Wall clock time and date at job start Mon Mar 30 2020 01:43:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.39211 * 119.48655 * 2 1 4 4 C 1.36420 * 120.90027 * 179.97438 * 3 2 1 5 5 C 1.39898 * 119.51363 * 359.74512 * 4 3 2 6 6 C 1.41671 * 119.67883 * 0.49986 * 5 4 3 7 7 C 1.36334 * 119.49040 * 179.97438 * 2 1 3 8 8 N 1.34095 * 118.72492 * 179.72052 * 6 5 4 9 9 C 1.31382 * 120.46753 * 359.74657 * 8 6 5 10 10 Cl 1.73603 * 118.52785 * 179.97438 * 9 8 6 11 11 N 1.32377 * 122.94416 * 0.02562 * 9 8 6 12 12 C 1.32734 * 121.47474 * 0.02562 * 11 9 8 13 13 N 1.37834 * 120.90219 * 179.97438 * 12 11 9 14 14 C 1.46496 * 120.00367 * 89.25848 * 13 12 11 15 15 C 1.36834 * 119.99586 * 269.25270 * 13 12 11 16 16 H 1.08000 * 120.00450 * 0.46798 * 15 13 12 17 17 C 1.38928 * 120.00284 * 180.46648 * 15 13 12 18 18 N 1.31475 * 119.99623 * 344.20990 * 17 15 13 19 19 Si 1.86789 * 120.00377 * 164.20382 * 17 15 13 20 20 H 1.48495 * 109.47137 * 90.00242 * 19 17 15 21 21 H 1.48504 * 109.47411 * 210.00101 * 19 17 15 22 22 H 1.48502 * 109.47407 * 330.00044 * 19 17 15 23 23 H 1.09001 * 109.47491 * 270.02240 * 1 2 3 24 24 H 1.09008 * 109.47163 * 30.02278 * 1 2 3 25 25 H 1.09002 * 109.47218 * 150.01961 * 1 2 3 26 26 H 1.07999 * 119.54777 * 0.02562 * 3 2 1 27 27 H 1.08006 * 120.24560 * 179.97438 * 4 3 2 28 28 H 1.08007 * 120.20835 * 0.05071 * 7 2 1 29 29 H 1.09003 * 109.47188 * 5.34109 * 14 13 12 30 30 H 1.08996 * 109.47511 * 125.34032 * 14 13 12 31 31 H 1.08996 * 109.46902 * 245.34613 * 14 13 12 32 32 H 0.96998 * 120.00149 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1922 1.2118 0.0000 4 6 3.5560 1.2454 0.0005 5 6 4.2750 0.0454 0.0065 6 6 3.5797 -1.1890 0.0012 7 6 2.1781 -1.1867 0.0005 8 7 4.2879 -2.3276 0.0013 9 6 5.6014 -2.2951 0.0013 10 17 6.4679 -3.7995 0.0021 11 7 6.2936 -1.1668 0.0016 12 6 5.6911 0.0159 0.0025 13 7 6.4235 1.1835 0.0034 14 6 6.8267 1.7963 -1.2647 15 6 6.7740 1.7703 1.1888 16 1 6.4832 1.3146 2.1238 17 6 7.5040 2.9524 1.1897 18 7 8.1213 3.3445 0.0972 19 14 7.6082 3.9845 2.7430 20 1 8.7791 3.5518 3.5472 21 1 7.7608 5.4157 2.3771 22 1 6.3676 3.8069 3.5397 23 1 -0.3634 0.0004 1.0277 24 1 -0.3634 0.8898 -0.5142 25 1 -0.3634 -0.8902 -0.5135 26 1 1.6365 2.1379 0.0004 27 1 4.0768 2.1916 0.0001 28 1 1.6331 -2.1192 0.0001 29 1 6.3804 1.2454 -2.0926 30 1 6.4870 2.8316 -1.2922 31 1 7.9127 1.7678 -1.3529 32 1 8.6313 4.1696 0.0979 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166799685.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:43:25 Heat of formation + Delta-G solvation = 91.370943 kcal Electronic energy + Delta-G solvation = -18840.683251 eV Core-core repulsion = 15828.362778 eV Total energy + Delta-G solvation = -3012.320474 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 277.068 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.88515 -37.80639 -36.67697 -36.00022 -33.13755 -32.47260 -31.03827 -29.58386 -27.51912 -26.30600 -24.52541 -23.56486 -22.13113 -21.02047 -18.15858 -17.73424 -17.21893 -16.32600 -15.23894 -14.86756 -14.75330 -14.16968 -13.85965 -13.70194 -13.63996 -13.25001 -12.52537 -12.23787 -12.05408 -12.00253 -11.48855 -11.37411 -11.10610 -11.02454 -10.87600 -10.72343 -10.46832 -10.44053 -10.21402 -10.13273 -8.97332 -8.74319 -8.67107 -7.93854 -7.55867 -6.02123 -3.50989 0.58057 1.02915 1.83656 2.23801 3.20379 3.24615 3.31238 3.33401 4.04841 4.36945 4.45227 4.66635 4.83073 4.97548 5.09742 5.25791 5.26683 5.44491 5.53381 5.57852 5.81140 5.85525 6.01362 6.24055 6.37826 6.43196 6.63934 6.68463 6.97300 7.19681 7.43951 7.50856 7.60399 8.00975 8.46829 8.84149 9.49241 9.80144 10.98100 Molecular weight = 277.07amu Principal moments of inertia in cm(-1) A = 0.013458 B = 0.007406 C = 0.005294 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2079.998965 B = 3779.936600 C = 5287.499093 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.045 4.045 3 C -0.147 4.147 4 C -0.027 4.027 5 C -0.177 4.177 6 C 0.180 3.820 7 C -0.122 4.122 8 N -0.528 5.528 9 C 0.388 3.612 10 Cl -0.007 7.007 11 N -0.549 5.549 12 C 0.530 3.470 13 N -0.547 5.547 14 C 0.167 3.833 15 C -0.273 4.273 16 H 0.080 0.920 17 C 0.019 3.981 18 N -0.899 5.899 19 Si 0.917 3.083 20 H -0.283 1.283 21 H -0.284 1.284 22 H -0.276 1.276 23 H 0.073 0.927 24 H 0.069 0.931 25 H 0.068 0.932 26 H 0.127 0.873 27 H 0.147 0.853 28 H 0.134 0.866 29 H 0.000 1.000 30 H 0.057 0.943 31 H 0.061 0.939 32 H 0.259 0.741 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.887 -4.665 -1.654 12.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.048 4.048 3 C -0.165 4.165 4 C -0.047 4.047 5 C -0.186 4.186 6 C 0.053 3.947 7 C -0.141 4.141 8 N -0.247 5.247 9 C 0.092 3.908 10 Cl 0.021 6.979 11 N -0.272 5.272 12 C 0.282 3.718 13 N -0.267 5.267 14 C 0.025 3.975 15 C -0.400 4.400 16 H 0.098 0.902 17 C -0.181 4.181 18 N -0.542 5.542 19 Si 0.745 3.255 20 H -0.210 1.210 21 H -0.210 1.210 22 H -0.201 1.201 23 H 0.092 0.908 24 H 0.088 0.912 25 H 0.087 0.913 26 H 0.145 0.855 27 H 0.165 0.835 28 H 0.152 0.848 29 H 0.019 0.981 30 H 0.076 0.924 31 H 0.080 0.920 32 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -11.242 -5.529 -1.710 12.645 hybrid contribution 0.130 0.955 0.832 1.273 sum -11.113 -4.574 -0.878 12.049 Atomic orbital electron populations 1.20860 0.90796 1.02965 1.02589 1.19722 0.96280 0.92777 0.95991 1.20856 0.94322 0.97470 1.03837 1.21111 0.93471 0.98047 0.92108 1.20249 0.96250 0.95371 1.06708 1.18695 0.94075 0.86888 0.95074 1.20380 0.90825 0.98328 1.04540 1.68115 1.06672 1.30431 1.19484 1.22917 0.86176 0.87938 0.93807 1.98384 1.75210 1.28137 1.96176 1.68417 1.43079 0.97873 1.17785 1.18816 0.87462 0.86083 0.79463 1.41644 1.61124 1.18020 1.05943 1.21265 1.00177 0.95388 0.80679 1.19146 1.32996 1.04143 0.83691 0.90186 1.24879 0.97076 0.98163 0.97994 1.70157 1.32989 1.23959 1.27078 0.86073 0.78330 0.79409 0.81679 1.20961 1.21013 1.20107 0.90798 0.91210 0.91333 0.85482 0.83500 0.84814 0.98111 0.92446 0.92033 0.92995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 23. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.03 9.98 36.00 0.36 -0.67 16 2 C -0.04 -0.58 5.85 -104.95 -0.61 -1.19 16 3 C -0.15 -2.05 9.59 -39.88 -0.38 -2.43 16 4 C -0.03 -0.47 9.58 -39.62 -0.38 -0.85 16 5 C -0.18 -3.56 5.76 -106.67 -0.61 -4.17 16 6 C 0.18 3.38 6.61 -84.85 -0.56 2.82 16 7 C -0.12 -1.83 9.61 -39.55 -0.38 -2.21 16 8 N -0.53 -10.45 10.40 -9.72 -0.10 -10.55 16 9 C 0.39 8.05 8.15 -92.00 -0.75 7.30 16 10 Cl -0.01 -0.12 29.24 -51.86 -1.52 -1.63 16 11 N -0.55 -12.73 10.38 -10.59 -0.11 -12.84 16 12 C 0.53 12.21 6.03 -154.90 -0.93 11.27 16 13 N -0.55 -13.50 2.29 -121.90 -0.28 -13.78 16 14 C 0.17 3.96 8.96 59.84 0.54 4.50 16 15 C -0.27 -7.17 9.76 -15.06 -0.15 -7.32 16 16 H 0.08 2.13 7.88 -52.49 -0.41 1.71 16 17 C 0.02 0.48 5.32 -17.45 -0.09 0.39 16 18 N -0.90 -24.01 9.74 55.50 0.54 -23.46 16 19 Si 0.92 20.51 29.58 -169.99 -5.03 15.48 16 20 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 21 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 22 H -0.28 -6.06 7.11 56.52 0.40 -5.65 16 23 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.07 0.53 8.08 -51.92 -0.42 0.11 16 25 H 0.07 0.54 8.07 -51.93 -0.42 0.12 16 26 H 0.13 1.41 8.06 -52.49 -0.42 0.99 16 27 H 0.15 2.70 7.66 -52.48 -0.40 2.30 16 28 H 0.13 1.75 8.06 -52.48 -0.42 1.32 16 29 H 0.00 0.00 7.90 -51.93 -0.41 -0.41 16 30 H 0.06 1.37 7.17 -51.93 -0.37 1.00 16 31 H 0.06 1.60 7.01 -51.93 -0.36 1.23 16 32 H 0.26 6.67 8.31 -40.82 -0.34 6.33 16 LS Contribution 294.49 15.07 4.44 4.44 Total: -1.00 -28.41 294.49 -9.22 -37.63 By element: Atomic # 1 Polarization: 0.49 SS G_CDS: -3.20 Total: -2.71 kcal Atomic # 6 Polarization: 11.39 SS G_CDS: -3.96 Total: 7.43 kcal Atomic # 7 Polarization: -60.69 SS G_CDS: 0.05 Total: -60.64 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.03 Total: 15.48 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.52 Total: -1.63 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -28.41 -9.22 -37.63 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166799685.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.004 kcal (2) G-P(sol) polarization free energy of solvation -28.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.591 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.633 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds