Wall clock time and date at job start Mon Mar 30 2020 01:45:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30845 * 125.95272 * 2 1 4 4 C 1.33306 * 109.81937 * 180.02562 * 3 2 1 5 5 Cl 1.73601 * 125.54321 * 180.02562 * 4 3 2 6 6 N 1.30798 * 108.91701 * 359.75064 * 4 3 2 7 7 N 1.34408 * 125.94835 * 180.02562 * 2 1 3 8 8 C 1.46502 * 126.81211 * 359.95570 * 7 2 1 9 9 C 1.50707 * 109.46794 * 90.00341 * 8 7 2 10 10 C 1.38632 * 119.74798 * 90.00171 * 9 8 7 11 11 C 1.37610 * 120.24865 * 180.02562 * 10 9 8 12 12 C 1.40716 * 119.74899 * 0.27687 * 11 10 9 13 13 C 1.41392 * 120.24802 * 179.69783 * 12 11 10 14 14 H 1.08007 * 119.99541 * 150.23496 * 13 12 11 15 15 C 1.39945 * 120.00071 * 330.23912 * 13 12 11 16 16 N 1.30822 * 119.99676 * 161.71500 * 15 13 12 17 17 Si 1.86797 * 120.00031 * 341.71640 * 15 13 12 18 18 H 1.48495 * 109.47222 * 95.41135 * 17 15 13 19 19 H 1.48503 * 109.46947 * 215.41188 * 17 15 13 20 20 H 1.48504 * 109.47122 * 335.41193 * 17 15 13 21 21 C 1.40722 * 119.50521 * 359.47220 * 12 11 10 22 22 C 1.37614 * 119.74522 * 0.50698 * 21 12 11 23 23 H 1.08998 * 109.47067 * 270.00002 * 1 2 3 24 24 H 1.09001 * 109.46755 * 29.99837 * 1 2 3 25 25 H 1.08996 * 109.47308 * 149.99789 * 1 2 3 26 26 H 1.09003 * 109.47273 * 330.01197 * 8 7 2 27 27 H 1.08995 * 109.47123 * 210.00268 * 8 7 2 28 28 H 1.08004 * 119.87387 * 359.97438 * 10 9 8 29 29 H 1.08005 * 120.13128 * 179.97438 * 11 10 9 30 30 H 0.97002 * 119.99654 * 180.02562 * 16 15 13 31 31 H 1.07997 * 120.12679 * 180.25842 * 21 12 11 32 32 H 1.08002 * 119.87887 * 179.74692 * 22 21 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2752 1.0592 0.0000 4 6 3.5558 0.6888 -0.0006 5 17 4.9177 1.7653 -0.0001 6 7 3.6193 -0.6177 0.0045 7 7 2.2961 -1.0881 -0.0005 8 6 1.8619 -2.4873 -0.0002 9 6 1.7122 -2.9670 -1.4210 10 6 2.7935 -3.5428 -2.0702 11 6 2.6684 -3.9839 -3.3676 12 6 1.4389 -3.8435 -4.0375 13 6 1.3005 -4.2872 -5.3728 14 1 0.3417 -4.6328 -5.7303 15 6 2.4058 -4.2787 -6.2311 16 7 2.3916 -4.9992 -7.3229 17 14 3.9014 -3.2387 -5.8177 18 1 4.9088 -4.0762 -5.1186 19 1 4.4897 -2.6981 -7.0694 20 1 3.4945 -2.1148 -4.9363 21 6 0.3467 -3.2624 -3.3668 22 6 0.4945 -2.8288 -2.0692 23 1 -0.3633 0.0000 1.0276 24 1 -0.3633 0.8900 -0.5138 25 1 -0.3634 -0.8899 -0.5138 26 1 0.9044 -2.5705 0.5140 27 1 2.6045 -3.0980 0.5132 28 1 3.7377 -3.6447 -1.5559 29 1 3.5121 -4.4318 -3.8717 30 1 3.1579 -4.9936 -7.9177 31 1 -0.6027 -3.1535 -3.8699 32 1 -0.3411 -2.3788 -1.5538 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000918560931.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:45:18 Heat of formation + Delta-G solvation = 94.372004 kcal Electronic energy + Delta-G solvation = -18469.875944 eV Core-core repulsion = 15457.685606 eV Total energy + Delta-G solvation = -3012.190338 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 277.068 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -42.00902 -38.16458 -36.88970 -34.69620 -33.35454 -32.53383 -30.78251 -29.92429 -28.38633 -27.02749 -24.05399 -22.15161 -21.43837 -20.89926 -20.01074 -17.65341 -17.03082 -16.31160 -15.67624 -15.17507 -14.50960 -14.24954 -14.11950 -14.08466 -13.19795 -13.10159 -12.89136 -12.51421 -12.36976 -12.20565 -11.96030 -11.54763 -11.50248 -11.37649 -10.93230 -10.91094 -10.42867 -10.17284 -9.95041 -9.73437 -9.57750 -9.30839 -9.12799 -7.91866 -7.79372 -7.14691 -4.69114 1.32792 1.65692 2.17853 2.53274 2.82014 2.85640 3.04252 3.13742 3.24169 3.85558 4.23419 4.38266 4.65197 5.08717 5.21399 5.33418 5.40382 5.52157 5.58880 5.68670 5.87581 5.95180 6.08366 6.32096 6.39574 6.64760 6.68778 6.89782 6.97684 7.22557 7.34383 7.53871 7.68952 7.91743 8.04463 8.15577 8.44957 8.60064 9.86268 Molecular weight = 277.07amu Principal moments of inertia in cm(-1) A = 0.019757 B = 0.005443 C = 0.004654 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1416.885820 B = 5142.597044 C = 6015.495367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.289 3.711 3 N -0.542 5.542 4 C 0.257 3.743 5 Cl 0.037 6.963 6 N -0.293 5.293 7 N -0.345 5.345 8 C 0.186 3.814 9 C -0.263 4.263 10 C -0.042 4.042 11 C -0.242 4.242 12 C 0.101 3.899 13 C -0.437 4.437 14 H 0.094 0.906 15 C 0.085 3.915 16 N -0.796 5.796 17 Si 0.912 3.088 18 H -0.268 1.268 19 H -0.288 1.288 20 H -0.245 1.245 21 C -0.212 4.212 22 C -0.061 4.061 23 H 0.090 0.910 24 H 0.097 0.903 25 H 0.091 0.909 26 H 0.096 0.904 27 H 0.094 0.906 28 H 0.096 0.904 29 H 0.102 0.898 30 H 0.289 0.711 31 H 0.103 0.897 32 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.185 6.874 12.139 14.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.013 3.987 3 N -0.273 5.273 4 C -0.050 4.050 5 Cl 0.064 6.936 6 N -0.126 5.126 7 N -0.136 5.136 8 C 0.067 3.933 9 C -0.265 4.265 10 C -0.061 4.061 11 C -0.261 4.261 12 C 0.097 3.903 13 C -0.464 4.464 14 H 0.112 0.888 15 C -0.136 4.136 16 N -0.419 5.419 17 Si 0.738 3.262 18 H -0.194 1.194 19 H -0.215 1.215 20 H -0.168 1.168 21 C -0.231 4.231 22 C -0.080 4.080 23 H 0.108 0.892 24 H 0.116 0.884 25 H 0.109 0.891 26 H 0.115 0.885 27 H 0.112 0.888 28 H 0.114 0.886 29 H 0.119 0.881 30 H 0.099 0.901 31 H 0.121 0.879 32 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.464 6.688 11.890 13.650 hybrid contribution 0.838 0.324 -0.173 0.915 sum 0.374 7.012 11.717 13.660 Atomic orbital electron populations 1.20511 0.83593 1.05610 1.04226 1.24169 0.96643 0.81961 0.95907 1.70077 1.00032 1.30099 1.27130 1.23896 0.89328 0.88279 1.03491 1.98389 1.37322 1.60779 1.97079 1.78108 0.98930 1.09559 1.26007 1.51037 1.02240 1.08576 1.51791 1.20638 1.00213 0.75385 0.97015 1.18947 0.96163 1.15842 0.95597 1.20462 0.95954 0.95169 0.94484 1.21022 0.98960 1.10867 0.95297 1.17791 0.91221 0.87929 0.93350 1.19627 0.97893 1.34792 0.94122 0.88812 1.26215 0.99737 0.93490 0.94164 1.69684 1.31744 1.29646 1.10797 0.86291 0.80080 0.81888 0.77938 1.19404 1.21500 1.16792 1.20981 0.99467 1.07300 0.95352 1.20494 0.94957 0.97909 0.94640 0.89162 0.88416 0.89090 0.88539 0.88763 0.88634 0.88050 0.90071 0.87863 0.88622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.82 10.00 36.01 0.36 -0.46 16 2 C 0.29 4.42 7.98 -155.70 -1.24 3.17 16 3 N -0.54 -9.35 11.19 -9.08 -0.10 -9.45 16 4 C 0.26 4.53 8.84 -91.68 -0.81 3.72 16 5 Cl 0.04 0.54 29.33 -51.86 -1.52 -0.98 16 6 N -0.29 -5.42 12.70 31.67 0.40 -5.01 16 7 N -0.35 -5.69 3.62 -59.51 -0.22 -5.91 16 8 C 0.19 2.71 6.24 -5.19 -0.03 2.68 16 9 C -0.26 -4.83 5.49 -104.33 -0.57 -5.40 16 10 C -0.04 -0.87 9.67 -39.66 -0.38 -1.25 16 11 C -0.24 -5.65 7.18 -38.88 -0.28 -5.93 16 12 C 0.10 2.43 5.11 -106.82 -0.55 1.88 16 13 C -0.44 -11.31 9.57 -37.74 -0.36 -11.67 16 14 H 0.09 2.51 8.06 -52.48 -0.42 2.09 16 15 C 0.08 2.16 5.40 -17.34 -0.09 2.06 16 16 N -0.80 -20.46 13.93 55.55 0.77 -19.69 16 17 Si 0.91 20.78 24.52 -169.99 -4.17 16.61 16 18 H -0.27 -5.95 6.71 56.52 0.38 -5.57 16 19 H -0.29 -6.31 7.11 56.52 0.40 -5.91 16 20 H -0.24 -5.90 6.86 56.52 0.39 -5.51 16 21 C -0.21 -4.53 9.80 -38.87 -0.38 -4.91 16 22 C -0.06 -1.12 9.45 -39.66 -0.37 -1.50 16 23 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.10 0.93 8.14 -51.93 -0.42 0.51 16 25 H 0.09 0.88 5.41 -51.93 -0.28 0.60 16 26 H 0.10 1.06 7.65 -51.93 -0.40 0.66 16 27 H 0.09 1.29 8.08 -51.93 -0.42 0.87 16 28 H 0.10 1.85 8.06 -52.48 -0.42 1.42 16 29 H 0.10 2.39 4.73 -52.48 -0.25 2.15 16 30 H 0.29 6.72 8.30 -40.82 -0.34 6.38 16 31 H 0.10 2.07 8.06 -52.49 -0.42 1.65 16 32 H 0.10 1.39 6.00 -52.49 -0.31 1.07 16 LS Contribution 291.32 15.07 4.39 4.39 Total: -1.00 -28.87 291.32 -8.10 -36.97 By element: Atomic # 1 Polarization: 3.63 SS G_CDS: -2.95 Total: 0.68 kcal Atomic # 6 Polarization: -12.89 SS G_CDS: -4.72 Total: -17.61 kcal Atomic # 7 Polarization: -40.93 SS G_CDS: 0.86 Total: -40.07 kcal Atomic # 14 Polarization: 20.78 SS G_CDS: -4.17 Total: 16.61 kcal Atomic # 17 Polarization: 0.54 SS G_CDS: -1.52 Total: -0.98 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -28.87 -8.10 -36.97 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000918560931.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.346 kcal (2) G-P(sol) polarization free energy of solvation -28.872 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.102 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.974 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds