Wall clock time and date at job start Mon Mar 30 2020 01:52:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08993 * 109.47097 * 2 1 4 4 C 1.50707 * 109.46692 * 240.00368 * 2 1 3 5 5 H 1.07997 * 120.00412 * 275.00321 * 4 2 1 6 6 C 1.37878 * 119.99902 * 95.00630 * 4 2 1 7 7 N 1.31508 * 120.00170 * 184.90962 * 6 4 2 8 8 Si 1.86807 * 119.99876 * 4.91088 * 6 4 2 9 9 H 1.48503 * 109.47044 * 84.83582 * 8 6 4 10 10 H 1.48503 * 109.47110 * 204.83208 * 8 6 4 11 11 H 1.48499 * 109.47347 * 324.83521 * 8 6 4 12 12 N 1.46495 * 109.46950 * 120.00931 * 2 1 3 13 13 C 1.34780 * 119.99388 * 274.99377 * 12 2 1 14 14 O 1.21711 * 120.00355 * 0.02562 * 13 12 2 15 15 C 1.46546 * 119.99772 * 180.02562 * 13 12 2 16 16 C 1.37960 * 126.22549 * 179.69150 * 15 13 12 17 17 C 1.39786 * 107.13008 * 179.84639 * 16 15 13 18 18 Cl 1.73595 * 126.06311 * 180.15511 * 17 16 15 19 19 C 1.35725 * 107.87606 * 0.42325 * 17 16 15 20 20 Cl 1.73605 * 125.58505 * 179.72120 * 19 17 16 21 21 N 1.35666 * 108.82836 * 359.73339 * 19 17 16 22 22 H 0.97008 * 125.69092 * 179.97438 * 21 19 17 23 23 H 1.09006 * 109.47034 * 55.03017 * 1 2 3 24 24 H 1.08993 * 109.47019 * 295.03459 * 1 2 3 25 25 H 1.09001 * 109.47478 * 175.02850 * 1 2 3 26 26 H 0.96999 * 120.00090 * 179.97438 * 7 6 4 27 27 H 0.97000 * 120.00171 * 94.99890 * 12 2 1 28 28 H 1.07996 * 126.43373 * 359.96352 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0323 -0.7104 -1.2306 5 1 2.1354 -1.7854 -1.2293 6 6 2.3603 0.0122 -2.3581 7 7 2.7059 -0.6129 -3.4623 8 14 2.3136 1.8793 -2.3173 9 1 3.5992 2.3949 -1.7820 10 1 2.1059 2.3994 -3.6926 11 1 1.1987 2.3276 -1.4448 12 7 2.0183 -0.6908 1.1960 13 6 2.1471 -0.0185 2.3570 14 8 1.8573 1.1624 2.4119 15 6 2.6360 -0.7093 3.5534 16 6 2.8221 -0.1483 4.8000 17 6 3.2948 -1.1602 5.6405 18 17 3.6886 -0.9907 7.3227 19 6 3.3970 -2.2974 4.9067 20 17 3.9469 -3.8346 5.4971 21 7 2.9993 -2.0360 3.6363 22 1 2.9751 -2.6761 2.9078 23 1 -0.3633 0.5890 -0.8422 24 1 -0.3633 0.4348 0.9311 25 1 -0.3634 -1.0238 -0.0891 26 1 2.9363 -0.1045 -4.2556 27 1 2.2490 -1.6319 1.1524 28 1 2.6356 0.8793 5.0752 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194651609.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:52:30 Heat of formation + Delta-G solvation = -13.143175 kcal Electronic energy + Delta-G solvation = -16507.963793 eV Core-core repulsion = 13418.271214 eV Total energy + Delta-G solvation = -3089.692579 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 276.017 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.53294 -38.77746 -37.00069 -36.58323 -35.10946 -32.57873 -31.32263 -30.37429 -28.61960 -25.43571 -23.29100 -21.24963 -20.57091 -19.92845 -19.22624 -17.07079 -15.95197 -15.64824 -15.41058 -14.87935 -14.24345 -14.07832 -13.80556 -13.40297 -13.28052 -12.62532 -12.49936 -12.09614 -11.98934 -11.62083 -11.58283 -11.21409 -11.03143 -10.93208 -10.70654 -9.98909 -9.63745 -9.34030 -9.14902 -8.82085 -8.50443 -8.21059 -6.34116 -4.39559 1.20275 1.28748 1.97137 2.13960 3.08521 3.19617 3.28191 3.34435 3.58331 3.71840 4.23468 4.73090 4.93308 5.09192 5.39926 5.54371 6.08093 6.20543 6.32944 6.39582 6.54963 6.77419 6.81571 7.03857 7.20796 7.36117 7.93987 8.34413 8.59907 8.67778 9.26616 10.77185 Molecular weight = 276.02amu Principal moments of inertia in cm(-1) A = 0.030197 B = 0.004326 C = 0.004010 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 927.034080 B = 6471.240091 C = 6981.548050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.231 3.769 3 H 0.054 0.946 4 C -0.535 4.535 5 H 0.078 0.922 6 C 0.083 3.917 7 N -0.885 5.885 8 Si 0.874 3.126 9 H -0.272 1.272 10 H -0.284 1.284 11 H -0.259 1.259 12 N -0.698 5.698 13 C 0.573 3.427 14 O -0.535 6.535 15 C 0.001 3.999 16 C -0.100 4.100 17 C -0.097 4.097 18 Cl -0.035 7.035 19 C 0.090 3.910 20 Cl -0.002 7.002 21 N -0.520 5.520 22 H 0.429 0.571 23 H 0.055 0.945 24 H 0.031 0.969 25 H 0.047 0.953 26 H 0.269 0.731 27 H 0.388 0.612 28 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.417 -4.698 16.929 17.626 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.130 3.870 3 H 0.072 0.928 4 C -0.573 4.573 5 H 0.096 0.904 6 C -0.122 4.122 7 N -0.521 5.521 8 Si 0.700 3.300 9 H -0.197 1.197 10 H -0.210 1.210 11 H -0.183 1.183 12 N -0.346 5.346 13 C 0.358 3.642 14 O -0.412 6.412 15 C -0.114 4.114 16 C -0.126 4.126 17 C -0.132 4.132 18 Cl -0.006 7.006 19 C -0.054 4.054 20 Cl 0.026 6.974 21 N -0.121 5.121 22 H 0.270 0.730 23 H 0.074 0.926 24 H 0.050 0.950 25 H 0.067 0.933 26 H 0.079 0.921 27 H 0.221 0.779 28 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 1.316 -4.030 16.741 17.270 hybrid contribution 0.304 -0.168 -0.303 0.461 sum 1.619 -4.198 16.439 17.043 Atomic orbital electron populations 1.22229 0.98198 1.00754 0.99566 1.19221 0.91156 0.94437 0.82204 0.92798 1.20959 1.45852 0.95566 0.94927 0.90351 1.24943 0.93379 0.98819 0.95097 1.69868 1.44135 1.36383 1.01708 0.86891 0.79939 0.85549 0.77576 1.19696 1.21038 1.18340 1.46669 1.64516 1.13497 1.09886 1.16992 0.78915 0.86578 0.81757 1.90834 1.51549 1.14559 1.84279 1.20951 1.10437 0.82497 0.97480 1.21113 1.02307 0.99671 0.89519 1.19572 1.12801 0.93207 0.87644 1.98334 1.92903 1.97703 1.11669 1.20508 1.09570 0.89314 0.86051 1.98414 1.87660 1.25440 1.85876 1.41973 1.50265 1.10757 1.09116 0.73049 0.92596 0.95004 0.93347 0.92065 0.77949 0.81626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.09 9.47 37.16 0.35 -2.74 15 2 C 0.23 5.21 2.22 -69.08 -0.15 5.06 15 3 H 0.05 1.33 4.73 -51.93 -0.25 1.08 15 4 C -0.54 -13.69 9.05 -34.44 -0.31 -14.00 15 5 H 0.08 2.10 8.06 -52.49 -0.42 1.68 15 6 C 0.08 2.23 5.47 -17.82 -0.10 2.13 15 7 N -0.89 -25.21 13.96 55.43 0.77 -24.44 15 8 Si 0.87 20.80 26.99 -169.99 -4.59 16.21 15 9 H -0.27 -6.49 7.11 56.52 0.40 -6.09 15 10 H -0.28 -6.66 7.11 56.52 0.40 -6.26 15 11 H -0.26 -6.04 6.82 56.52 0.39 -5.66 15 12 N -0.70 -13.04 5.06 -56.28 -0.29 -13.32 15 13 C 0.57 10.53 7.75 -12.91 -0.10 10.43 15 14 O -0.53 -11.64 16.54 5.18 0.09 -11.55 15 15 C 0.00 0.02 7.06 -81.93 -0.58 -0.56 15 16 C -0.10 -1.38 10.64 -39.10 -0.42 -1.80 15 17 C -0.10 -1.22 6.66 -39.90 -0.27 -1.49 15 18 Cl -0.03 -0.39 29.12 -51.86 -1.51 -1.90 15 19 C 0.09 1.05 7.75 -16.76 -0.13 0.93 15 20 Cl 0.00 -0.02 29.13 -51.86 -1.51 -1.53 15 21 N -0.52 -6.13 6.01 -6.51 -0.04 -6.17 15 22 H 0.43 4.06 8.19 -40.82 -0.33 3.72 15 23 H 0.06 1.17 8.14 -51.93 -0.42 0.75 15 24 H 0.03 0.63 8.14 -51.93 -0.42 0.20 15 25 H 0.05 0.94 8.14 -51.93 -0.42 0.52 15 26 H 0.27 7.22 8.31 -40.82 -0.34 6.88 15 27 H 0.39 6.13 7.72 -40.82 -0.32 5.82 15 28 H 0.17 2.18 8.06 -52.49 -0.42 1.75 15 LS Contribution 283.38 15.07 4.27 4.27 Total: -1.00 -29.42 283.38 -6.66 -36.08 By element: Atomic # 1 Polarization: 6.57 SS G_CDS: -2.16 Total: 4.41 kcal Atomic # 6 Polarization: -0.34 SS G_CDS: -1.70 Total: -2.04 kcal Atomic # 7 Polarization: -44.38 SS G_CDS: 0.45 Total: -43.93 kcal Atomic # 8 Polarization: -11.64 SS G_CDS: 0.09 Total: -11.55 kcal Atomic # 14 Polarization: 20.80 SS G_CDS: -4.59 Total: 16.21 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -3.02 Total: -3.43 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.42 -6.66 -36.08 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194651609.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.936 kcal (2) G-P(sol) polarization free energy of solvation -29.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.480 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.079 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds