Wall clock time and date at job start Mon Mar 30 2020 01:31:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86803 * 120.00112 * 2 1 4 4 H 1.48500 * 109.46986 * 270.00107 * 3 2 1 5 5 H 1.48496 * 109.47029 * 30.00124 * 3 2 1 6 6 H 1.48499 * 109.47352 * 149.99954 * 3 2 1 7 7 C 1.37885 * 120.00035 * 179.97438 * 2 1 3 8 8 H 1.07991 * 119.99806 * 0.02562 * 7 2 1 9 9 C 1.50697 * 119.99686 * 179.72339 * 7 2 1 10 10 N 1.46507 * 109.47006 * 179.97438 * 9 7 2 11 11 C 1.39926 * 120.00020 * 180.02562 * 10 9 7 12 12 C 1.38881 * 120.01629 * 180.02562 * 11 10 9 13 13 C 1.38111 * 120.00598 * 180.02562 * 12 11 10 14 14 C 1.38678 * 120.02860 * 359.97438 * 13 12 11 15 15 O 1.36027 * 119.98381 * 180.02562 * 14 13 12 16 16 C 1.42903 * 117.00062 * 0.02562 * 15 14 13 17 17 F 1.39893 * 109.46914 * 299.99913 * 16 15 14 18 18 F 1.39902 * 109.46847 * 59.99990 * 16 15 14 19 19 C 1.38786 * 120.03075 * 0.02562 * 14 13 12 20 20 Cl 1.73600 * 120.00006 * 180.02562 * 19 14 13 21 21 C 1.38217 * 119.99746 * 359.72080 * 19 14 13 22 22 H 0.97000 * 119.99706 * 359.97438 * 1 2 3 23 23 H 1.08998 * 109.47683 * 300.00180 * 9 7 2 24 24 H 1.09001 * 109.47048 * 60.00389 * 9 7 2 25 25 H 0.97004 * 119.99551 * 0.02562 * 10 9 7 26 26 H 1.08003 * 119.99274 * 0.02562 * 12 11 10 27 27 H 1.08001 * 119.98934 * 180.02562 * 13 12 11 28 28 H 1.09002 * 109.47121 * 179.97438 * 16 15 14 29 29 H 1.08005 * 120.01636 * 180.29370 * 21 19 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 2.4967 2.0464 -1.4001 5 1 1.4467 2.6526 0.7000 6 1 3.5467 1.4402 0.7000 7 6 2.0046 -1.1941 0.0005 8 1 1.4646 -2.1293 0.0005 9 6 3.5115 -1.1940 -0.0058 10 7 3.9999 -2.5753 -0.0032 11 6 5.3757 -2.8309 -0.0076 12 6 5.8390 -4.1402 -0.0057 13 6 7.1969 -4.3922 -0.0095 14 6 8.0984 -3.3384 -0.0157 15 8 9.4356 -3.5878 -0.0199 16 6 9.8400 -4.9584 -0.0183 17 9 9.3436 -5.5896 1.1272 18 9 9.3353 -5.5948 -1.1573 19 6 7.6368 -2.0296 -0.0176 20 17 8.7660 -0.7110 -0.0260 21 6 6.2781 -1.7760 -0.0191 22 1 -0.4850 0.8401 0.0004 23 1 3.8712 -0.6827 -0.8987 24 1 3.8785 -0.6777 0.8813 25 1 3.3696 -3.3126 0.0015 26 1 5.1373 -4.9612 -0.0014 27 1 7.5569 -5.4105 -0.0085 28 1 10.9285 -5.0160 -0.0225 29 1 5.9186 -0.7575 -0.0253 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000819397242.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:31:20 Heat of formation + Delta-G solvation = -125.730716 kcal Electronic energy + Delta-G solvation = -18764.916666 eV Core-core repulsion = 15156.659677 eV Total energy + Delta-G solvation = -3608.256989 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 277.042 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -49.44305 -47.43505 -39.87957 -37.86300 -36.38462 -34.73143 -32.55574 -30.68528 -29.39599 -27.22998 -25.52458 -23.30916 -22.13898 -21.11128 -19.02164 -18.10871 -17.99576 -17.73008 -16.22549 -16.19167 -15.26445 -14.74611 -14.48424 -14.35920 -14.11260 -13.78744 -13.59789 -13.48343 -13.45413 -13.33357 -12.76003 -12.34132 -12.29800 -12.03777 -11.45330 -11.09776 -10.94668 -10.82887 -10.66401 -10.05401 -9.56930 -9.34293 -8.75801 -8.68784 -6.81442 -6.28396 -4.31293 1.33085 1.65321 2.26925 2.57715 3.18322 3.26071 3.27897 3.36428 3.86237 4.14942 4.18615 4.24695 4.53829 4.87811 5.05850 5.06074 5.39718 5.60853 5.83806 5.90883 6.31054 6.42291 6.46790 6.64489 6.89233 7.02469 7.27923 7.75064 8.26696 8.42373 8.72840 9.30069 10.83829 Molecular weight = 277.04amu Principal moments of inertia in cm(-1) A = 0.027994 B = 0.004530 C = 0.003999 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 999.986090 B = 6179.558196 C = 6999.740894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.890 5.890 2 C 0.077 3.923 3 Si 0.877 3.123 4 H -0.272 1.272 5 H -0.282 1.282 6 H -0.262 1.262 7 C -0.543 4.543 8 H 0.079 0.921 9 C 0.220 3.780 10 N -0.715 5.715 11 C 0.228 3.772 12 C -0.172 4.172 13 C -0.122 4.122 14 C 0.025 3.975 15 O -0.315 6.315 16 C 0.411 3.589 17 F -0.202 7.202 18 F -0.202 7.202 19 C 0.009 3.991 20 Cl -0.066 7.066 21 C -0.172 4.172 22 H 0.268 0.732 23 H 0.016 0.984 24 H 0.021 0.979 25 H 0.401 0.599 26 H 0.130 0.870 27 H 0.135 0.865 28 H 0.176 0.824 29 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.617 -8.193 -0.023 21.259 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.527 5.527 2 C -0.127 4.127 3 Si 0.703 3.297 4 H -0.198 1.198 5 H -0.208 1.208 6 H -0.187 1.187 7 C -0.581 4.581 8 H 0.097 0.903 9 C 0.097 3.903 10 N -0.338 5.338 11 C 0.118 3.882 12 C -0.195 4.195 13 C -0.142 4.142 14 C -0.020 4.020 15 O -0.233 6.233 16 C 0.321 3.679 17 F -0.184 7.184 18 F -0.184 7.184 19 C -0.019 4.019 20 Cl -0.037 7.037 21 C -0.197 4.197 22 H 0.078 0.922 23 H 0.034 0.966 24 H 0.039 0.961 25 H 0.236 0.764 26 H 0.148 0.852 27 H 0.152 0.848 28 H 0.193 0.807 29 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 19.542 -7.611 -0.023 20.972 hybrid contribution -0.031 0.427 -0.018 0.429 sum 19.511 -7.184 -0.040 20.792 Atomic orbital electron populations 1.69875 1.06240 1.27490 1.49112 1.24820 0.94817 0.99148 0.93897 0.86826 0.80485 0.83361 0.79003 1.19760 1.20761 1.18666 1.21018 0.88402 0.95263 1.53405 0.90257 1.19575 0.95965 0.78933 0.95835 1.45266 1.01287 1.09969 1.77297 1.17859 0.85646 0.92328 0.92400 1.20468 0.94916 0.95196 1.08932 1.21080 0.93265 0.97570 1.02278 1.18014 0.81377 0.92531 1.10127 1.86618 1.22470 1.24523 1.89650 1.23275 0.96985 0.75894 0.71786 1.93087 1.90374 1.82928 1.51977 1.93089 1.90124 1.82711 1.52450 1.19754 0.90159 0.85622 1.06352 1.98342 1.61301 1.47105 1.96951 1.20378 0.89310 0.99983 1.09992 0.92165 0.96613 0.96135 0.76390 0.85221 0.84765 0.80715 0.84084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.89 -26.02 13.96 55.43 0.77 -25.25 15 2 C 0.08 2.13 5.47 -17.82 -0.10 2.03 15 3 Si 0.88 20.42 27.47 -169.99 -4.67 15.75 15 4 H -0.27 -6.24 7.11 56.52 0.40 -5.84 15 5 H -0.28 -6.53 7.11 56.52 0.40 -6.13 15 6 H -0.26 -5.84 6.54 56.52 0.37 -5.47 15 7 C -0.54 -14.49 9.83 -34.44 -0.34 -14.83 15 8 H 0.08 2.25 7.84 -52.49 -0.41 1.84 15 9 C 0.22 4.98 3.74 -5.19 -0.02 4.96 15 10 N -0.71 -13.84 5.73 -59.76 -0.34 -14.19 15 11 C 0.23 3.99 6.66 -83.70 -0.56 3.43 15 12 C -0.17 -2.61 9.89 -39.39 -0.39 -3.00 15 13 C -0.12 -1.77 8.25 -39.47 -0.33 -2.10 15 14 C 0.02 0.37 6.48 -39.22 -0.25 0.12 15 15 O -0.31 -4.04 9.89 -19.83 -0.20 -4.23 15 16 C 0.41 3.78 5.98 101.05 0.60 4.38 15 17 F -0.20 -2.16 15.58 2.25 0.04 -2.12 15 18 F -0.20 -2.16 15.58 2.25 0.04 -2.12 15 19 C 0.01 0.15 6.33 -39.39 -0.25 -0.10 15 20 Cl -0.07 -0.97 28.49 -51.86 -1.48 -2.45 15 21 C -0.17 -3.01 9.09 -39.37 -0.36 -3.37 15 22 H 0.27 7.33 8.31 -40.82 -0.34 6.99 15 23 H 0.02 0.37 7.38 -51.93 -0.38 -0.02 15 24 H 0.02 0.48 7.00 -51.93 -0.36 0.12 15 25 H 0.40 7.31 8.34 -40.82 -0.34 6.97 15 26 H 0.13 1.70 8.06 -52.48 -0.42 1.27 15 27 H 0.13 1.73 5.09 -52.49 -0.27 1.46 15 28 H 0.18 0.70 8.14 -51.93 -0.42 0.28 15 29 H 0.14 2.53 6.73 -52.48 -0.35 2.18 15 LS Contribution 276.05 15.07 4.16 4.16 Total: -1.00 -29.47 276.05 -5.80 -35.26 By element: Atomic # 1 Polarization: 5.79 SS G_CDS: -2.13 Total: 3.66 kcal Atomic # 6 Polarization: -6.49 SS G_CDS: -1.99 Total: -8.47 kcal Atomic # 7 Polarization: -39.86 SS G_CDS: 0.43 Total: -39.43 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -0.20 Total: -4.23 kcal Atomic # 9 Polarization: -4.31 SS G_CDS: 0.07 Total: -4.24 kcal Atomic # 14 Polarization: 20.42 SS G_CDS: -4.67 Total: 15.75 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -1.48 Total: -2.45 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -29.47 -5.80 -35.26 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000819397242.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.466 kcal (2) G-P(sol) polarization free energy of solvation -29.466 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.932 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds