Wall clock time and date at job start Mon Mar 30 2020 01:49:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38135 * 120.03160 * 2 1 4 4 C 1.38353 * 120.06262 * 179.97438 * 3 2 1 5 5 Cl 1.73597 * 119.94030 * 179.97438 * 4 3 2 6 6 C 1.38405 * 120.12618 * 359.67984 * 4 3 2 7 7 C 1.38085 * 120.05894 * 0.59688 * 6 4 3 8 8 C 1.38875 * 120.03391 * 179.97438 * 2 1 3 9 9 N 1.39739 * 120.05778 * 0.02562 * 8 2 1 10 10 S 1.65606 * 120.00074 * 146.44503 * 9 8 2 11 11 O 1.42099 * 106.40214 * 181.26639 * 10 9 8 12 12 O 1.42102 * 106.39980 * 314.19229 * 10 9 8 13 13 C 1.76204 * 107.21675 * 67.72691 * 10 9 8 14 14 H 1.08007 * 120.00001 * 0.02562 * 13 10 9 15 15 C 1.37874 * 119.99998 * 179.97438 * 13 10 9 16 16 N 1.31513 * 119.99928 * 0.02562 * 15 13 10 17 17 Si 1.86807 * 119.99898 * 180.02562 * 15 13 10 18 18 H 1.48493 * 109.47041 * 60.00500 * 17 15 13 19 19 H 1.48501 * 109.46726 * 180.02562 * 17 15 13 20 20 H 1.48503 * 109.46948 * 300.00318 * 17 15 13 21 21 H 1.08994 * 109.47435 * 270.02335 * 1 2 3 22 22 H 1.09000 * 109.47136 * 30.02617 * 1 2 3 23 23 H 1.09003 * 109.46989 * 150.01937 * 1 2 3 24 24 H 1.07997 * 119.96947 * 359.97367 * 3 2 1 25 25 H 1.08004 * 119.97479 * 180.29748 * 6 4 3 26 26 H 1.08000 * 120.03849 * 179.69876 * 7 6 4 27 27 H 0.96996 * 120.00338 * 326.44350 * 9 8 2 28 28 H 0.97006 * 119.99931 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1983 1.1959 0.0000 4 6 3.5818 1.1967 0.0005 5 17 4.4474 2.7014 -0.0001 6 6 4.2771 0.0000 0.0078 7 6 3.5913 -1.1985 0.0020 8 6 2.2020 -1.2023 0.0005 9 7 1.5053 -2.4136 0.0005 10 16 2.1287 -3.7275 -0.7916 11 8 1.1845 -4.7773 -0.6323 12 8 2.5654 -3.2607 -2.0608 13 6 3.5767 -4.2239 0.0810 14 1 3.8898 -3.6810 0.9607 15 6 4.3095 -5.3060 -0.3585 16 7 3.9280 -5.9672 -1.4293 17 14 5.8443 -5.8327 0.5672 18 1 5.4831 -6.1873 1.9632 19 1 6.4463 -7.0127 -0.1038 20 1 6.8236 -4.7164 0.5775 21 1 -0.3634 0.0004 1.0276 22 1 -0.3633 0.8897 -0.5142 23 1 -0.3633 -0.8902 -0.5135 24 1 1.6583 2.1312 -0.0004 25 1 5.3571 0.0034 0.0130 26 1 4.1342 -2.1321 0.0027 27 1 0.6565 -2.4849 0.4645 28 1 4.4437 -6.7283 -1.7387 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044509577.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:49:27 Heat of formation + Delta-G solvation = -82.152400 kcal Electronic energy + Delta-G solvation = -17094.568432 eV Core-core repulsion = 14069.353006 eV Total energy + Delta-G solvation = -3025.215426 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 275.017 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -39.45833 -36.46203 -35.43533 -34.31387 -34.16804 -33.24887 -32.45713 -28.78548 -26.67074 -26.36350 -22.45872 -21.23479 -19.07351 -17.89602 -17.35747 -16.39912 -15.97158 -15.29513 -14.79160 -14.17625 -14.09594 -13.81961 -13.45765 -13.01908 -12.63792 -12.55814 -12.18978 -11.86549 -11.61067 -11.43160 -11.28727 -11.10966 -10.75737 -10.70862 -10.50795 -10.49135 -10.39426 -10.04108 -9.35146 -8.97361 -8.61259 -7.70258 -6.84533 -5.49765 1.45832 1.53682 2.02367 2.36067 3.01728 3.07012 3.11751 3.86440 3.94230 4.42257 4.50610 4.93889 5.04789 5.31207 5.47447 5.49715 5.69003 5.70190 5.76062 6.02480 6.15916 6.20983 6.41693 6.44754 6.57292 6.83351 7.04212 7.18571 7.64469 7.76959 8.72249 10.09635 Molecular weight = 275.02amu Principal moments of inertia in cm(-1) A = 0.021077 B = 0.006796 C = 0.005467 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1328.170183 B = 4118.873039 C = 5120.384684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.118 4.118 3 C -0.089 4.089 4 C -0.065 4.065 5 Cl -0.087 7.087 6 C -0.081 4.081 7 C -0.155 4.155 8 C 0.202 3.798 9 N -1.068 6.068 10 S 2.699 3.301 11 O -0.996 6.996 12 O -0.987 6.987 13 C -1.024 5.024 14 H 0.110 0.890 15 C 0.135 3.865 16 N -0.839 5.839 17 Si 0.922 3.078 18 H -0.263 1.263 19 H -0.275 1.275 20 H -0.261 1.261 21 H 0.070 0.930 22 H 0.068 0.932 23 H 0.069 0.931 24 H 0.130 0.870 25 H 0.135 0.865 26 H 0.170 0.830 27 H 0.413 0.587 28 H 0.294 0.706 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.406 11.706 4.810 12.733 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.122 4.122 3 C -0.108 4.108 4 C -0.092 4.092 5 Cl -0.059 7.059 6 C -0.100 4.100 7 C -0.176 4.176 8 C 0.103 3.897 9 N -0.809 5.809 10 S 2.800 3.200 11 O -0.986 6.986 12 O -0.977 6.977 13 C -1.157 5.157 14 H 0.128 0.872 15 C -0.084 4.084 16 N -0.468 5.468 17 Si 0.746 3.254 18 H -0.187 1.187 19 H -0.200 1.200 20 H -0.185 1.185 21 H 0.088 0.912 22 H 0.087 0.913 23 H 0.088 0.912 24 H 0.148 0.852 25 H 0.153 0.847 26 H 0.187 0.813 27 H 0.247 0.753 28 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.610 11.225 3.773 11.951 hybrid contribution 0.901 -0.176 1.099 1.432 sum -0.710 11.049 4.873 12.096 Atomic orbital electron populations 1.20693 0.90675 1.03167 1.02244 1.19617 0.96263 0.91320 1.05008 1.20608 0.91738 0.97719 1.00730 1.20734 0.92238 0.86483 1.09780 1.98327 1.77199 1.33032 1.97332 1.20822 1.00331 0.89888 0.98975 1.21935 0.92845 1.00946 1.01863 1.17348 0.90934 0.85508 0.95936 1.54341 1.33131 1.24305 1.69090 1.01138 0.75212 0.70074 0.73579 1.93400 1.65332 1.52890 1.86988 1.93418 1.82971 1.80551 1.40794 1.30509 1.31608 1.25736 1.27863 0.87172 1.24749 0.97995 0.92667 0.93034 1.69874 1.38799 1.17937 1.20206 0.86158 0.80340 0.78761 0.80173 1.18715 1.20013 1.18547 0.91169 0.91258 0.91221 0.85191 0.84732 0.81287 0.75309 0.89521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.34 9.47 36.00 0.34 -1.00 15 2 C -0.12 -1.80 5.90 -104.43 -0.62 -2.42 15 3 C -0.09 -1.25 9.48 -39.58 -0.38 -1.62 15 4 C -0.06 -0.96 6.32 -39.48 -0.25 -1.21 15 5 Cl -0.09 -1.13 28.95 -51.86 -1.50 -2.63 15 6 C -0.08 -1.31 9.82 -39.58 -0.39 -1.69 15 7 C -0.15 -2.92 8.96 -39.38 -0.35 -3.27 15 8 C 0.20 3.72 6.16 -83.76 -0.52 3.20 15 9 N -1.07 -20.72 5.24 32.42 0.17 -20.55 15 10 S 2.70 68.58 4.64 -107.50 -0.50 68.09 15 11 O -1.00 -27.93 18.02 -57.17 -1.03 -28.96 15 12 O -0.99 -27.90 17.46 -57.17 -1.00 -28.90 15 13 C -1.02 -26.29 7.59 30.60 0.23 -26.06 15 14 H 0.11 2.54 6.86 -52.48 -0.36 2.18 15 15 C 0.13 3.55 5.46 -17.82 -0.10 3.45 15 16 N -0.84 -23.56 13.19 55.43 0.73 -22.82 15 17 Si 0.92 19.46 29.54 -169.99 -5.02 14.44 15 18 H -0.26 -5.39 7.11 56.52 0.40 -4.99 15 19 H -0.28 -5.61 7.11 56.52 0.40 -5.21 15 20 H -0.26 -5.27 7.11 56.52 0.40 -4.87 15 21 H 0.07 0.71 8.14 -51.93 -0.42 0.29 15 22 H 0.07 0.70 8.09 -51.93 -0.42 0.28 15 23 H 0.07 0.88 7.15 -51.93 -0.37 0.51 15 24 H 0.13 1.48 8.06 -52.49 -0.42 1.05 15 25 H 0.13 1.90 8.06 -52.48 -0.42 1.47 15 26 H 0.17 3.46 4.46 -52.49 -0.23 3.23 15 27 H 0.41 6.66 7.92 -34.47 -0.27 6.39 15 28 H 0.29 7.43 8.31 -40.82 -0.34 7.09 15 LS Contribution 274.55 15.07 4.14 4.14 Total: -1.00 -32.30 274.55 -8.09 -40.40 By element: Atomic # 1 Polarization: 9.48 SS G_CDS: -2.06 Total: 7.42 kcal Atomic # 6 Polarization: -28.59 SS G_CDS: -2.02 Total: -30.61 kcal Atomic # 7 Polarization: -44.28 SS G_CDS: 0.90 Total: -43.38 kcal Atomic # 8 Polarization: -55.83 SS G_CDS: -2.03 Total: -57.86 kcal Atomic # 14 Polarization: 19.46 SS G_CDS: -5.02 Total: 14.44 kcal Atomic # 16 Polarization: 68.58 SS G_CDS: -0.50 Total: 68.09 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.50 Total: -2.63 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -32.30 -8.09 -40.40 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044509577.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.756 kcal (2) G-P(sol) polarization free energy of solvation -32.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds