.35 kcal Atomic # 14 Polarization: 17.65 SS G_CDS: -5.03 Total: 12.62 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -27.73 -7.93 -35.65 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245462095.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.165 kcal (2) G-P(sol) polarization free energy of solvation -27.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.653 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds