Wall clock time and date at job start Mon Mar 30 2020 01:11:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08996 * 109.47309 * 2 1 4 4 N 1.46499 * 109.47322 * 239.99938 * 2 1 3 5 5 C 1.36936 * 119.99923 * 87.17832 * 4 2 1 6 6 H 1.08005 * 120.00282 * 0.02562 * 5 4 2 7 7 C 1.38816 * 120.00025 * 180.02562 * 5 4 2 8 8 N 1.31617 * 119.99879 * 180.02562 * 7 5 4 9 9 Si 1.86798 * 119.99841 * 359.97438 * 7 5 4 10 10 H 1.48505 * 109.46742 * 90.00417 * 9 7 5 11 11 H 1.48497 * 109.46963 * 210.00266 * 9 7 5 12 12 H 1.48496 * 109.47473 * 330.00581 * 9 7 5 13 13 C 1.50701 * 109.46847 * 120.00104 * 2 1 3 14 14 C 1.36137 * 120.16033 * 92.81247 * 13 2 1 15 15 C 1.39300 * 121.00334 * 180.02562 * 14 13 2 16 16 C 1.36246 * 120.97649 * 359.97438 * 15 14 13 17 17 Cl 1.73601 * 120.18516 * 179.97438 * 16 15 14 18 18 C 1.40609 * 119.62766 * 0.02562 * 16 15 14 19 19 C 1.40518 * 121.28409 * 180.02562 * 18 16 15 20 20 C 1.36096 * 119.65257 * 179.97438 * 19 18 16 21 21 C 1.39378 * 120.98891 * 359.97438 * 20 19 18 22 22 C 1.36096 * 120.99322 * 0.02562 * 21 20 19 23 23 C 1.40508 * 120.15615 * 272.83445 * 13 2 1 24 24 H 1.09003 * 109.47363 * 59.99950 * 1 2 3 25 25 H 1.09000 * 109.47282 * 179.97438 * 1 2 3 26 26 H 1.08996 * 109.47505 * 299.99932 * 1 2 3 27 27 H 0.97001 * 119.99708 * 267.18474 * 4 2 1 28 28 H 0.97000 * 119.99717 * 179.97438 * 8 7 5 29 29 H 1.07998 * 119.49299 * 359.97438 * 14 13 2 30 30 H 1.08010 * 119.50925 * 180.02562 * 15 14 13 31 31 H 1.07994 * 120.17336 * 359.97438 * 19 18 16 32 32 H 1.07999 * 119.50660 * 180.02562 * 20 19 18 33 33 H 1.08005 * 119.50578 * 180.27639 * 21 20 19 34 34 H 1.08006 * 120.17541 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0184 -0.6906 -1.1961 5 6 2.1916 0.0027 -2.3643 6 1 1.9686 1.0587 -2.4037 7 6 2.6539 -0.6518 -3.4978 8 7 2.8208 0.0147 -4.6204 9 14 3.0403 -2.4781 -3.4295 10 1 1.8241 -3.2548 -3.7802 11 1 4.1234 -2.7913 -4.3959 12 1 3.4804 -2.8400 -2.0582 13 6 2.0323 -0.7104 1.2305 14 6 2.3147 -2.0414 1.1844 15 6 2.7794 -2.7157 2.3113 16 6 2.9652 -2.0624 3.4924 17 17 3.5446 -2.9232 4.8842 18 6 2.6841 -0.6874 3.5780 19 6 2.8637 0.0208 4.7783 20 6 2.5817 1.3514 4.8236 21 6 2.1168 2.0253 3.6956 22 6 1.9308 1.3722 2.5162 23 6 2.2109 -0.0024 2.4309 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 2.2190 -1.6390 -1.1607 28 1 3.1442 -0.4426 -5.4124 29 1 2.1756 -2.5828 0.2604 30 1 2.9963 -3.7719 2.2475 31 1 3.2236 -0.4882 5.6602 32 1 2.7209 1.8935 5.7473 33 1 1.9047 3.0826 3.7574 34 1 1.5704 1.9076 1.6501 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000185390619.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:06 Heat of formation + Delta-G solvation = 49.663019 kcal Electronic energy + Delta-G solvation = -18430.884627 eV Core-core repulsion = 15547.607384 eV Total energy + Delta-G solvation = -2883.277243 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 275.077 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.54439 -37.05680 -36.82886 -35.18083 -32.80877 -31.30544 -30.42306 -29.21212 -28.36810 -24.16256 -23.43940 -23.07372 -22.03709 -19.83051 -18.12721 -17.42099 -16.87966 -16.39605 -14.92659 -14.66170 -14.35078 -14.11773 -13.82078 -13.71531 -13.44133 -12.89981 -12.77730 -12.32794 -12.24176 -12.19278 -11.83437 -11.44895 -11.30938 -10.99497 -10.94696 -10.79207 -10.67367 -10.36796 -10.07676 -9.64118 -9.58997 -9.03285 -8.63114 -7.71274 -7.37524 -5.83035 -3.19564 0.50136 1.00861 2.00734 2.09521 3.00287 3.32469 3.34265 3.41298 4.09120 4.53179 4.65058 4.77531 4.81212 5.00909 5.10274 5.20306 5.32552 5.41961 5.46728 5.53237 5.60701 5.81205 5.98285 6.04726 6.10908 6.14677 6.22534 6.32321 6.36359 6.48397 6.56219 6.72229 6.80013 6.93706 6.97543 7.91170 8.35130 9.11853 9.84329 10.02777 11.34939 Molecular weight = 275.08amu Principal moments of inertia in cm(-1) A = 0.020554 B = 0.005718 C = 0.004752 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1361.963233 B = 4895.556573 C = 5890.515118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.210 3.790 3 H 0.072 0.928 4 N -0.745 5.745 5 C -0.246 4.246 6 H 0.093 0.907 7 C 0.008 3.992 8 N -0.931 5.931 9 Si 0.879 3.121 10 H -0.282 1.282 11 H -0.289 1.289 12 H -0.277 1.277 13 C -0.043 4.043 14 C -0.114 4.114 15 C -0.089 4.089 16 C -0.043 4.043 17 Cl -0.076 7.076 18 C -0.041 4.041 19 C -0.112 4.112 20 C -0.112 4.112 21 C -0.122 4.122 22 C -0.093 4.093 23 C -0.038 4.038 24 H 0.065 0.935 25 H 0.048 0.952 26 H 0.043 0.957 27 H 0.362 0.638 28 H 0.260 0.740 29 H 0.132 0.868 30 H 0.131 0.869 31 H 0.128 0.872 32 H 0.122 0.878 33 H 0.124 0.876 34 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.602 -1.346 19.821 19.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.101 3.899 3 H 0.090 0.910 4 N -0.390 5.390 5 C -0.375 4.375 6 H 0.110 0.890 7 C -0.188 4.188 8 N -0.578 5.578 9 Si 0.709 3.291 10 H -0.209 1.209 11 H -0.215 1.215 12 H -0.203 1.203 13 C -0.044 4.044 14 C -0.133 4.133 15 C -0.108 4.108 16 C -0.070 4.070 17 Cl -0.047 7.047 18 C -0.042 4.042 19 C -0.130 4.130 20 C -0.130 4.130 21 C -0.140 4.140 22 C -0.111 4.111 23 C -0.039 4.039 24 H 0.084 0.916 25 H 0.068 0.932 26 H 0.062 0.938 27 H 0.197 0.803 28 H 0.071 0.929 29 H 0.150 0.850 30 H 0.149 0.851 31 H 0.146 0.854 32 H 0.140 0.860 33 H 0.142 0.858 34 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -1.521 -1.242 19.734 19.831 hybrid contribution 0.453 -1.521 -0.003 1.587 sum -1.067 -2.763 19.731 19.952 Atomic orbital electron populations 1.22400 0.97223 1.01507 1.00964 1.19195 0.92472 0.95477 0.82801 0.91010 1.42909 1.80185 1.08266 1.07635 1.19053 1.37562 0.94951 0.85985 0.88966 1.24643 1.01141 0.97380 0.95616 1.69689 1.52014 1.35211 1.00870 0.86641 0.78177 0.87069 0.77210 1.20892 1.21534 1.20281 1.20467 0.95110 0.94054 0.94804 1.20621 1.00081 0.94648 0.97931 1.20769 0.98406 1.00473 0.91135 1.20536 1.05478 0.91885 0.89082 1.98331 1.87460 1.76424 1.42471 1.17744 1.00513 0.91546 0.94371 1.21003 1.00500 0.94727 0.96722 1.20834 0.99140 0.94459 0.98562 1.20876 1.00040 1.00148 0.92950 1.21197 0.98423 0.92955 0.98496 1.17845 0.99826 0.93977 0.92228 0.91577 0.93238 0.93752 0.80327 0.92948 0.85008 0.85111 0.85432 0.86027 0.85826 0.84576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.70 9.49 37.16 0.35 -2.35 16 2 C 0.21 3.92 2.57 -69.08 -0.18 3.74 16 3 H 0.07 1.36 6.50 -51.93 -0.34 1.02 16 4 N -0.75 -17.06 4.82 -54.55 -0.26 -17.32 16 5 C -0.25 -6.71 10.42 -15.06 -0.16 -6.87 16 6 H 0.09 2.67 8.06 -52.48 -0.42 2.25 16 7 C 0.01 0.24 5.50 -17.43 -0.10 0.14 16 8 N -0.93 -28.67 13.97 55.49 0.78 -27.90 16 9 Si 0.88 21.61 27.74 -169.99 -4.71 16.90 16 10 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 11 H -0.29 -7.24 7.11 56.52 0.40 -6.84 16 12 H -0.28 -6.36 6.52 56.52 0.37 -5.99 16 13 C -0.04 -0.73 5.05 -104.52 -0.53 -1.26 16 14 C -0.11 -1.87 9.16 -39.94 -0.37 -2.24 16 15 C -0.09 -1.28 9.72 -39.90 -0.39 -1.67 16 16 C -0.04 -0.61 6.32 -39.40 -0.25 -0.86 16 17 Cl -0.08 -0.91 27.51 -51.86 -1.43 -2.34 16 18 C -0.04 -0.60 5.74 -106.81 -0.61 -1.21 16 19 C -0.11 -1.38 9.44 -39.49 -0.37 -1.75 16 20 C -0.11 -1.22 9.95 -39.93 -0.40 -1.62 16 21 C -0.12 -1.39 9.95 -39.93 -0.40 -1.78 16 22 C -0.09 -1.25 9.28 -39.48 -0.37 -1.62 16 23 C -0.04 -0.59 5.74 -106.84 -0.61 -1.20 16 24 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 25 H 0.05 0.82 8.14 -51.93 -0.42 0.40 16 26 H 0.04 0.63 8.14 -51.93 -0.42 0.21 16 27 H 0.36 8.10 3.36 -40.82 -0.14 7.96 16 28 H 0.26 7.66 8.31 -40.82 -0.34 7.32 16 29 H 0.13 2.21 6.10 -52.49 -0.32 1.89 16 30 H 0.13 1.60 8.06 -52.48 -0.42 1.17 16 31 H 0.13 1.38 6.99 -52.49 -0.37 1.01 16 32 H 0.12 0.99 8.06 -52.49 -0.42 0.56 16 33 H 0.12 1.08 8.06 -52.48 -0.42 0.66 16 34 H 0.14 1.73 6.43 -52.48 -0.34 1.39 16 LS Contribution 297.45 15.07 4.48 4.48 Total: -1.00 -30.25 297.45 -9.14 -39.39 By element: Atomic # 1 Polarization: 10.95 SS G_CDS: -3.63 Total: 7.32 kcal Atomic # 6 Polarization: -16.16 SS G_CDS: -4.37 Total: -20.53 kcal Atomic # 7 Polarization: -45.73 SS G_CDS: 0.51 Total: -45.22 kcal Atomic # 14 Polarization: 21.61 SS G_CDS: -4.71 Total: 16.90 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.43 Total: -2.34 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -30.25 -9.14 -39.39 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000185390619.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.056 kcal (2) G-P(sol) polarization free energy of solvation -30.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.393 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds