Wall clock time and date at job start Mon Mar 30 2020 01:57:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08996 * 109.46915 * 2 1 4 4 C 1.50697 * 109.47315 * 120.00327 * 2 1 3 5 5 O 1.21305 * 120.00005 * 119.99748 * 4 2 1 6 6 N 1.34779 * 119.99968 * 300.00036 * 4 2 1 7 7 C 1.40586 * 120.00116 * 180.02562 * 6 4 2 8 8 C 1.40657 * 126.08252 * 359.97039 * 7 6 4 9 9 N 1.30913 * 108.38554 * 179.77427 * 8 7 6 10 10 N 1.40060 * 108.40658 * 0.38728 * 9 8 7 11 11 C 1.37327 * 126.06997 * 179.87349 * 10 9 8 12 12 H 1.07998 * 120.00582 * 185.44908 * 11 10 9 13 13 C 1.38989 * 119.99638 * 5.17669 * 11 10 9 14 14 N 1.31295 * 120.00227 * 354.31128 * 13 11 10 15 15 Si 1.86794 * 119.99993 * 174.31104 * 13 11 10 16 16 H 1.48498 * 109.47527 * 94.97968 * 15 13 11 17 17 H 1.48507 * 109.47412 * 214.98035 * 15 13 11 18 18 H 1.48504 * 109.47189 * 334.98217 * 15 13 11 19 19 C 1.35681 * 126.08287 * 179.97438 * 7 6 4 20 20 C 1.53007 * 109.46589 * 240.00106 * 2 1 3 21 21 F 1.39900 * 109.47230 * 299.99844 * 20 2 1 22 22 F 1.39903 * 109.46897 * 60.00104 * 20 2 1 23 23 F 1.39901 * 109.46642 * 179.97438 * 20 2 1 24 24 H 1.09000 * 109.47185 * 299.99865 * 1 2 3 25 25 H 1.08997 * 109.47762 * 59.99834 * 1 2 3 26 26 H 1.09004 * 109.47185 * 180.02562 * 1 2 3 27 27 H 0.97005 * 119.99650 * 359.97438 * 6 4 2 28 28 H 1.07991 * 125.80439 * 0.02562 * 8 7 6 29 29 H 0.96997 * 120.00133 * 179.97438 * 14 13 11 30 30 H 1.07998 * 126.24575 * 0.02562 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0324 -0.7105 1.2304 5 8 2.7297 -1.6967 1.1190 6 7 1.7068 -0.2501 2.4545 7 6 2.1759 -0.9125 3.6024 8 6 2.9879 -2.0608 3.6224 9 7 3.2205 -2.3803 4.8705 10 7 2.5618 -1.4580 5.6933 11 6 2.5612 -1.4557 7.0665 12 1 1.9473 -0.7490 7.6052 13 6 3.3463 -2.3667 7.7633 14 7 4.0014 -3.3008 7.1135 15 14 3.4697 -2.2620 9.6242 16 1 2.4802 -3.1833 10.2385 17 1 4.8381 -2.6487 10.0522 18 1 3.1887 -0.8709 10.0615 19 6 1.9258 -0.5579 4.8880 20 6 2.0399 -0.7213 -1.2494 21 9 1.5735 -2.0403 -1.2493 22 9 1.5735 -0.0617 -2.3916 23 9 3.4389 -0.7208 -1.2497 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 0.0005 27 1 1.1494 0.5388 2.5435 28 1 3.3598 -2.5868 2.7557 29 1 4.5496 -3.9363 7.5997 30 1 1.3312 0.2824 5.2144 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000742600566.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:57:42 Heat of formation + Delta-G solvation = -108.620106 kcal Electronic energy + Delta-G solvation = -21452.774553 eV Core-core repulsion = 17449.215912 eV Total energy + Delta-G solvation = -4003.558641 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 277.078 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -50.01915 -47.55397 -47.39831 -40.08792 -38.81589 -34.41056 -34.07467 -33.05427 -30.26847 -27.84362 -26.52549 -25.08384 -23.41093 -21.11320 -20.40217 -19.50214 -18.63525 -18.35615 -17.50870 -17.40323 -16.30098 -15.49908 -15.18482 -15.12235 -14.47148 -14.22046 -14.08434 -13.86458 -13.71417 -13.58781 -13.54342 -13.34070 -13.12339 -12.96764 -12.50742 -12.08983 -11.72500 -11.54791 -11.43384 -11.28714 -10.99319 -10.55270 -10.26311 -9.38567 -9.21869 -8.85569 -8.10817 -6.78533 -6.59856 -4.27400 2.60281 2.63180 2.97139 3.03088 3.08836 3.28566 3.60231 3.69653 3.81202 4.03232 4.23579 4.36324 4.62907 4.73243 4.85924 4.97799 5.02165 5.25046 5.40604 5.76572 6.18239 6.37598 6.79798 6.90121 7.00220 7.17908 7.80893 8.02024 8.20620 8.50696 8.71320 9.32948 9.61864 10.36311 Molecular weight = 277.08amu Principal moments of inertia in cm(-1) A = 0.052014 B = 0.003801 C = 0.003652 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 538.187483 B = 7364.086721 C = 7666.113746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.159 4.159 3 H 0.135 0.865 4 C 0.504 3.496 5 O -0.517 6.517 6 N -0.612 5.612 7 C -0.065 4.065 8 C -0.029 4.029 9 N -0.261 5.261 10 N -0.141 5.141 11 C -0.324 4.324 12 H 0.117 0.883 13 C 0.047 3.953 14 N -0.768 5.768 15 Si 0.934 3.066 16 H -0.271 1.271 17 H -0.275 1.275 18 H -0.263 1.263 19 C -0.081 4.081 20 C 0.474 3.526 21 F -0.171 7.171 22 F -0.186 7.186 23 F -0.172 7.172 24 H 0.083 0.917 25 H 0.079 0.921 26 H 0.076 0.924 27 H 0.398 0.602 28 H 0.176 0.824 29 H 0.275 0.725 30 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.048 8.936 -10.725 15.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.182 4.182 3 H 0.153 0.847 4 C 0.287 3.713 5 O -0.393 6.393 6 N -0.254 5.254 7 C -0.170 4.170 8 C -0.205 4.205 9 N -0.092 5.092 10 N 0.092 4.908 11 C -0.457 4.457 12 H 0.135 0.865 13 C -0.170 4.170 14 N -0.394 5.394 15 Si 0.758 3.242 16 H -0.196 1.196 17 H -0.200 1.200 18 H -0.187 1.187 19 C -0.232 4.232 20 C 0.419 3.581 21 F -0.152 7.152 22 F -0.168 7.168 23 F -0.154 7.154 24 H 0.102 0.898 25 H 0.098 0.902 26 H 0.095 0.905 27 H 0.232 0.768 28 H 0.193 0.807 29 H 0.086 0.914 30 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -5.784 7.174 -9.997 13.597 hybrid contribution -0.603 1.089 0.077 1.248 sum -6.387 8.263 -9.920 14.404 Atomic orbital electron populations 1.21844 0.89634 1.04809 1.04457 1.22582 1.01029 1.02821 0.91769 0.84709 1.19452 0.82543 0.85627 0.83656 1.90714 1.37356 1.25560 1.85641 1.42273 1.50126 1.29463 1.03586 1.17228 1.13303 1.02130 0.84366 1.24124 1.02374 0.97504 0.96473 1.78275 1.19566 1.12790 0.98550 1.44570 1.26795 1.14313 1.05124 1.19891 1.28611 1.20379 0.76783 0.86546 1.25650 0.95301 0.94718 1.01374 1.70218 1.21496 1.11134 1.36568 0.85816 0.78450 0.79378 0.80541 1.19636 1.20004 1.18724 1.21241 1.11142 1.01642 0.89205 1.19758 0.76030 0.77955 0.84333 1.93210 1.88262 1.37092 1.96630 1.93162 1.88650 1.80951 1.54010 1.93223 1.29170 1.96345 1.96632 0.89786 0.90248 0.90454 0.76824 0.80691 0.91386 0.83613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.26 8.85 37.16 0.33 -0.93 16 2 C -0.16 -1.79 2.71 -91.77 -0.25 -2.04 16 3 H 0.14 1.09 8.14 -51.93 -0.42 0.67 16 4 C 0.50 8.31 6.89 -10.99 -0.08 8.23 16 5 O -0.52 -10.89 11.99 5.54 0.07 -10.82 16 6 N -0.61 -10.10 5.36 -10.00 -0.05 -10.15 16 7 C -0.06 -1.45 6.90 -83.84 -0.58 -2.03 16 8 C -0.03 -0.76 10.85 -17.03 -0.18 -0.95 16 9 N -0.26 -7.54 10.42 30.80 0.32 -7.22 16 10 N -0.14 -3.80 3.74 -11.41 -0.04 -3.85 16 11 C -0.32 -8.45 10.24 -14.81 -0.15 -8.61 16 12 H 0.12 2.69 7.84 -52.49 -0.41 2.28 16 13 C 0.05 1.20 5.50 -17.50 -0.10 1.11 16 14 N -0.77 -21.32 11.83 55.50 0.66 -20.66 16 15 Si 0.93 18.65 29.55 -169.99 -5.02 13.63 16 16 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 17 H -0.28 -5.47 7.11 56.52 0.40 -5.07 16 18 H -0.26 -5.01 7.11 56.52 0.40 -4.61 16 19 C -0.08 -1.85 11.49 -16.39 -0.19 -2.04 16 20 C 0.47 6.31 2.42 37.16 0.09 6.40 16 21 F -0.17 -2.62 15.88 2.25 0.04 -2.58 16 22 F -0.19 -2.14 16.80 2.25 0.04 -2.11 16 23 F -0.17 -2.68 16.40 2.25 0.04 -2.64 16 24 H 0.08 0.56 7.56 -51.93 -0.39 0.16 16 25 H 0.08 0.52 7.80 -51.93 -0.41 0.11 16 26 H 0.08 0.76 7.80 -51.93 -0.41 0.35 16 27 H 0.40 4.75 8.24 -40.82 -0.34 4.41 16 28 H 0.18 4.56 5.92 -52.49 -0.31 4.25 16 29 H 0.28 6.99 8.31 -40.82 -0.34 6.65 16 30 H 0.15 2.72 8.06 -52.49 -0.42 2.30 16 LS Contribution 278.81 15.07 4.20 4.20 Total: -1.00 -33.34 278.81 -3.11 -36.45 By element: Atomic # 1 Polarization: 8.84 SS G_CDS: -2.24 Total: 6.59 kcal Atomic # 6 Polarization: 0.25 SS G_CDS: -1.11 Total: -0.85 kcal Atomic # 7 Polarization: -42.75 SS G_CDS: 0.88 Total: -41.87 kcal Atomic # 8 Polarization: -10.89 SS G_CDS: 0.07 Total: -10.82 kcal Atomic # 9 Polarization: -7.44 SS G_CDS: 0.11 Total: -7.33 kcal Atomic # 14 Polarization: 18.65 SS G_CDS: -5.02 Total: 13.63 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -33.34 -3.11 -36.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000742600566.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.168 kcal (2) G-P(sol) polarization free energy of solvation -33.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.452 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.620 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds