Wall clock time and date at job start Mon Mar 30 2020 02:02:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35514 * 116.99901 * 2 1 4 4 C 1.39440 * 120.46363 * 179.97438 * 3 2 1 5 5 C 1.38194 * 118.50515 * 180.02562 * 4 3 2 6 6 C 1.50701 * 120.36617 * 179.97438 * 5 4 3 7 7 F 1.39896 * 109.47405 * 89.99516 * 6 5 4 8 8 F 1.39900 * 109.47264 * 210.00070 * 6 5 4 9 9 F 1.39900 * 109.46803 * 329.99679 * 6 5 4 10 10 N 1.32461 * 119.27144 * 359.72803 * 5 4 3 11 11 C 1.32472 * 120.88536 * 0.54876 * 10 5 4 12 12 N 1.38390 * 119.18830 * 179.71719 * 11 10 5 13 13 C 1.46500 * 120.00090 * 179.73047 * 12 11 10 14 14 C 1.50706 * 109.46949 * 179.97438 * 13 12 11 15 15 H 1.07995 * 120.00167 * 359.72205 * 14 13 12 16 16 C 1.37879 * 119.99394 * 179.97438 * 14 13 12 17 17 N 1.31514 * 119.99350 * 179.97438 * 16 14 13 18 18 Si 1.86798 * 120.00608 * 0.02562 * 16 14 13 19 19 H 1.48500 * 109.47353 * 89.99430 * 18 16 14 20 20 H 1.48494 * 109.47031 * 209.99977 * 18 16 14 21 21 H 1.48504 * 109.46680 * 329.99678 * 18 16 14 22 22 N 1.32482 * 121.62274 * 359.43970 * 11 10 5 23 23 H 1.09007 * 109.46845 * 300.00147 * 1 2 3 24 24 H 1.08996 * 109.47479 * 59.99430 * 1 2 3 25 25 H 1.08992 * 109.47223 * 180.02562 * 1 2 3 26 26 H 1.07992 * 120.74495 * 0.04207 * 4 3 2 27 27 H 0.97010 * 120.00000 * 359.73307 * 12 11 10 28 28 H 1.09000 * 109.47175 * 60.00008 * 13 12 11 29 29 H 1.09001 * 109.47297 * 299.99516 * 13 12 11 30 30 H 0.97005 * 119.99656 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0442 1.2075 0.0000 4 6 3.4361 1.2917 0.0005 5 6 4.0210 2.5438 0.0011 6 6 5.5215 2.6836 0.0022 7 9 5.9869 2.7269 -1.3163 8 9 5.8793 3.8642 0.6621 9 9 6.0913 1.5895 0.6622 10 7 3.2483 3.6196 -0.0045 11 6 1.9282 3.5088 0.0005 12 7 1.1546 4.6562 0.0004 13 6 -0.3069 4.5543 -0.0002 14 6 -0.9068 5.9368 0.0005 15 1 -0.2638 6.8045 0.0058 16 6 -2.2766 6.0938 -0.0004 17 7 -2.8002 7.3002 0.0007 18 14 -3.3889 4.5930 -0.0018 19 1 -3.6845 4.1947 1.3979 20 1 -4.6572 4.9175 -0.7025 21 1 -2.7089 3.4737 -0.7018 22 7 1.3304 2.3265 0.0000 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0276 0.0005 26 1 4.0432 0.3986 0.0003 27 1 1.5800 5.5281 0.0007 28 1 -0.6340 4.0163 0.8896 29 1 -0.6333 4.0167 -0.8904 30 1 -3.7639 7.4107 0.0004 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000858517740.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:02:17 Heat of formation + Delta-G solvation = -127.266988 kcal Electronic energy + Delta-G solvation = -21288.704445 eV Core-core repulsion = 17284.337214 eV Total energy + Delta-G solvation = -4004.367231 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 277.078 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -50.23573 -47.78226 -47.66438 -41.14391 -38.61820 -35.83086 -33.37001 -32.75448 -31.08538 -28.28854 -27.57942 -26.45663 -23.42955 -23.03779 -21.55811 -19.30298 -18.86135 -18.60851 -17.83423 -17.31213 -16.50273 -16.25356 -15.72813 -15.44791 -14.81355 -14.73200 -14.51700 -14.43325 -14.31235 -14.13294 -13.83539 -13.82276 -13.49503 -12.95808 -12.59530 -12.52617 -12.04300 -11.73620 -11.15650 -11.08771 -10.84470 -10.54477 -10.09722 -9.65305 -9.57166 -9.32534 -8.83592 -7.72696 -6.31953 -4.35721 0.80509 1.29361 2.20972 2.88261 3.14099 3.17555 3.25100 3.25411 3.52952 3.73274 4.02033 4.20614 4.32890 4.40735 4.91825 5.02292 5.13878 5.23150 5.29119 5.30126 5.57133 5.84991 6.52900 6.77657 6.86643 6.92239 7.16805 7.38815 7.79817 8.27318 8.46021 8.69721 9.25267 10.80028 Molecular weight = 277.08amu Principal moments of inertia in cm(-1) A = 0.021786 B = 0.005118 C = 0.004261 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1284.933217 B = 5469.107519 C = 6568.943651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.298 6.298 3 C 0.414 3.586 4 C -0.281 4.281 5 C 0.160 3.840 6 C 0.530 3.470 7 F -0.168 7.168 8 F -0.160 7.160 9 F -0.168 7.168 10 N -0.563 5.563 11 C 0.607 3.393 12 N -0.653 5.653 13 C 0.234 3.766 14 C -0.549 4.549 15 H 0.082 0.918 16 C 0.080 3.920 17 N -0.888 5.888 18 Si 0.878 3.122 19 H -0.272 1.272 20 H -0.282 1.282 21 H -0.261 1.261 22 N -0.600 5.600 23 H 0.065 0.935 24 H 0.065 0.935 25 H 0.100 0.900 26 H 0.156 0.844 27 H 0.417 0.583 28 H 0.024 0.976 29 H 0.029 0.971 30 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.599 -14.089 0.010 18.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.202 6.202 3 C 0.222 3.778 4 C -0.310 4.310 5 C 0.010 3.990 6 C 0.474 3.526 7 F -0.149 7.149 8 F -0.141 7.141 9 F -0.150 7.150 10 N -0.291 5.291 11 C 0.249 3.751 12 N -0.283 5.283 13 C 0.112 3.888 14 C -0.587 4.587 15 H 0.100 0.900 16 C -0.124 4.124 17 N -0.524 5.524 18 Si 0.704 3.296 19 H -0.198 1.198 20 H -0.208 1.208 21 H -0.186 1.186 22 N -0.341 5.341 23 H 0.084 0.916 24 H 0.084 0.916 25 H 0.118 0.882 26 H 0.174 0.826 27 H 0.256 0.744 28 H 0.042 0.958 29 H 0.047 0.953 30 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 10.662 -13.378 0.001 17.107 hybrid contribution -0.139 -0.903 0.018 0.913 sum 10.523 -14.281 0.018 17.739 Atomic orbital electron populations 1.23008 0.76240 1.03222 1.03517 1.86215 1.23711 1.23650 1.86589 1.19514 0.88422 0.84523 0.85319 1.20892 0.93252 0.98842 1.18027 1.20566 0.92794 0.89831 0.95852 1.17686 0.86380 0.74249 0.74298 1.93242 1.89876 1.96118 1.35676 1.93251 1.92817 1.47367 1.80712 1.93215 1.86227 1.54492 1.81035 1.67456 1.04932 1.31941 1.24736 1.18891 0.83692 0.86155 0.86350 1.44978 1.07582 1.03550 1.72217 1.19618 0.73523 0.98684 0.97022 1.21047 0.92813 0.90918 1.53932 0.89981 1.24763 0.97704 0.96155 0.93808 1.69873 1.12394 1.21384 1.48769 0.86814 0.80456 0.83358 0.78990 1.19796 1.20783 1.18552 1.67629 1.40539 0.97816 1.28084 0.91639 0.91623 0.88206 0.82642 0.74425 0.95779 0.95295 0.92079 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.41 10.41 101.05 1.05 1.46 16 2 O -0.30 -4.07 10.49 -18.24 -0.19 -4.26 16 3 C 0.41 6.48 7.53 -16.72 -0.13 6.36 16 4 C -0.28 -3.93 9.46 -39.15 -0.37 -4.30 16 5 C 0.16 2.43 6.31 -82.34 -0.52 1.91 16 6 C 0.53 6.98 3.45 36.01 0.12 7.11 16 7 F -0.17 -2.18 17.30 2.25 0.04 -2.14 16 8 F -0.16 -2.26 17.07 2.25 0.04 -2.23 16 9 F -0.17 -1.96 16.52 2.25 0.04 -1.92 16 10 N -0.56 -9.99 10.12 -10.23 -0.10 -10.10 16 11 C 0.61 11.59 8.42 -322.87 -2.72 8.87 16 12 N -0.65 -13.29 5.70 -63.50 -0.36 -13.65 16 13 C 0.23 5.34 4.47 -5.19 -0.02 5.31 16 14 C -0.55 -14.51 9.83 -34.44 -0.34 -14.85 16 15 H 0.08 2.31 7.84 -52.49 -0.41 1.90 16 16 C 0.08 2.18 5.47 -17.82 -0.10 2.08 16 17 N -0.89 -25.63 13.96 55.43 0.77 -24.86 16 18 Si 0.88 20.03 27.47 -169.99 -4.67 15.36 16 19 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 20 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 21 H -0.26 -5.71 6.54 56.52 0.37 -5.34 16 22 N -0.60 -10.96 8.52 -13.99 -0.12 -11.08 16 23 H 0.06 0.81 8.12 -51.93 -0.42 0.39 16 24 H 0.07 0.82 8.12 -51.93 -0.42 0.40 16 25 H 0.10 0.81 8.14 -51.93 -0.42 0.39 16 26 H 0.16 1.73 7.67 -52.49 -0.40 1.33 16 27 H 0.42 8.12 8.44 -40.82 -0.34 7.78 16 28 H 0.02 0.56 7.57 -51.93 -0.39 0.17 16 29 H 0.03 0.68 7.20 -51.93 -0.37 0.31 16 30 H 0.27 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 284.67 15.07 4.29 4.29 Total: -1.00 -28.48 284.67 -5.64 -34.13 By element: Atomic # 1 Polarization: 4.87 SS G_CDS: -2.36 Total: 2.52 kcal Atomic # 6 Polarization: 16.96 SS G_CDS: -3.02 Total: 13.94 kcal Atomic # 7 Polarization: -59.87 SS G_CDS: 0.19 Total: -59.68 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -0.19 Total: -4.26 kcal Atomic # 9 Polarization: -6.41 SS G_CDS: 0.11 Total: -6.29 kcal Atomic # 14 Polarization: 20.03 SS G_CDS: -4.67 Total: 15.36 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -28.48 -5.64 -34.13 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000858517740.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.139 kcal (2) G-P(sol) polarization free energy of solvation -28.484 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds