Wall clock time and date at job start Mon Mar 30 2020 01:38:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39619 * 120.54968 * 308.73766 * 3 2 1 5 5 N 1.31662 * 120.56726 * 179.72495 * 4 3 2 6 6 C 1.32062 * 121.86967 * 0.02562 * 5 4 3 7 7 Cl 1.73595 * 119.47054 * 179.97438 * 6 5 4 8 8 C 1.38508 * 121.05890 * 359.97438 * 6 5 4 9 9 C 1.50703 * 120.34522 * 179.97438 * 8 6 5 10 10 N 1.46500 * 109.47191 * 278.63842 * 9 8 6 11 11 C 1.36931 * 119.99870 * 96.12207 * 10 9 8 12 12 H 1.08000 * 119.99859 * 223.41083 * 11 10 9 13 13 C 1.38809 * 120.00193 * 43.42334 * 11 10 9 14 14 N 1.31622 * 119.99928 * 207.91245 * 13 11 10 15 15 Si 1.86798 * 120.00260 * 27.91140 * 13 11 10 16 16 H 1.48503 * 109.47147 * 94.42341 * 15 13 11 17 17 H 1.48494 * 109.47294 * 214.42739 * 15 13 11 18 18 H 1.48503 * 109.46954 * 334.42430 * 15 13 11 19 19 C 1.46500 * 119.99517 * 276.12041 * 10 9 8 20 20 C 1.53003 * 117.49518 * 183.42384 * 19 10 9 21 21 C 1.53001 * 117.49640 * 114.76570 * 19 10 9 22 22 C 1.38294 * 119.30283 * 0.02562 * 8 6 5 23 23 H 1.07997 * 119.71729 * 359.74997 * 4 3 2 24 24 H 1.09001 * 109.47034 * 38.63961 * 9 8 6 25 25 H 1.09000 * 109.46820 * 158.63440 * 9 8 6 26 26 H 0.97002 * 120.00149 * 179.97438 * 14 13 11 27 27 H 1.08997 * 115.55359 * 329.09205 * 19 10 9 28 28 H 1.09002 * 117.49705 * 359.97438 * 20 19 10 29 29 H 1.09005 * 117.50191 * 145.02515 * 20 19 10 30 30 H 1.09005 * 117.49769 * 214.97783 * 21 19 10 31 31 H 1.08994 * 117.49964 * 359.97193 * 21 19 10 32 32 H 1.08000 * 120.84502 * 179.97438 * 22 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2780 -0.7514 0.9379 5 7 4.5946 -0.7554 0.9348 6 6 5.2919 -0.0574 0.0569 7 17 7.0263 -0.1073 0.1101 8 6 4.6616 0.7139 -0.9055 9 6 5.4732 1.5046 -1.8991 10 7 5.9151 2.7576 -1.2818 11 6 7.1621 2.8427 -0.7225 12 1 7.2934 3.3295 0.2326 13 6 8.2574 2.3036 -1.3831 14 7 9.2974 1.8805 -0.6962 15 14 8.2554 2.1783 -3.2469 16 1 8.9265 3.3708 -3.8238 17 1 8.9827 0.9519 -3.6614 18 1 6.8551 2.1128 -3.7370 19 6 5.0228 3.9193 -1.2630 20 6 5.5710 5.2216 -0.6759 21 6 4.5306 4.4100 0.1001 22 6 3.2797 0.7517 -0.9443 23 1 2.7427 -1.3353 1.6719 24 1 6.3433 0.9225 -2.2027 25 1 4.8613 1.7263 -2.7735 26 1 10.0627 1.5034 -1.1578 27 1 4.3345 3.9972 -2.1045 28 1 6.5953 5.2137 -0.3034 29 1 5.2429 6.1562 -1.1309 30 1 3.5185 4.8110 0.1552 31 1 4.8703 3.8682 0.9827 32 1 2.7625 1.3450 -1.6838 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000876637578.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:38:02 Heat of formation + Delta-G solvation = 115.447195 kcal Electronic energy + Delta-G solvation = -19065.836448 eV Core-core repulsion = 16054.559999 eV Total energy + Delta-G solvation = -3011.276449 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 277.068 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.19553 -37.37797 -36.64640 -35.75076 -34.19259 -32.62872 -31.82200 -30.36454 -26.18152 -24.24721 -24.11139 -22.45330 -21.53339 -19.90763 -18.56692 -17.00242 -16.82457 -16.51166 -15.41120 -15.13756 -14.48066 -14.08371 -13.67663 -13.47163 -13.33501 -13.26813 -12.94108 -12.67666 -12.45578 -12.25503 -11.86877 -10.96155 -10.93393 -10.87060 -10.77527 -10.40790 -10.23807 -10.06982 -9.78526 -9.70482 -9.44168 -9.36273 -8.54477 -8.36018 -6.82579 -6.18259 -3.58642 0.62321 1.29787 2.52168 2.60193 2.94864 3.26089 3.39073 3.43244 3.82804 3.88554 4.41288 4.58162 4.72199 4.76680 4.78268 5.05498 5.16813 5.22400 5.64212 5.68049 5.77527 5.88797 5.93251 5.98729 6.26779 6.32863 6.41097 6.46564 6.54144 6.81048 7.02472 7.38563 7.84875 7.88360 8.30683 8.82201 9.54710 9.94844 10.94954 Molecular weight = 277.07amu Principal moments of inertia in cm(-1) A = 0.018207 B = 0.007914 C = 0.006517 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1537.485863 B = 3536.980311 C = 4295.186087 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.426 5.426 2 C 0.270 3.730 3 C -0.099 4.099 4 C 0.152 3.848 5 N -0.483 5.483 6 C 0.204 3.796 7 Cl 0.044 6.956 8 C -0.124 4.124 9 C 0.182 3.818 10 N -0.558 5.558 11 C -0.273 4.273 12 H 0.077 0.923 13 C 0.063 3.937 14 N -0.872 5.872 15 Si 0.847 3.153 16 H -0.287 1.287 17 H -0.292 1.292 18 H -0.261 1.261 19 C 0.116 3.884 20 C -0.181 4.181 21 C -0.220 4.220 22 C -0.016 4.016 23 H 0.165 0.835 24 H 0.079 0.921 25 H 0.055 0.945 26 H 0.264 0.736 27 H 0.088 0.912 28 H 0.106 0.894 29 H 0.077 0.923 30 H 0.073 0.927 31 H 0.086 0.914 32 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.179 -2.445 -1.203 8.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.102 5.102 2 C -0.046 4.046 3 C -0.105 4.105 4 C -0.009 4.009 5 N -0.194 5.194 6 C 0.040 3.960 7 Cl 0.073 6.927 8 C -0.131 4.131 9 C 0.055 3.945 10 N -0.275 5.275 11 C -0.401 4.401 12 H 0.095 0.905 13 C -0.141 4.141 14 N -0.509 5.509 15 Si 0.674 3.326 16 H -0.214 1.214 17 H -0.219 1.219 18 H -0.185 1.185 19 C 0.008 3.992 20 C -0.219 4.219 21 C -0.260 4.260 22 C -0.045 4.045 23 H 0.182 0.818 24 H 0.097 0.903 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.105 0.895 28 H 0.124 0.876 29 H 0.096 0.904 30 H 0.092 0.908 31 H 0.105 0.895 32 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -9.050 -3.008 -0.605 9.556 hybrid contribution 0.209 0.496 -1.419 1.517 sum -8.840 -2.512 -2.023 9.410 Atomic orbital electron populations 1.81233 1.11903 1.08777 1.08242 1.25419 0.92248 0.93404 0.93532 1.16976 0.85322 1.05872 1.02321 1.22643 0.88669 0.94506 0.95130 1.67287 1.07576 1.20934 1.23588 1.22428 0.91089 0.91709 0.90815 1.98584 1.00938 1.96303 1.96865 1.21792 0.93882 0.96845 1.00535 1.20384 0.96114 0.87052 0.90909 1.43585 1.13141 1.03208 1.67523 1.18455 0.81168 1.38689 1.01818 0.90548 1.25454 0.95108 0.96689 0.96859 1.69959 1.07689 1.37877 1.35396 0.87350 0.78532 0.77256 0.89486 1.21434 1.21858 1.18517 1.21158 0.96266 0.88417 0.93341 1.23081 1.00003 0.94030 1.04794 1.23369 0.97322 1.06310 0.99035 1.21448 0.92955 0.94406 0.95712 0.81828 0.90261 0.92639 0.92566 0.89460 0.87568 0.90419 0.90803 0.89528 0.83857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -6.20 18.54 41.84 0.78 -5.43 16 2 C 0.27 3.49 15.37 -22.47 -0.35 3.15 16 3 C -0.10 -1.27 5.75 -106.76 -0.61 -1.88 16 4 C 0.15 2.00 10.92 -17.11 -0.19 1.82 16 5 N -0.48 -7.95 10.32 -10.00 -0.10 -8.06 16 6 C 0.20 3.68 7.27 -17.35 -0.13 3.55 16 7 Cl 0.04 0.90 24.11 -51.86 -1.25 -0.35 16 8 C -0.12 -2.06 5.47 -104.50 -0.57 -2.64 16 9 C 0.18 3.34 3.51 -5.19 -0.02 3.32 16 10 N -0.56 -11.33 2.25 -167.02 -0.38 -11.71 16 11 C -0.27 -6.50 7.03 -15.06 -0.11 -6.61 16 12 H 0.08 2.06 7.38 -52.49 -0.39 1.67 16 13 C 0.06 1.54 3.79 -17.43 -0.07 1.48 16 14 N -0.87 -22.95 13.38 55.49 0.74 -22.21 16 15 Si 0.85 19.21 26.41 -169.99 -4.49 14.72 16 16 H -0.29 -6.81 7.11 56.52 0.40 -6.40 16 17 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 18 H -0.26 -5.48 5.70 56.52 0.32 -5.16 16 19 C 0.12 2.06 6.58 -67.93 -0.45 1.62 16 20 C -0.18 -3.15 9.80 -26.69 -0.26 -3.41 16 21 C -0.22 -3.72 10.36 -26.69 -0.28 -3.99 16 22 C -0.02 -0.22 9.55 -38.87 -0.37 -0.60 16 23 H 0.16 1.62 8.06 -52.49 -0.42 1.19 16 24 H 0.08 1.59 4.14 -51.93 -0.22 1.38 16 25 H 0.06 0.89 7.93 -51.93 -0.41 0.48 16 26 H 0.26 6.76 8.31 -40.82 -0.34 6.42 16 27 H 0.09 1.37 8.14 -51.93 -0.42 0.95 16 28 H 0.11 2.11 6.71 -51.93 -0.35 1.76 16 29 H 0.08 1.17 8.14 -51.93 -0.42 0.75 16 30 H 0.07 1.10 8.14 -51.93 -0.42 0.67 16 31 H 0.09 1.65 8.14 -51.93 -0.42 1.23 16 32 H 0.14 1.62 8.06 -52.49 -0.42 1.20 16 LS Contribution 293.47 15.07 4.42 4.42 Total: -1.00 -26.24 293.47 -6.78 -33.02 By element: Atomic # 1 Polarization: 2.89 SS G_CDS: -3.11 Total: -0.22 kcal Atomic # 6 Polarization: -0.80 SS G_CDS: -3.39 Total: -4.19 kcal Atomic # 7 Polarization: -48.44 SS G_CDS: 1.04 Total: -47.41 kcal Atomic # 14 Polarization: 19.21 SS G_CDS: -4.49 Total: 14.72 kcal Atomic # 17 Polarization: 0.90 SS G_CDS: -1.25 Total: -0.35 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -26.24 -6.78 -33.02 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000876637578.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.471 kcal (2) G-P(sol) polarization free energy of solvation -26.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 122.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.024 kcal (6) G-S(sol) free energy of system = (1) + (5) 115.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds