Wall clock time and date at job start Mon Mar 30 2020 01:33:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34585 * 125.74911 * 2 1 4 4 N 1.30873 * 107.63344 * 180.02562 * 3 2 1 5 5 C 1.34557 * 107.26312 * 359.97438 * 4 3 2 6 6 C 1.47837 * 126.05037 * 179.97438 * 5 4 3 7 7 O 1.21565 * 120.00196 * 180.02562 * 6 5 4 8 8 N 1.34786 * 119.99635 * 0.03095 * 6 5 4 9 9 C 1.40076 * 119.99630 * 179.97438 * 8 6 5 10 10 C 1.40425 * 125.98106 * 0.02562 * 9 8 6 11 11 C 1.35229 * 107.86821 * 179.75726 * 10 9 8 12 12 N 1.34966 * 107.86733 * 0.42341 * 11 10 9 13 13 C 1.46500 * 125.97782 * 179.83656 * 12 11 10 14 14 C 1.50706 * 109.47299 * 124.71059 * 13 12 11 15 15 H 1.07998 * 119.99503 * 0.02562 * 14 13 12 16 16 C 1.37871 * 120.00434 * 180.02562 * 14 13 12 17 17 N 1.31516 * 119.99826 * 359.72891 * 16 14 13 18 18 Si 1.86800 * 120.00406 * 180.02562 * 16 14 13 19 19 H 1.48501 * 109.46758 * 269.72576 * 18 16 14 20 20 H 1.48499 * 109.47026 * 29.72423 * 18 16 14 21 21 H 1.48496 * 109.47474 * 149.72459 * 18 16 14 22 22 N 1.31239 * 125.97479 * 180.02562 * 9 8 6 23 23 N 1.28847 * 125.74867 * 180.34522 * 2 1 3 24 24 H 1.09008 * 109.46854 * 90.00142 * 1 2 3 25 25 H 1.09000 * 109.47368 * 210.00418 * 1 2 3 26 26 H 1.09004 * 109.47039 * 330.00836 * 1 2 3 27 27 H 1.08007 * 126.18357 * 0.02773 * 3 2 1 28 28 H 0.96991 * 119.99664 * 359.97438 * 8 6 5 29 29 H 1.07998 * 126.06464 * 0.02562 * 10 9 8 30 30 H 1.08000 * 126.06946 * 180.25936 * 11 10 9 31 31 H 1.09004 * 109.47078 * 4.71821 * 13 12 11 32 32 H 1.08993 * 109.47364 * 244.71592 * 13 12 11 33 33 H 0.97000 * 120.00236 * 0.27947 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2512 1.0923 0.0000 4 7 3.4951 0.6853 -0.0006 5 6 3.4751 -0.6601 -0.0003 6 6 4.6573 -1.5478 -0.0013 7 8 4.5112 -2.7546 -0.0015 8 7 5.8971 -1.0190 -0.0019 9 6 7.0172 -1.8601 -0.0023 10 6 6.9946 -3.2641 -0.0026 11 6 8.2748 -3.6997 -0.0084 12 7 9.0806 -2.6170 -0.0022 13 6 10.5455 -2.6344 -0.0019 14 6 11.0578 -1.8249 -1.1653 15 1 10.3617 -1.3451 -1.8373 16 6 12.4149 -1.6968 -1.3717 17 7 13.2626 -2.2767 -0.5502 18 14 13.0499 -0.6927 -2.8132 19 1 13.2102 -1.5740 -3.9977 20 1 12.0818 0.3884 -3.1280 21 1 14.3623 -0.0945 -2.4600 22 7 8.2714 -1.4737 -0.0025 23 7 2.2177 -1.0457 -0.0063 24 1 -0.3633 0.0000 -1.0278 25 1 -0.3634 -0.8899 0.5139 26 1 -0.3633 0.8901 0.5137 27 1 1.9163 2.1191 0.0004 28 1 6.0135 -0.0561 -0.0021 29 1 6.1115 -3.8858 -0.0030 30 1 8.5956 -4.7310 -0.0141 31 1 10.8967 -3.6624 -0.0921 32 1 10.9138 -2.2051 0.9298 33 1 12.9329 -2.7979 0.1986 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000290470304.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:33:44 Heat of formation + Delta-G solvation = 147.827776 kcal Electronic energy + Delta-G solvation = -19883.255106 eV Core-core repulsion = 16562.685033 eV Total energy + Delta-G solvation = -3320.570073 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 276.108 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -43.73958 -40.69634 -39.10413 -35.03316 -34.77529 -33.61390 -32.06641 -30.92803 -29.37462 -28.36629 -26.32414 -24.55914 -23.06378 -22.56073 -21.37871 -20.41777 -19.65692 -18.15547 -17.15987 -17.10837 -16.82858 -16.34034 -15.66223 -15.17357 -14.86297 -14.26074 -14.04189 -13.76628 -13.70404 -13.54594 -13.14774 -12.42333 -12.25730 -12.22333 -11.81998 -11.13256 -10.79261 -10.77655 -10.74543 -10.46935 -10.19570 -10.14436 -9.87321 -9.77265 -8.97206 -8.54824 -8.18585 -7.51196 -6.55209 -4.28973 1.10512 1.77215 1.80839 2.64627 2.70431 3.12594 3.39618 3.44040 3.57227 3.62386 3.75848 3.89317 4.07126 4.42454 4.45066 4.49900 4.71133 4.80947 5.18669 5.44170 5.63638 5.75073 5.97277 6.10804 6.17755 6.42106 6.52611 6.60637 6.77997 7.31306 7.43439 7.66964 7.78615 7.85643 8.16012 8.38215 8.55922 8.65042 9.39182 10.82557 Molecular weight = 276.11amu Principal moments of inertia in cm(-1) A = 0.033767 B = 0.003279 C = 0.003062 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 829.012503 B = 8536.941681 C = 9142.784501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.086 3.914 2 N -0.306 5.306 3 C 0.193 3.807 4 N -0.483 5.483 5 C 0.150 3.850 6 C 0.623 3.377 7 O -0.495 6.495 8 N -0.609 5.609 9 C 0.260 3.740 10 C -0.284 4.284 11 C 0.052 3.948 12 N -0.316 5.316 13 C 0.249 3.751 14 C -0.607 4.607 15 H 0.064 0.936 16 C 0.023 3.977 17 N -0.906 5.906 18 Si 1.079 2.921 19 H -0.286 1.286 20 H -0.286 1.286 21 H -0.282 1.282 22 N -0.295 5.295 23 N -0.248 5.248 24 H 0.091 0.909 25 H 0.100 0.900 26 H 0.103 0.897 27 H 0.228 0.772 28 H 0.421 0.579 29 H 0.162 0.838 30 H 0.169 0.831 31 H 0.047 0.953 32 H 0.036 0.964 33 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.472 5.907 1.827 26.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.102 5.102 3 C -0.103 4.103 4 N -0.208 5.208 5 C -0.130 4.130 6 C 0.404 3.596 7 O -0.365 6.365 8 N -0.257 5.257 9 C 0.007 3.993 10 C -0.316 4.316 11 C -0.097 4.097 12 N -0.098 5.098 13 C 0.131 3.869 14 C -0.646 4.646 15 H 0.083 0.917 16 C -0.182 4.182 17 N -0.542 5.542 18 Si 0.906 3.094 19 H -0.212 1.212 20 H -0.212 1.212 21 H -0.207 1.207 22 N -0.126 5.126 23 N -0.088 5.088 24 H 0.110 0.890 25 H 0.119 0.881 26 H 0.121 0.879 27 H 0.245 0.755 28 H 0.258 0.742 29 H 0.180 0.820 30 H 0.187 0.813 31 H 0.065 0.935 32 H 0.053 0.947 33 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -23.174 6.054 1.086 23.977 hybrid contribution -2.220 -0.376 0.755 2.375 sum -25.394 5.677 1.842 26.086 Atomic orbital electron populations 1.22269 0.72076 1.06058 1.05103 1.47416 1.09400 1.03845 1.49506 1.26527 0.85723 0.96036 1.01995 1.71313 1.20552 1.09282 1.19654 1.23443 0.91877 0.89315 1.08348 1.16021 0.80284 0.85840 0.77466 1.90773 1.84956 1.13212 1.47546 1.41939 1.02085 1.10389 1.71289 1.18980 0.86602 0.89976 1.03749 1.21545 0.97640 0.92642 1.19738 1.22556 0.90536 0.94210 1.02445 1.48824 1.07634 1.01418 1.51915 1.19782 0.68997 0.98844 0.99325 1.22144 0.94833 1.35181 1.12401 0.91728 1.25923 0.92708 0.97444 1.02120 1.70821 1.37328 1.30955 1.15062 0.83385 0.75785 0.75860 0.74331 1.21235 1.21184 1.20735 1.77396 0.98472 1.09208 1.27536 1.74349 1.02632 1.13194 1.18594 0.89032 0.88089 0.87877 0.75533 0.74175 0.82048 0.81336 0.93546 0.94673 0.92248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.20 11.38 59.84 0.68 0.88 16 2 N -0.31 -2.48 3.72 -69.39 -0.26 -2.74 16 3 C 0.19 1.47 12.62 -90.48 -1.14 0.33 16 4 N -0.48 -5.92 11.09 -12.37 -0.14 -6.06 16 5 C 0.15 2.20 7.96 -156.35 -1.24 0.96 16 6 C 0.62 10.83 7.80 -12.33 -0.10 10.74 16 7 O -0.50 -9.72 14.21 5.31 0.08 -9.64 16 8 N -0.61 -10.88 5.44 -11.99 -0.07 -10.95 16 9 C 0.26 5.55 8.11 -154.45 -1.25 4.30 16 10 C -0.28 -5.86 9.60 -39.83 -0.38 -6.24 16 11 C 0.05 1.07 11.43 -17.24 -0.20 0.87 16 12 N -0.32 -7.57 3.67 -62.56 -0.23 -7.80 16 13 C 0.25 6.39 5.57 -5.19 -0.03 6.36 16 14 C -0.61 -17.33 9.24 -34.44 -0.32 -17.65 16 15 H 0.06 1.93 7.81 -52.49 -0.41 1.52 16 16 C 0.02 0.64 5.46 -17.82 -0.10 0.54 16 17 N -0.91 -26.64 13.65 55.43 0.76 -25.89 16 18 Si 1.08 25.32 29.90 -169.99 -5.08 20.23 16 19 H -0.29 -6.43 7.11 56.52 0.40 -6.03 16 20 H -0.29 -6.54 7.11 56.52 0.40 -6.14 16 21 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 22 N -0.30 -7.11 12.42 31.43 0.39 -6.71 16 23 N -0.25 -3.26 12.08 32.07 0.39 -2.87 16 24 H 0.09 0.09 8.14 -51.92 -0.42 -0.33 16 25 H 0.10 0.24 8.14 -51.93 -0.42 -0.18 16 26 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.23 0.47 8.06 -52.48 -0.42 0.04 16 28 H 0.42 6.75 8.53 -40.82 -0.35 6.40 16 29 H 0.16 3.21 5.91 -52.49 -0.31 2.90 16 30 H 0.17 2.79 8.06 -52.49 -0.42 2.37 16 31 H 0.05 1.15 7.94 -51.93 -0.41 0.73 16 32 H 0.04 0.94 8.00 -51.93 -0.42 0.52 16 33 H 0.27 7.68 7.22 -40.82 -0.29 7.38 16 LS Contribution 302.63 15.07 4.56 4.56 Total: -1.00 -37.46 302.63 -6.78 -44.24 By element: Atomic # 1 Polarization: 5.65 SS G_CDS: -3.10 Total: 2.55 kcal Atomic # 6 Polarization: 5.16 SS G_CDS: -4.08 Total: 1.08 kcal Atomic # 7 Polarization: -63.86 SS G_CDS: 0.84 Total: -63.02 kcal Atomic # 8 Polarization: -9.72 SS G_CDS: 0.08 Total: -9.64 kcal Atomic # 14 Polarization: 25.32 SS G_CDS: -5.08 Total: 20.23 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -37.46 -6.78 -44.24 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000290470304.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 192.064 kcal (2) G-P(sol) polarization free energy of solvation -37.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 154.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.236 kcal (6) G-S(sol) free energy of system = (1) + (5) 147.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds