Wall clock time and date at job start Mon Mar 30 2020 01:16:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.36936 * 119.99994 * 2 1 4 4 H 1.08006 * 119.99716 * 154.60423 * 3 2 1 5 5 C 1.38815 * 120.00095 * 334.60346 * 3 2 1 6 6 N 1.31622 * 119.99508 * 3.91403 * 5 3 2 7 7 Si 1.86797 * 120.00036 * 183.91118 * 5 3 2 8 8 H 1.48502 * 109.46887 * 85.00282 * 7 5 3 9 9 H 1.48494 * 109.47106 * 205.00158 * 7 5 3 10 10 H 1.48498 * 109.47139 * 325.00161 * 7 5 3 11 11 C 1.46501 * 120.00115 * 180.02562 * 2 1 3 12 12 C 1.50699 * 109.47517 * 89.99961 * 11 2 1 13 13 C 1.38270 * 119.94426 * 269.73358 * 12 11 2 14 14 C 1.38144 * 120.05326 * 179.72722 * 13 12 11 15 15 C 1.38730 * 119.94744 * 0.55851 * 14 13 12 16 16 O 1.35897 * 120.05813 * 179.68670 * 15 14 13 17 17 C 1.42900 * 117.00179 * 0.02562 * 16 15 14 18 18 F 1.39906 * 109.46959 * 59.99678 * 17 16 15 19 19 F 1.39899 * 109.47190 * 179.97438 * 17 16 15 20 20 F 1.39902 * 109.46750 * 299.99851 * 17 16 15 21 21 C 1.38736 * 119.88516 * 359.71048 * 15 14 13 22 22 C 1.38142 * 119.94703 * 359.97438 * 21 15 14 23 23 H 1.09009 * 109.47449 * 84.46912 * 1 2 3 24 24 H 1.09007 * 109.47424 * 204.45889 * 1 2 3 25 25 H 1.08995 * 109.47685 * 324.46728 * 1 2 3 26 26 H 0.97000 * 119.99193 * 179.97438 * 6 5 3 27 27 H 1.08997 * 109.47352 * 210.00200 * 11 2 1 28 28 H 1.09000 * 109.47139 * 330.00022 * 11 2 1 29 29 H 1.08000 * 119.97227 * 359.96604 * 13 12 11 30 30 H 1.08001 * 120.02469 * 180.25033 * 14 13 12 31 31 H 1.08000 * 120.02685 * 179.97438 * 21 15 14 32 32 H 1.07999 * 119.97506 * 179.97438 * 22 21 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1496 1.1859 0.0000 4 1 3.1514 1.2310 0.4012 5 6 1.5562 2.3300 -0.5156 6 7 0.3086 2.2929 -0.9336 7 14 2.5280 3.9221 -0.6161 8 1 3.3208 3.9396 -1.8716 9 1 1.5921 5.0748 -0.6055 10 1 3.4438 4.0173 0.5490 11 6 2.1975 -1.2687 -0.0006 12 6 2.4487 -1.7032 -1.4215 13 6 1.5288 -2.5058 -2.0707 14 6 1.7541 -2.9008 -3.3752 15 6 2.9099 -2.5011 -4.0300 16 8 3.1369 -2.8936 -5.3111 17 6 2.1423 -3.7171 -5.9232 18 9 0.9223 -3.0329 -5.9501 19 9 2.5325 -4.0256 -7.2308 20 9 1.9983 -4.8987 -5.1879 21 6 3.8341 -1.7003 -3.3745 22 6 3.6011 -1.3027 -2.0723 23 1 -0.3634 0.0991 -1.0229 24 1 -0.3634 -0.9355 0.4255 25 1 -0.3634 0.8362 0.5972 26 1 -0.1061 3.0925 -1.2935 27 1 3.1498 -1.1387 0.5133 28 1 1.6084 -2.0286 0.5129 29 1 0.6315 -2.8210 -1.5588 30 1 1.0333 -3.5244 -3.8832 31 1 4.7349 -1.3882 -3.8819 32 1 4.3203 -0.6797 -1.5614 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044316945.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:16:24 Heat of formation + Delta-G solvation = -143.506500 kcal Electronic energy + Delta-G solvation = -21355.052330 eV Core-core repulsion = 17480.832724 eV Total energy + Delta-G solvation = -3874.219607 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 275.087 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.41358 -48.16131 -47.98772 -39.92491 -37.70116 -35.30039 -31.82049 -30.70944 -29.80397 -26.48346 -25.95651 -24.99255 -22.59129 -22.04566 -20.56985 -19.44035 -19.11244 -18.88958 -16.79487 -16.49770 -15.58888 -15.13640 -14.95318 -14.81960 -14.73029 -14.46750 -14.34266 -14.15080 -14.08520 -13.71895 -13.58670 -13.30003 -12.94215 -12.91762 -12.26505 -11.60301 -11.28700 -10.97225 -10.89749 -10.74219 -10.62047 -10.23422 -10.07143 -9.93397 -8.66078 -8.56086 -7.99476 -6.82179 -5.80638 -3.25531 1.60083 1.64217 1.71809 2.91392 3.34969 3.40800 3.41861 3.83701 3.92039 4.16698 4.46461 4.97325 5.06079 5.35529 5.43010 5.60792 5.69023 5.81468 5.84576 6.10268 6.40311 6.43773 6.55292 6.65301 6.75966 6.82643 7.19688 7.36336 7.43621 7.71129 7.80374 8.34929 9.18139 9.78337 10.28222 11.23526 Molecular weight = 275.09amu Principal moments of inertia in cm(-1) A = 0.025326 B = 0.004807 C = 0.004605 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1105.300767 B = 5823.973380 C = 6078.330585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.165 3.835 2 N -0.593 5.593 3 C -0.256 4.256 4 H 0.071 0.929 5 C 0.008 3.992 6 N -0.903 5.903 7 Si 0.903 3.097 8 H -0.285 1.285 9 H -0.290 1.290 10 H -0.279 1.279 11 C 0.181 3.819 12 C -0.090 4.090 13 C -0.077 4.077 14 C -0.189 4.189 15 C 0.073 3.927 16 O -0.314 6.314 17 C 0.603 3.397 18 F -0.166 7.166 19 F -0.139 7.139 20 F -0.169 7.169 21 C -0.123 4.123 22 C -0.070 4.070 23 H 0.025 0.975 24 H -0.007 1.007 25 H 0.055 0.945 26 H 0.254 0.746 27 H 0.056 0.944 28 H 0.049 0.951 29 H 0.123 0.877 30 H 0.123 0.877 31 H 0.128 0.872 32 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.715 -12.243 -6.504 14.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.314 5.314 3 C -0.385 4.385 4 H 0.088 0.912 5 C -0.191 4.191 6 N -0.547 5.547 7 Si 0.732 3.268 8 H -0.212 1.212 9 H -0.216 1.216 10 H -0.204 1.204 11 C 0.053 3.947 12 C -0.094 4.094 13 C -0.096 4.096 14 C -0.207 4.207 15 C 0.031 3.969 16 O -0.234 6.234 17 C 0.512 3.488 18 F -0.148 7.148 19 F -0.120 7.120 20 F -0.151 7.151 21 C -0.142 4.142 22 C -0.089 4.089 23 H 0.044 0.956 24 H 0.011 0.989 25 H 0.074 0.926 26 H 0.064 0.936 27 H 0.074 0.926 28 H 0.067 0.933 29 H 0.141 0.859 30 H 0.141 0.859 31 H 0.146 0.854 32 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.681 -12.036 -6.636 14.229 hybrid contribution 0.086 0.822 -0.664 1.060 sum 3.767 -11.214 -7.300 13.900 Atomic orbital electron populations 1.20916 0.82004 0.95524 0.99473 1.44089 1.02113 1.00258 1.84950 1.19207 0.99643 0.85955 1.33742 0.91162 1.25210 0.96521 0.98934 0.98386 1.70083 1.11263 1.28173 1.45228 0.86300 0.79342 0.83013 0.78114 1.21203 1.21609 1.20435 1.19992 0.96782 0.88734 0.89160 1.21307 0.92869 0.93749 1.01495 1.20775 0.98850 0.96881 0.93131 1.21332 0.96873 1.05070 0.97466 1.18571 0.97246 1.00598 0.80473 1.86358 1.43457 1.64675 1.28942 1.19368 0.76433 0.76573 0.76451 1.93310 1.45530 1.79756 1.96181 1.93271 1.91324 1.92502 1.34936 1.93280 1.95330 1.49121 1.77349 1.20341 0.99113 0.99601 0.95106 1.20877 0.97616 0.97570 0.92790 0.95632 0.98868 0.92646 0.93552 0.92596 0.93252 0.85860 0.85917 0.85368 0.84939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 22. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.17 4.01 8.99 59.84 0.54 4.54 16 2 N -0.59 -14.41 2.91 -182.50 -0.53 -14.94 16 3 C -0.26 -6.77 9.67 -15.06 -0.15 -6.91 16 4 H 0.07 1.79 7.83 -52.48 -0.41 1.38 16 5 C 0.01 0.23 5.38 -17.43 -0.09 0.13 16 6 N -0.90 -25.90 10.13 55.49 0.56 -25.33 16 7 Si 0.90 21.40 29.56 -169.99 -5.02 16.37 16 8 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 9 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 10 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 11 C 0.18 3.53 5.83 -5.19 -0.03 3.50 16 12 C -0.09 -1.68 5.46 -104.60 -0.57 -2.25 16 13 C -0.08 -1.35 9.69 -39.60 -0.38 -1.74 16 14 C -0.19 -3.13 8.26 -39.43 -0.33 -3.46 16 15 C 0.07 1.22 6.48 -39.22 -0.25 0.96 16 16 O -0.31 -4.81 10.37 -19.42 -0.20 -5.01 16 17 C 0.60 8.07 3.42 101.05 0.35 8.41 16 18 F -0.17 -2.34 15.56 2.25 0.04 -2.30 16 19 F -0.14 -1.69 17.53 2.25 0.04 -1.65 16 20 F -0.17 -2.17 15.56 2.25 0.04 -2.13 16 21 C -0.12 -2.03 9.99 -39.43 -0.39 -2.42 16 22 C -0.07 -1.23 9.69 -39.60 -0.38 -1.61 16 23 H 0.03 0.67 7.43 -51.92 -0.39 0.29 16 24 H -0.01 -0.15 7.83 -51.92 -0.41 -0.56 16 25 H 0.05 1.46 7.04 -51.93 -0.37 1.09 16 26 H 0.25 7.10 8.31 -40.82 -0.34 6.76 16 27 H 0.06 1.03 7.98 -51.93 -0.41 0.62 16 28 H 0.05 0.87 7.80 -51.93 -0.40 0.46 16 29 H 0.12 1.97 8.06 -52.49 -0.42 1.55 16 30 H 0.12 1.84 5.10 -52.49 -0.27 1.57 16 31 H 0.13 1.82 8.06 -52.49 -0.42 1.40 16 32 H 0.13 2.21 8.06 -52.49 -0.42 1.79 16 LS Contribution 289.31 15.07 4.36 4.36 Total: -1.00 -28.60 289.31 -5.48 -34.08 By element: Atomic # 1 Polarization: 0.46 SS G_CDS: -3.06 Total: -2.60 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -1.70 Total: -0.85 kcal Atomic # 7 Polarization: -40.30 SS G_CDS: 0.03 Total: -40.27 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -0.20 Total: -5.01 kcal Atomic # 9 Polarization: -6.20 SS G_CDS: 0.11 Total: -6.09 kcal Atomic # 14 Polarization: 21.40 SS G_CDS: -5.02 Total: 16.37 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -28.60 -5.48 -34.08 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044316945.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.423 kcal (2) G-P(sol) polarization free energy of solvation -28.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.084 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.506 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds