Wall clock time and date at job start Mon Mar 30 2020 01:26:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30994 * 1 3 3 C 1.50697 * 120.00443 * 2 1 4 4 N 1.46499 * 109.47293 * 124.99921 * 3 2 1 5 5 C 1.46499 * 120.00136 * 270.00491 * 4 3 2 6 6 C 1.50703 * 109.47219 * 269.99493 * 5 4 3 7 7 H 1.07996 * 119.99587 * 359.97438 * 6 5 4 8 8 C 1.37875 * 120.00012 * 180.02562 * 6 5 4 9 9 N 1.31516 * 119.99655 * 180.02562 * 8 6 5 10 10 Si 1.86801 * 119.99994 * 0.02562 * 8 6 5 11 11 H 1.48495 * 109.46889 * 90.00281 * 10 8 6 12 12 H 1.48510 * 109.46825 * 210.00042 * 10 8 6 13 13 H 1.48494 * 109.47200 * 329.99914 * 10 8 6 14 14 C 1.34784 * 119.99893 * 90.00297 * 4 3 2 15 15 O 1.21274 * 119.99897 * 179.73022 * 14 4 3 16 16 C 1.50695 * 119.99635 * 0.02562 * 14 4 3 17 17 H 1.08994 * 115.55340 * 34.33159 * 16 14 4 18 18 C 1.53001 * 117.50091 * 248.61979 * 16 14 4 19 19 C 1.53000 * 60.00105 * 252.51523 * 18 16 14 20 20 Cl 1.80297 * 117.49683 * 252.50585 * 19 18 16 21 21 Cl 1.80299 * 117.49936 * 107.49043 * 19 18 16 22 22 H 1.07997 * 120.00252 * 179.97438 * 1 2 3 23 23 H 1.08001 * 119.99691 * 359.97438 * 1 2 3 24 24 H 1.08001 * 119.99691 * 180.02562 * 2 1 3 25 25 H 1.08997 * 109.46951 * 5.00236 * 3 2 1 26 26 H 1.08998 * 109.47681 * 245.00289 * 3 2 1 27 27 H 1.08998 * 109.47416 * 29.99674 * 5 4 3 28 28 H 1.09008 * 109.47058 * 150.00274 * 5 4 3 29 29 H 0.97008 * 119.99482 * 180.02562 * 9 8 6 30 30 H 1.09006 * 117.49589 * 0.02562 * 18 16 14 31 31 H 1.08995 * 117.49915 * 145.02054 * 18 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3099 0.0000 0.0000 3 6 2.0635 1.3050 0.0000 4 7 2.9938 1.3318 1.1314 5 6 2.5589 1.8648 2.4249 6 6 2.8444 3.3435 2.4805 7 1 3.3042 3.8367 1.6369 8 6 2.5196 4.0663 3.6088 9 7 2.7683 5.3568 3.6571 10 14 1.7262 3.2126 5.0687 11 1 2.7829 2.7223 5.9895 12 1 0.8499 4.1725 5.7871 13 1 0.9151 2.0646 4.5899 14 6 4.2498 0.8660 0.9823 15 8 5.0214 0.8927 1.9176 16 6 4.6972 0.3182 -0.3483 17 1 4.2719 0.8069 -1.2249 18 6 4.9679 -1.1849 -0.4387 19 6 6.1346 -0.1953 -0.4536 20 17 6.9951 0.0535 -2.0183 21 17 7.1634 -0.0988 1.0239 22 1 -0.5400 -0.9353 -0.0004 23 1 -0.5400 0.9353 0.0004 24 1 1.8499 -0.9353 -0.0004 25 1 1.3587 2.1316 0.0896 26 1 2.6213 1.4026 -0.9313 27 1 1.4888 1.6965 2.5460 28 1 3.0991 1.3601 3.2260 29 1 2.5401 5.8653 4.4510 30 1 4.8219 -1.7777 0.4644 31 1 4.7204 -1.6855 -1.3747 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292531789.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:18 Heat of formation + Delta-G solvation = 17.584204 kcal Electronic energy + Delta-G solvation = -17385.286796 eV Core-core repulsion = 14335.041089 eV Total energy + Delta-G solvation = -3050.245707 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 277.038 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.72784 -37.20811 -35.99318 -35.70055 -34.97873 -33.19777 -32.14836 -28.60414 -25.74766 -24.47997 -22.44405 -21.52941 -20.08304 -18.53510 -17.45703 -16.90858 -16.08213 -15.32541 -14.77080 -14.61754 -14.35440 -13.56887 -13.19231 -12.96518 -12.82900 -12.47186 -12.33763 -11.98020 -11.76681 -11.66528 -11.26072 -11.07306 -10.96240 -10.74773 -10.55222 -10.42060 -10.16523 -9.87750 -9.58172 -9.30635 -8.87288 -8.60491 -7.82313 -6.10253 -4.09389 1.20453 2.23647 2.31451 2.70632 3.27795 3.33659 3.35690 3.49634 3.69356 4.14312 4.37497 4.38587 4.82604 5.04301 5.12110 5.22634 5.25497 5.31328 5.51295 5.62574 5.90492 6.08252 6.63792 6.66326 6.79303 6.89419 7.26590 7.57950 8.11485 8.43611 8.82855 8.93997 9.49570 11.03034 Molecular weight = 277.04amu Principal moments of inertia in cm(-1) A = 0.018363 B = 0.006144 C = 0.005168 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1524.403722 B = 4556.308916 C = 5416.837026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C -0.169 4.169 3 C 0.134 3.866 4 N -0.581 5.581 5 C 0.219 3.781 6 C -0.530 4.530 7 H 0.075 0.925 8 C 0.074 3.926 9 N -0.896 5.896 10 Si 0.874 3.126 11 H -0.273 1.273 12 H -0.285 1.285 13 H -0.266 1.266 14 C 0.530 3.470 15 O -0.509 6.509 16 C -0.155 4.155 17 H 0.142 0.858 18 C -0.122 4.122 19 C 0.022 3.978 20 Cl -0.101 7.101 21 Cl -0.052 7.052 22 H 0.095 0.905 23 H 0.100 0.900 24 H 0.106 0.894 25 H 0.091 0.909 26 H 0.077 0.923 27 H 0.031 0.969 28 H 0.037 0.963 29 H 0.265 0.735 30 H 0.123 0.877 31 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.342 -14.228 -11.494 18.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.188 4.188 3 C 0.010 3.990 4 N -0.312 5.312 5 C 0.099 3.901 6 C -0.568 4.568 7 H 0.093 0.907 8 C -0.129 4.129 9 N -0.534 5.534 10 Si 0.701 3.299 11 H -0.199 1.199 12 H -0.211 1.211 13 H -0.190 1.190 14 C 0.315 3.685 15 O -0.384 6.384 16 C -0.177 4.177 17 H 0.160 0.840 18 C -0.160 4.160 19 C -0.031 4.031 20 Cl -0.074 7.074 21 Cl -0.025 7.025 22 H 0.113 0.887 23 H 0.118 0.882 24 H 0.124 0.876 25 H 0.109 0.891 26 H 0.095 0.905 27 H 0.049 0.951 28 H 0.055 0.945 29 H 0.075 0.925 30 H 0.141 0.859 31 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.899 -13.985 -10.834 17.714 hybrid contribution -0.332 -0.158 0.634 0.733 sum 0.567 -14.143 -10.200 17.447 Atomic orbital electron populations 1.23852 0.95873 1.01870 1.00427 1.23426 0.96362 0.98978 1.00019 1.20655 0.93136 0.95537 0.89628 1.47826 1.10239 1.59943 1.13148 1.19679 0.94941 0.95203 0.80256 1.21311 1.41265 0.91058 1.03178 0.90668 1.24840 0.95253 0.94708 0.98087 1.69898 1.47680 1.06608 1.29244 0.86880 0.79880 0.79688 0.83431 1.19899 1.21052 1.19038 1.19068 0.82671 0.79211 0.87566 1.90810 1.51532 1.55215 1.40796 1.23235 0.94673 0.98404 1.01393 0.84039 1.23860 0.94570 0.91479 1.06084 1.26336 0.85801 1.09037 0.81899 1.98735 1.80241 1.97260 1.31159 1.98792 1.70189 1.98364 1.35163 0.88710 0.88210 0.87638 0.89085 0.90466 0.95085 0.94472 0.92540 0.85868 0.85682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.05 14.32 29.02 0.42 -1.64 16 2 C -0.17 -2.07 9.85 -36.03 -0.35 -2.42 16 3 C 0.13 1.97 5.67 -5.20 -0.03 1.94 16 4 N -0.58 -11.27 2.44 -176.44 -0.43 -11.70 16 5 C 0.22 5.19 4.23 -5.19 -0.02 5.17 16 6 C -0.53 -14.92 9.94 -34.44 -0.34 -15.26 16 7 H 0.08 2.33 8.06 -52.49 -0.42 1.91 16 8 C 0.07 2.13 5.47 -17.82 -0.10 2.03 16 9 N -0.90 -27.46 13.96 55.43 0.77 -26.69 16 10 Si 0.87 21.37 27.47 -169.99 -4.67 16.70 16 11 H -0.27 -6.75 7.11 56.52 0.40 -6.35 16 12 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 13 H -0.27 -6.10 6.54 56.52 0.37 -5.73 16 14 C 0.53 10.11 7.45 -10.98 -0.08 10.03 16 15 O -0.51 -11.68 13.28 5.56 0.07 -11.61 16 16 C -0.15 -2.13 5.13 -91.77 -0.47 -2.60 16 17 H 0.14 1.64 6.44 -51.93 -0.33 1.31 16 18 C -0.12 -1.29 9.92 -26.73 -0.27 -1.55 16 19 C 0.02 0.29 3.61 -26.73 -0.10 0.20 16 20 Cl -0.10 -1.23 29.29 -51.86 -1.52 -2.75 16 21 Cl -0.05 -0.87 26.13 -51.86 -1.35 -2.22 16 22 H 0.09 0.90 8.06 -52.49 -0.42 0.48 16 23 H 0.10 1.12 7.84 -52.49 -0.41 0.71 16 24 H 0.11 1.17 8.06 -52.49 -0.42 0.75 16 25 H 0.09 1.42 7.72 -51.93 -0.40 1.02 16 26 H 0.08 0.94 5.99 -51.93 -0.31 0.63 16 27 H 0.03 0.71 7.13 -51.93 -0.37 0.34 16 28 H 0.04 0.94 6.85 -51.92 -0.36 0.59 16 29 H 0.26 7.59 8.31 -40.82 -0.34 7.25 16 30 H 0.12 1.31 8.14 -51.93 -0.42 0.89 16 31 H 0.13 0.92 8.14 -51.93 -0.42 0.50 16 LS Contribution 299.65 15.07 4.52 4.52 Total: -1.00 -32.60 299.65 -7.42 -40.02 By element: Atomic # 1 Polarization: 1.31 SS G_CDS: -3.46 Total: -2.16 kcal Atomic # 6 Polarization: -2.77 SS G_CDS: -1.34 Total: -4.11 kcal Atomic # 7 Polarization: -38.73 SS G_CDS: 0.34 Total: -38.39 kcal Atomic # 8 Polarization: -11.68 SS G_CDS: 0.07 Total: -11.61 kcal Atomic # 14 Polarization: 21.37 SS G_CDS: -4.67 Total: 16.70 kcal Atomic # 17 Polarization: -2.10 SS G_CDS: -2.87 Total: -4.98 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -32.60 -7.42 -40.02 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292531789.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.601 kcal (2) G-P(sol) polarization free energy of solvation -32.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.016 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds